EnhancerDB
  1. Home
  2. Enhancers
  3. vista3039[chr1:116192035-116192337]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3039[chr1:116192035-116192337]
Back to top
Tissue distribution of vista3039
Back to top
Transcription factor that possibly regulate vista3039[chr1:116192035-116192337]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 116192019 116192038 PAX5 JASPAR yes 31750164
chr1 116192019 116192038 PAX5 JASPAR yes 118355757
chr1 116192050 116192054 NFE TRANSFAC yes 31750165
chr1 116192050 116192054 NFE TRANSFAC yes 118355758
chr1 116192050 116192063 SMAD2 JASPAR yes 31750166
chr1 116192050 116192063 SMAD2 JASPAR yes 118355759
chr1 116192061 116192070 ZEB1 JASPAR yes 31750167
chr1 116192061 116192070 ZEB1 JASPAR yes 118355760
chr1 116192077 116192085 EHF JASPAR yes 31750168
chr1 116192077 116192085 EHF JASPAR yes 118355761
chr1 116192111 116192122 STAT3 JASPAR yes 31750169
chr1 116192111 116192122 STAT3 JASPAR yes 118355762
chr1 116192119 116192123 YY1 TRANSFAC yes 31750170
chr1 116192119 116192123 YY1 TRANSFAC yes 118355763
chr1 116192125 116192135 GSX1 JASPAR yes 31750171
chr1 116192125 116192135 GSX2 JASPAR yes 31750172
chr1 116192125 116192135 GSX1 JASPAR yes 118355764
chr1 116192125 116192135 GSX2 JASPAR yes 118355765
chr1 116192125 116192136 HOXC13 JASPAR yes 31750173
chr1 116192125 116192136 HOXC13 JASPAR yes 118355766
chr1 116192126 116192134 NKX6-1 JASPAR yes 31750174
chr1 116192126 116192134 NKX6-2 JASPAR yes 31750175
chr1 116192126 116192134 NKX6-1 JASPAR yes 118355767
chr1 116192126 116192134 NKX6-2 JASPAR yes 118355768
chr1 116192126 116192136 HOXC10 JASPAR yes 31750176
chr1 116192126 116192136 HOXD13 JASPAR yes 31750177
chr1 116192126 116192136 HOXC10 JASPAR yes 118355769
chr1 116192126 116192136 HOXD13 JASPAR yes 118355770
chr1 116192128 116192132 YY1 TRANSFAC yes 31750178
chr1 116192128 116192132 YY1 TRANSFAC yes 118355771
chr1 116192140 116192147 SPIB JASPAR yes 31750179
chr1 116192140 116192147 SPIB JASPAR yes 118355772
chr1 116192151 116192155 YY1 TRANSFAC yes 31750180
chr1 116192151 116192155 YY1 TRANSFAC yes 118355773
chr1 116192159 116192169 RUNX3 JASPAR yes 31750181
chr1 116192159 116192169 RUNX3 JASPAR yes 118355774
chr1 116192174 116192187 SMAD2 JASPAR yes 31750182
chr1 116192174 116192187 SMAD2 JASPAR yes 118355775
chr1 116192184 116192202 IRF2 JASPAR yes 31750183
chr1 116192184 116192202 IRF2 JASPAR yes 118355776
chr1 116192187 116192202 STAT2 JASPAR yes 31750184
chr1 116192187 116192202 STAT2 JASPAR yes 118355777
chr1 116192188 116192202 STAT1 JASPAR yes 31750185
chr1 116192188 116192202 STAT1 JASPAR yes 118355778
chr1 116192204 116192217 ZBTB18 JASPAR yes 31750186
chr1 116192204 116192217 ZBTB18 JASPAR yes 118355779
chr1 116192247 116192251 YY1 TRANSFAC yes 31750187
chr1 116192247 116192251 YY1 TRANSFAC yes 118355780
chr1 116192252 116192268 RFX2 JASPAR yes 31750188
chr1 116192252 116192268 RFX3 JASPAR yes 31750189
chr1 116192252 116192268 RFX4 JASPAR yes 31750190
chr1 116192252 116192268 RFX5 JASPAR yes 31750191
chr1 116192252 116192268 RFX2 JASPAR yes 118355781
chr1 116192252 116192268 RFX3 JASPAR yes 118355782
chr1 116192252 116192268 RFX4 JASPAR yes 118355783
chr1 116192252 116192268 RFX5 JASPAR yes 118355784
chr1 116192253 116192272 RFX2 JASPAR yes 31750192
chr1 116192253 116192272 RFX2 JASPAR yes 118355785
chr1 116192268 116192283 FOXA1 JASPAR yes 31750193
chr1 116192268 116192283 FOXA1 JASPAR yes 118355786
chr1 116192270 116192283 POU2F2 JASPAR yes 31750194
chr1 116192270 116192283 POU2F2 JASPAR yes 118355787
chr1 116192270 116192284 POU1F1 JASPAR yes 31750195
chr1 116192270 116192284 POU1F1 JASPAR yes 118355788
chr1 116192271 116192282 FOXB1 JASPAR yes 31750196
chr1 116192271 116192282 FOXC1 JASPAR yes 31750197
chr1 116192271 116192282 FOXB1 JASPAR yes 118355789
chr1 116192271 116192282 FOXC1 JASPAR yes 118355790
chr1 116192271 116192283 POU3F1 JASPAR yes 31750198
chr1 116192271 116192283 POU3F2 JASPAR yes 31750199
chr1 116192271 116192283 POU3F1 JASPAR yes 118355791
chr1 116192271 116192283 POU3F2 JASPAR yes 118355792
chr1 116192271 116192284 POU3F3 JASPAR yes 31750200
chr1 116192271 116192284 POU3F3 JASPAR yes 118355793
chr1 116192272 116192276 YY1 TRANSFAC yes 31750201
chr1 116192272 116192276 YY1 TRANSFAC yes 118355794
chr1 116192272 116192283 FOXA1 JASPAR yes 31750202
chr1 116192272 116192283 FOXA1 JASPAR yes 118355795
chr1 116192272 116192284 POU2F1 JASPAR yes 31750203
chr1 116192272 116192284 POU2F1 JASPAR yes 118355796
chr1 116192273 116192280 POU2F1 TRANSFAC yes 31750204
chr1 116192273 116192280 POU2F2C TRANSFAC yes 31750205
chr1 116192273 116192280 POU2F2 TRANSFAC yes 31750206
chr1 116192273 116192280 POU2F1 TRANSFAC yes 118355797
chr1 116192273 116192280 POU2F2C TRANSFAC yes 118355798
chr1 116192273 116192280 POU2F2 TRANSFAC yes 118355799
chr1 116192273 116192281 POU2F1 TRANSFAC yes 31750207
chr1 116192273 116192281 POU2F1 TRANSFAC yes 118355800
chr1 116192273 116192282 POU3F4 JASPAR yes 31750208
chr1 116192273 116192282 POU5F1B JASPAR yes 31750209
chr1 116192273 116192282 POU3F4 JASPAR yes 118355801
chr1 116192273 116192282 POU5F1B JASPAR yes 118355802
chr1 116192278 116192282 YY1 TRANSFAC yes 31750210
chr1 116192278 116192282 YY1 TRANSFAC yes 118355803
chr1 116192291 116192305 TCF7L2 JASPAR yes 31750211
chr1 116192291 116192305 TCF7L2 JASPAR yes 118355804
chr1 116192295 116192301 TCF1 TRANSFAC yes 31750212
chr1 116192295 116192301 TCF1 TRANSFAC yes 118355805
chr1 116192304 116192314 HMBOX1 JASPAR yes 31750213
chr1 116192304 116192314 HMBOX1 JASPAR yes 118355806
chr1 116192306 116192321 MEF2A JASPAR yes 31750214
chr1 116192306 116192321 MEF2A JASPAR yes 118355807
chr1 116192321 116192326 SP1 TRANSFAC yes 31750215
chr1 116192321 116192326 SP1 TRANSFAC yes 118355808
SNP sites on vista3039[chr1:116192035-116192337]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 116192046 rs552608511 C G,T no 582102
chr1 116192048 rs2997744 G A no 582103
chr1 116192059 rs12034462 C A
SMAD2
582104
chr1 116192165 rs61800293 G A,T
RUNX3
582105
Genes possibly regulated by vista3039[chr1:116192035-116192337]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 116184574 116240845 + VANGL1 ENSG00000173218.10 116184574 0.8 0.99 1054 92539
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3039[chr1:116192035-116192337]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results