EnhancerDB
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  3. vista3028[chr1:115713702-115714032]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3028[chr1:115713702-115714032]
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Tissue distribution of vista3028
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Transcription factor that possibly regulate vista3028[chr1:115713702-115714032]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 115713696 115713711 RUNX2 JASPAR yes 31713902
chr1 115713696 115713711 RUNX2 JASPAR yes 118355235
chr1 115713697 115713702 ETS2 TRANSFAC yes 31713903
chr1 115713697 115713702 ETS2 TRANSFAC yes 118355236
chr1 115713726 115713730 YY1 TRANSFAC yes 31713904
chr1 115713726 115713730 YY1 TRANSFAC yes 118355237
chr1 115713727 115713742 LEF1 JASPAR yes 31713905
chr1 115713727 115713742 LEF1 JASPAR yes 118355238
chr1 115713728 115713742 TCF7L2 JASPAR yes 31713906
chr1 115713728 115713742 TCF7L2 JASPAR yes 118355239
chr1 115713731 115713737 LEF1 TRANSFAC yes 31713907
chr1 115713731 115713737 TCF4 TRANSFAC yes 31713908
chr1 115713731 115713737 LEF1 TRANSFAC yes 118355240
chr1 115713731 115713737 TCF4 TRANSFAC yes 118355241
chr1 115713732 115713744 PBX1 JASPAR yes 31713909
chr1 115713732 115713744 PBX1 JASPAR yes 118355242
chr1 115713748 115713759 ESRRA JASPAR yes 31713910
chr1 115713748 115713759 ESRRB JASPAR yes 31713911
chr1 115713748 115713759 ESRRA JASPAR yes 118355243
chr1 115713748 115713759 ESRRB JASPAR yes 118355244
chr1 115713749 115713769 PPARG JASPAR yes 31713912
chr1 115713749 115713769 PPARG JASPAR yes 118355245
chr1 115713752 115713756 ESR1 TRANSFAC yes 31713913
chr1 115713752 115713756 ESR1 TRANSFAC yes 118355246
chr1 115713764 115713769 ETS2 TRANSFAC yes 31713914
chr1 115713764 115713769 ETS2 TRANSFAC yes 118355247
chr1 115713769 115713781 BHLHE23 JASPAR yes 31713915
chr1 115713769 115713781 BHLHE23 JASPAR yes 118355248
chr1 115713770 115713780 BHLHE22 JASPAR yes 31713916
chr1 115713770 115713780 NEUROD2 JASPAR yes 31713917
chr1 115713770 115713780 OLIG1 JASPAR yes 31713918
chr1 115713770 115713780 OLIG2 JASPAR yes 31713919
chr1 115713770 115713780 OLIG3 JASPAR yes 31713920
chr1 115713770 115713780 BHLHE22 JASPAR yes 118355249
chr1 115713770 115713780 NEUROD2 JASPAR yes 118355250
chr1 115713770 115713780 OLIG1 JASPAR yes 118355251
chr1 115713770 115713780 OLIG2 JASPAR yes 118355252
chr1 115713770 115713780 OLIG3 JASPAR yes 118355253
chr1 115713800 115713803 MYB TRANSFAC yes 31713921
chr1 115713800 115713803 MYB TRANSFAC yes 118355254
chr1 115713800 115713812 YY1 JASPAR yes 31713922
chr1 115713800 115713812 YY1 JASPAR yes 118355255
chr1 115713826 115713832 JUN TRANSFAC yes 31713923
chr1 115713826 115713832 JUN TRANSFAC yes 118355256
chr1 115713847 115713868 ZNF263 JASPAR yes 31713924
chr1 115713847 115713868 ZNF263 JASPAR yes 118355257
chr1 115713849 115713855 HiNF-A TRANSFAC yes 31713925
chr1 115713849 115713855 HiNF-A TRANSFAC yes 118355258
chr1 115713854 115713859 TFAP2A TRANSFAC yes 31713926
chr1 115713854 115713859 TFAP2A TRANSFAC yes 118355259
chr1 115713854 115713860 MZF1 JASPAR yes 31713927
chr1 115713854 115713860 MZF1 JASPAR yes 118355260
chr1 115713893 115713904 CEBPB JASPAR yes 31713928
chr1 115713893 115713904 CEBPB JASPAR yes 118355261
chr1 115713894 115713905 CEBPA JASPAR yes 31713929
chr1 115713894 115713905 CEBPA JASPAR yes 118355262
chr1 115713900 115713903 MYB TRANSFAC yes 31713930
chr1 115713900 115713903 MYB TRANSFAC yes 118355263
chr1 115713929 115713933 YY1 TRANSFAC yes 31713931
chr1 115713929 115713933 YY1 TRANSFAC yes 118355264
chr1 115713944 115713948 YY1 TRANSFAC yes 31713932
chr1 115713944 115713948 YY1 TRANSFAC yes 118355265
chr1 115713944 115713954 HOXA13 JASPAR yes 31713933
chr1 115713944 115713954 HOXB13 JASPAR yes 31713934
chr1 115713944 115713954 HOXD13 JASPAR yes 31713935
chr1 115713944 115713954 HOXA13 JASPAR yes 118355266
chr1 115713944 115713954 HOXB13 JASPAR yes 118355267
chr1 115713944 115713954 HOXD13 JASPAR yes 118355268
chr1 115713944 115713959 STAT1 JASPAR yes 31713936
chr1 115713944 115713959 STAT1 JASPAR yes 118355269
chr1 115713951 115713965 JUN JASPAR yes 31713937
chr1 115713951 115713965 JUN JASPAR yes 118355270
chr1 115713955 115713966 FOS JASPAR yes 31713938
chr1 115713955 115713966 JUND JASPAR yes 31713939
chr1 115713955 115713966 FOS JASPAR yes 118355271
chr1 115713955 115713966 JUND JASPAR yes 118355272
chr1 115713956 115713967 FOSL2 JASPAR yes 31713940
chr1 115713956 115713967 JUNB JASPAR yes 31713941
chr1 115713956 115713967 FOSL2 JASPAR yes 118355273
chr1 115713956 115713967 JUNB JASPAR yes 118355274
chr1 115713957 115713963 JUN TRANSFAC yes 31713942
chr1 115713957 115713963 JUN TRANSFAC yes 118355275
chr1 115713995 115714004 SRY JASPAR yes 31713943
chr1 115713995 115714004 SRY JASPAR yes 118355276
chr1 115713999 115714005 SOX10 JASPAR yes 31713944
chr1 115713999 115714005 SOX10 JASPAR yes 118355277
chr1 115714021 115714031 GSC2 JASPAR yes 31713945
chr1 115714021 115714031 GSC2 JASPAR yes 118355278
chr1 115714022 115714030 OTX2 JASPAR yes 31713946
chr1 115714022 115714030 OTX2 JASPAR yes 118355279
SNP sites on vista3028[chr1:115713702-115714032]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 115713717 rs375983090 C T no 578275
chr1 115713738 rs1573184 T C
LEF1 PBX1 TCF7L2
578276
chr1 115713775 rs145794114 T C
BHLHE22 BHLHE23 NEUROD2 OLIG1 OLIG2 OLIG3
578277
chr1 115713794 rs546088870 GAGCTCATAACATGGC G no 578278
chr1 115713872 rs6678822 C T no 578279
Genes possibly regulated by vista3028[chr1:115713702-115714032]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 115590632 115632121 - TSPAN2 ENSG00000134198.5 115632121 0.89 0.99 1052 18419
Expression level of Genes
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miRNAs possibly regulated by vista3028[chr1:115713702-115714032]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results