EnhancerDB
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  3. vista3041[chr1:116221756-116221883]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3041[chr1:116221756-116221883]
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Tissue distribution of vista3041
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Transcription factor that possibly regulate vista3041[chr1:116221756-116221883]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 116221743 116221758 TP53 JASPAR yes 31752964
chr1 116221743 116221758 TP53 JASPAR yes 118355869
chr1 116221812 116221825 TFAP2A JASPAR yes 31752965
chr1 116221812 116221825 TFAP2B JASPAR yes 31752966
chr1 116221812 116221825 TFAP2C JASPAR yes 31752967
chr1 116221812 116221825 TFAP2A JASPAR yes 118355870
chr1 116221812 116221825 TFAP2B JASPAR yes 118355871
chr1 116221812 116221825 TFAP2C JASPAR yes 118355872
chr1 116221830 116221841 TFAP2B JASPAR yes 31752968
chr1 116221830 116221841 TFAP2B JASPAR yes 118355873
chr1 116221840 116221854 JUN JASPAR yes 31752969
chr1 116221840 116221854 JUN JASPAR yes 118355874
chr1 116221842 116221853 BATF JASPAR yes 31752970
chr1 116221842 116221853 BATF JASPAR yes 118355875
chr1 116221844 116221855 FOS JASPAR yes 31752971
chr1 116221844 116221855 FOSL1 JASPAR yes 31752972
chr1 116221844 116221855 JUND JASPAR yes 31752973
chr1 116221844 116221855 FOS JASPAR yes 118355876
chr1 116221844 116221855 FOSL1 JASPAR yes 118355877
chr1 116221844 116221855 JUND JASPAR yes 118355878
chr1 116221845 116221854 JDP2 JASPAR yes 31752974
chr1 116221845 116221854 JDP2 JASPAR yes 118355879
chr1 116221845 116221856 FOSL2 JASPAR yes 31752975
chr1 116221845 116221856 JUNB JASPAR yes 31752976
chr1 116221845 116221856 FOSL2 JASPAR yes 118355880
chr1 116221845 116221856 JUNB JASPAR yes 118355881
chr1 116221845 116221859 JUN JASPAR yes 31752977
chr1 116221845 116221859 JUN JASPAR yes 118355882
chr1 116221846 116221857 BATF JASPAR yes 31752978
chr1 116221846 116221857 BATF JASPAR yes 118355883
chr1 116221851 116221864 SCRT2 JASPAR yes 31752979
chr1 116221851 116221864 SCRT2 JASPAR yes 118355884
chr1 116221872 116221876 LFA1 TRANSFAC yes 31752980
chr1 116221872 116221876 LFA1 TRANSFAC yes 118355885
SNP sites on vista3041[chr1:116221756-116221883]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 116221764 rs541291515 G A no 582376
chr1 116221800 rs530209808 G A no 582377
chr1 116221873 rs116647512 G C
LFA1
582378
chr1 116221881 rs549926963 C T no 582379
Genes possibly regulated by vista3041[chr1:116221756-116221883]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 116184574 116240845 + VANGL1 ENSG00000173218.10 116184574 0.8 0.99 1054 62818
chr1 116242628 116311402 - CASQ2 ENSG00000118729.10 116311402 0.98 0.99 1055 10481
Expression level of Genes
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miRNAs possibly regulated by vista3041[chr1:116221756-116221883]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results