EnhancerDB
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  3. vista303[chr1:9488839-9489227]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista303[chr1:9488839-9489227]
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Tissue distribution of vista303
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Transcription factor that possibly regulate vista303[chr1:9488839-9489227]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 9488879 9488898 CTCF JASPAR yes 26649443
chr1 9488879 9488898 CTCF JASPAR yes 118227500
chr1 9488930 9488944 ZIC1 JASPAR yes 26649444
chr1 9488930 9488944 ZIC1 JASPAR yes 118227501
chr1 9488930 9488945 ZIC3 JASPAR yes 26649445
chr1 9488930 9488945 ZIC3 JASPAR yes 118227502
chr1 9488943 9488954 NRF1 JASPAR yes 26649446
chr1 9488943 9488954 NRF1 JASPAR yes 118227503
chr1 9488944 9488955 NRF1 JASPAR yes 26649447
chr1 9488944 9488955 NRF1 JASPAR yes 118227504
chr1 9488945 9488953 NRF1 TRANSFAC yes 26649448
chr1 9488945 9488953 NRF1 TRANSFAC yes 118227505
chr1 9489012 9489026 ATF7 JASPAR yes 26649449
chr1 9489012 9489026 ATF7 JASPAR yes 118227506
chr1 9489013 9489025 DBP JASPAR yes 26649450
chr1 9489013 9489025 JDP2 JASPAR yes 26649451
chr1 9489013 9489025 DBP JASPAR yes 118227507
chr1 9489013 9489025 JDP2 JASPAR yes 118227508
chr1 9489013 9489026 ATF4 JASPAR yes 26649452
chr1 9489013 9489026 ATF4 JASPAR yes 118227509
chr1 9489015 9489022 JUN TRANSFAC yes 26649453
chr1 9489015 9489022 JUN TRANSFAC yes 118227510
chr1 9489015 9489023 CREB1 JASPAR yes 26649454
chr1 9489015 9489023 GMEB2 JASPAR yes 26649455
chr1 9489015 9489023 CREB1 JASPAR yes 118227511
chr1 9489015 9489023 GMEB2 JASPAR yes 118227512
chr1 9489016 9489028 CREB1 JASPAR yes 26649456
chr1 9489016 9489028 CREB1 JASPAR yes 118227513
chr1 9489017 9489022 ATF1 TRANSFAC yes 26649457
chr1 9489017 9489022 ATF1 TRANSFAC yes 118227514
chr1 9489028 9489043 ZIC3 JASPAR yes 26649458
chr1 9489028 9489043 ZIC3 JASPAR yes 118227515
chr1 9489037 9489052 JUND JASPAR yes 26649459
chr1 9489037 9489052 JUND JASPAR yes 118227516
chr1 9489038 9489051 JUN JASPAR yes 26649460
chr1 9489038 9489051 JUN JASPAR yes 118227517
chr1 9489038 9489052 XBP1 JASPAR yes 26649461
chr1 9489038 9489052 XBP1 JASPAR yes 118227518
chr1 9489039 9489053 ATF7 JASPAR yes 26649462
chr1 9489039 9489053 BATF3 JASPAR yes 26649463
chr1 9489039 9489053 CREB3 JASPAR yes 26649464
chr1 9489039 9489053 ATF7 JASPAR yes 118227519
chr1 9489039 9489053 BATF3 JASPAR yes 118227520
chr1 9489039 9489053 CREB3 JASPAR yes 118227521
chr1 9489040 9489052 HLF JASPAR yes 26649465
chr1 9489040 9489052 JDP2 JASPAR yes 26649466
chr1 9489040 9489052 HLF JASPAR yes 118227522
chr1 9489040 9489052 JDP2 JASPAR yes 118227523
chr1 9489040 9489053 ATF4 JASPAR yes 26649467
chr1 9489040 9489053 ATF4 JASPAR yes 118227524
chr1 9489040 9489055 JUND JASPAR yes 26649468
chr1 9489040 9489055 JUND JASPAR yes 118227525
chr1 9489041 9489054 JUN JASPAR yes 26649469
chr1 9489041 9489054 JUN JASPAR yes 118227526
chr1 9489042 9489047 ATF1 TRANSFAC yes 26649470
chr1 9489042 9489047 ATF1 TRANSFAC yes 118227527
chr1 9489042 9489050 CREB1 JASPAR yes 26649471
chr1 9489042 9489050 CREB1 JASPAR yes 118227528
chr1 9489044 9489049 ATF1 TRANSFAC yes 26649472
chr1 9489044 9489049 ATF1 TRANSFAC yes 118227529
chr1 9489068 9489072 H4TF2 TRANSFAC yes 26649473
chr1 9489068 9489072 H4TF2 TRANSFAC yes 118227530
chr1 9489097 9489116 RFX2 JASPAR yes 26649474
chr1 9489097 9489116 RFX2 JASPAR yes 118227531
chr1 9489101 9489117 RFX2 JASPAR yes 26649475
chr1 9489101 9489117 RFX3 JASPAR yes 26649476
chr1 9489101 9489117 RFX4 JASPAR yes 26649477
chr1 9489101 9489117 RFX5 JASPAR yes 26649478
chr1 9489101 9489117 RFX2 JASPAR yes 118227532
chr1 9489101 9489117 RFX3 JASPAR yes 118227533
chr1 9489101 9489117 RFX4 JASPAR yes 118227534
chr1 9489101 9489117 RFX5 JASPAR yes 118227535
chr1 9489125 9489134 SP1 TRANSFAC yes 26649479
chr1 9489125 9489134 SP1 TRANSFAC yes 118227536
chr1 9489126 9489132 SP1 TRANSFAC yes 26649480
chr1 9489126 9489132 SP1 TRANSFAC yes 118227537
chr1 9489126 9489136 SP1 JASPAR yes 26649481
chr1 9489126 9489136 SP1 JASPAR yes 118227538
chr1 9489127 9489134 SP1 TRANSFAC yes 26649482
chr1 9489127 9489134 SP1 TRANSFAC yes 118227539
chr1 9489128 9489133 SP1 TRANSFAC yes 26649483
chr1 9489128 9489133 SP1 TRANSFAC yes 118227540
chr1 9489128 9489134 SP1 TRANSFAC yes 26649484
chr1 9489128 9489134 SP1 TRANSFAC yes 118227541
chr1 9489128 9489135 SP1 TRANSFAC yes 26649485
chr1 9489128 9489135 SP1 TRANSFAC yes 118227542
chr1 9489129 9489142 TFAP2A JASPAR yes 26649486
chr1 9489129 9489142 TFAP2B JASPAR yes 26649487
chr1 9489129 9489142 TFAP2C JASPAR yes 26649488
chr1 9489129 9489142 TFAP2A JASPAR yes 118227543
chr1 9489129 9489142 TFAP2B JASPAR yes 118227544
chr1 9489129 9489142 TFAP2C JASPAR yes 118227545
chr1 9489131 9489142 TFAP2A JASPAR yes 26649489
chr1 9489131 9489142 TFAP2B JASPAR yes 26649490
chr1 9489131 9489142 TFAP2A JASPAR yes 118227546
chr1 9489131 9489142 TFAP2B JASPAR yes 118227547
chr1 9489132 9489141 TFAP2A JASPAR yes 26649491
chr1 9489132 9489141 TFAP2A JASPAR yes 118227548
chr1 9489135 9489156 ZNF263 JASPAR yes 26649492
chr1 9489135 9489156 ZNF263 JASPAR yes 118227549
chr1 9489137 9489142 SP1 TRANSFAC yes 26649493
chr1 9489137 9489142 SP1 TRANSFAC yes 118227550
chr1 9489138 9489143 SP1 TRANSFAC yes 26649494
chr1 9489138 9489143 SP1 TRANSFAC yes 118227551
chr1 9489143 9489148 NFY TRANSFAC yes 26649495
chr1 9489143 9489148 NFY TRANSFAC yes 118227552
chr1 9489147 9489153 PEA3 TRANSFAC yes 26649496
chr1 9489147 9489153 PEA3 TRANSFAC yes 118227553
chr1 9489158 9489170 PKNOX1 JASPAR yes 26649497
chr1 9489158 9489170 PKNOX2 JASPAR yes 26649498
chr1 9489158 9489170 TGIF1 JASPAR yes 26649499
chr1 9489158 9489170 TGIF2 JASPAR yes 26649500
chr1 9489158 9489170 PKNOX1 JASPAR yes 118227554
chr1 9489158 9489170 PKNOX2 JASPAR yes 118227555
chr1 9489158 9489170 TGIF1 JASPAR yes 118227556
chr1 9489158 9489170 TGIF2 JASPAR yes 118227557
chr1 9489159 9489169 TFAP4 JASPAR yes 26649501
chr1 9489159 9489169 TFAP4 JASPAR yes 118227558
chr1 9489171 9489185 CREB3 JASPAR yes 26649502
chr1 9489171 9489185 CREB3 JASPAR yes 118227559
chr1 9489172 9489186 XBP1 JASPAR yes 26649503
chr1 9489172 9489186 XBP1 JASPAR yes 118227560
chr1 9489173 9489181 ATF2 TRANSFAC yes 26649504
chr1 9489173 9489181 ATF2 TRANSFAC yes 118227561
chr1 9489174 9489179 ATF1 TRANSFAC yes 26649505
chr1 9489174 9489179 ATF1 TRANSFAC yes 118227562
chr1 9489183 9489198 ZBTB33 JASPAR yes 26649506
chr1 9489183 9489198 ZBTB33 JASPAR yes 118227563
chr1 9489188 9489199 E2F1 JASPAR yes 26649507
chr1 9489188 9489199 E2F1 JASPAR yes 118227564
chr1 9489189 9489200 E2F4 JASPAR yes 26649508
chr1 9489189 9489200 E2F6 JASPAR yes 26649509
chr1 9489189 9489200 E2F4 JASPAR yes 118227565
chr1 9489189 9489200 E2F6 JASPAR yes 118227566
chr1 9489227 9489231 YY1 TRANSFAC yes 26649510
chr1 9489227 9489231 YY1 TRANSFAC yes 118227567
SNP sites on vista303[chr1:9488839-9489227]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 9488937 rs146343131 C T
ZIC1 ZIC3
65366
chr1 9489040 rs61784972 G A,T
ATF4 ATF7 BATF3 CREB3 HLF JDP2 JUN JUND XBP1 ZIC3
65367
chr1 9489052 rs115541340 C G
ATF4 ATF7 BATF3 CREB3 HLF JDP2 JUN JUND XBP1
65368
chr1 9489124 rs149627064 C A no 65369
chr1 9489137 rs144339705 G A
SP1 TFAP2A TFAP2B TFAP2C ZNF263
65370
chr1 9489161 rs11121410 A T
PKNOX1 PKNOX2 TFAP4 TGIF1 TGIF2
65371
chr1 9489201 rs189008329 C G no 65372
chr1 9489206 rs117983024 T C no 65373
chr1 9489212 rs11121411 G A no 65374
Genes possibly regulated by vista303[chr1:9488839-9489227]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista303[chr1:9488839-9489227]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results