EnhancerDB
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  3. vista3038[chr1:116191587-116191760]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3038[chr1:116191587-116191760]
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Tissue distribution of vista3038
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Transcription factor that possibly regulate vista3038[chr1:116191587-116191760]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 116191575 116191863 SPI1 UCSC Txn Factor no Conserved 107823733
chr1 116191649 116191872 BATF UCSC Txn Factor no Conserved 107823751
chr1 116191599 116191609 SP1 JASPAR yes 31750084
chr1 116191599 116191609 SP1 JASPAR yes 118355731
chr1 116191605 116191615 SP1 JASPAR yes 31750085
chr1 116191605 116191615 SP1 JASPAR yes 118355732
chr1 116191611 116191625 PLAG1 JASPAR yes 31750086
chr1 116191611 116191625 PLAG1 JASPAR yes 118355733
chr1 116191671 116191685 BATF3 JASPAR yes 31750087
chr1 116191671 116191685 BATF3 JASPAR yes 118355734
chr1 116191674 116191679 ATF1 TRANSFAC yes 31750088
chr1 116191674 116191679 ATF1 TRANSFAC yes 118355735
chr1 116191674 116191682 CREB1 JASPAR yes 31750089
chr1 116191674 116191682 CREB1 JASPAR yes 118355736
chr1 116191695 116191704 ZEB1 JASPAR yes 31750090
chr1 116191695 116191704 ZEB1 JASPAR yes 118355737
chr1 116191695 116191706 TBX2 JASPAR yes 31750091
chr1 116191695 116191706 TBX2 JASPAR yes 118355738
chr1 116191695 116191708 EOMES JASPAR yes 31750092
chr1 116191695 116191708 EOMES JASPAR yes 118355739
chr1 116191696 116191706 TBR1 JASPAR yes 31750093
chr1 116191696 116191706 TBR1 JASPAR yes 118355740
chr1 116191698 116191709 FOXA1 JASPAR yes 31750094
chr1 116191698 116191709 FOXA1 JASPAR yes 118355741
chr1 116191700 116191711 FOXP2 JASPAR yes 31750095
chr1 116191700 116191711 FOXP2 JASPAR yes 118355742
chr1 116191713 116191724 TFAP2C JASPAR yes 31750096
chr1 116191713 116191724 TFAP2C JASPAR yes 118355743
chr1 116191714 116191723 TFAP2A JASPAR yes 31750097
chr1 116191714 116191723 TFAP2A JASPAR yes 118355744
chr1 116191719 116191723 LFA1 TRANSFAC yes 31750098
chr1 116191719 116191723 LFA1 TRANSFAC yes 118355745
chr1 116191722 116191735 ELF1 JASPAR yes 31750099
chr1 116191722 116191735 ELF1 JASPAR yes 118355746
chr1 116191723 116191744 IRF1 JASPAR yes 31750100
chr1 116191723 116191744 IRF1 JASPAR yes 118355747
chr1 116191725 116191735 GABPA JASPAR yes 31750101
chr1 116191725 116191735 GABPA JASPAR yes 118355748
chr1 116191725 116191736 FLI1 JASPAR yes 31750102
chr1 116191725 116191736 FLI1 JASPAR yes 118355749
chr1 116191726 116191731 ETS2 TRANSFAC yes 31750103
chr1 116191726 116191731 ETS2 TRANSFAC yes 118355750
chr1 116191726 116191734 FEV JASPAR yes 31750104
chr1 116191726 116191734 FEV JASPAR yes 118355751
chr1 116191727 116191734 SPI1 JASPAR yes 31750105
chr1 116191727 116191734 SPI1 JASPAR yes 118355752
chr1 116191727 116191741 STAT1 JASPAR yes 31750106
chr1 116191727 116191741 STAT1 JASPAR yes 118355753
chr1 116191727 116191742 PRDM1 JASPAR yes 31750107
chr1 116191727 116191742 STAT2 JASPAR yes 31750108
chr1 116191727 116191742 PRDM1 JASPAR yes 118355754
chr1 116191727 116191742 STAT2 JASPAR yes 118355755
chr1 116191756 116191761 MYB TRANSFAC yes 31750109
chr1 116191756 116191761 MYB TRANSFAC yes 118355756
SNP sites on vista3038[chr1:116191587-116191760]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 116191633 rs570547477 A C
SPI1
582095
chr1 116191678 rs148791464 C G,T
ATF1 BATF BATF3 CREB1 SPI1
582096
chr1 116191758 rs114722665 T C
BATF MYB SPI1
582097
Genes possibly regulated by vista3038[chr1:116191587-116191760]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 116184574 116240845 + VANGL1 ENSG00000173218.10 116184574 0.8 0.99 1054 92987
Expression level of Genes
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miRNAs possibly regulated by vista3038[chr1:116191587-116191760]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results