EnhancerDB
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  3. vista3043[chr1:116291091-116291334]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3043[chr1:116291091-116291334]
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Tissue distribution of vista3043
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Transcription factor that possibly regulate vista3043[chr1:116291091-116291334]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 116291093 116291108 NR2C2 JASPAR yes 31755532
chr1 116291093 116291108 NR2C2 JASPAR yes 118355916
chr1 116291096 116291101 SP1 TRANSFAC yes 31755533
chr1 116291096 116291101 SP1 TRANSFAC yes 118355917
chr1 116291109 116291121 PKNOX1 JASPAR yes 31755534
chr1 116291109 116291121 PKNOX1 JASPAR yes 118355918
chr1 116291116 116291119 MYB TRANSFAC yes 31755535
chr1 116291116 116291119 MYB TRANSFAC yes 118355919
chr1 116291116 116291128 FOXI1 JASPAR yes 31755536
chr1 116291116 116291128 FOXI1 JASPAR yes 118355920
chr1 116291127 116291147 RREB1 JASPAR yes 31755537
chr1 116291127 116291147 RREB1 JASPAR yes 118355921
chr1 116291127 116291148 ZNF263 JASPAR yes 31755538
chr1 116291127 116291148 ZNF263 JASPAR yes 118355922
chr1 116291130 116291150 RREB1 JASPAR yes 31755539
chr1 116291130 116291150 RREB1 JASPAR yes 118355923
chr1 116291131 116291151 RREB1 JASPAR yes 31755540
chr1 116291131 116291151 RREB1 JASPAR yes 118355924
chr1 116291132 116291142 SP1 JASPAR yes 31755541
chr1 116291132 116291142 SP1 JASPAR yes 118355925
chr1 116291132 116291152 RREB1 JASPAR yes 31755542
chr1 116291132 116291152 RREB1 JASPAR yes 118355926
chr1 116291132 116291153 ZNF263 JASPAR yes 31755543
chr1 116291132 116291153 ZNF263 JASPAR yes 118355927
chr1 116291134 116291144 ZNF740 JASPAR yes 31755544
chr1 116291134 116291144 ZNF740 JASPAR yes 118355928
chr1 116291150 116291171 IRF1 JASPAR yes 31755545
chr1 116291150 116291171 IRF1 JASPAR yes 118355929
chr1 116291152 116291167 PRDM1 JASPAR yes 31755546
chr1 116291152 116291167 PRDM1 JASPAR yes 118355930
chr1 116291158 116291164 MYC TRANSFAC yes 31755547
chr1 116291158 116291164 MYC TRANSFAC yes 118355931
chr1 116291163 116291167 YY1 TRANSFAC yes 31755548
chr1 116291163 116291167 YY1 TRANSFAC yes 118355932
chr1 116291163 116291184 IRF1 JASPAR yes 31755549
chr1 116291163 116291184 IRF1 JASPAR yes 118355933
chr1 116291167 116291179 IRF1 JASPAR yes 31755550
chr1 116291167 116291179 IRF1 JASPAR yes 118355934
chr1 116291172 116291176 YY1 TRANSFAC yes 31755551
chr1 116291172 116291176 YY1 TRANSFAC yes 118355935
chr1 116291181 116291191 HMBOX1 JASPAR yes 31755552
chr1 116291181 116291191 HMBOX1 JASPAR yes 118355936
chr1 116291183 116291186 MYB TRANSFAC yes 31755553
chr1 116291183 116291186 MYB TRANSFAC yes 118355937
chr1 116291192 116291201 NKX3-2 JASPAR yes 31755554
chr1 116291192 116291201 NKX3-2 JASPAR yes 118355938
chr1 116291192 116291202 NKX2-3 JASPAR yes 31755555
chr1 116291192 116291202 NKX2-3 JASPAR yes 118355939
chr1 116291193 116291201 ISL2 JASPAR yes 31755556
chr1 116291193 116291201 ISL2 JASPAR yes 118355940
chr1 116291198 116291212 TCF7L2 JASPAR yes 31755557
chr1 116291198 116291212 TCF7L2 JASPAR yes 118355941
chr1 116291198 116291213 LEF1 JASPAR yes 31755558
chr1 116291198 116291213 LEF1 JASPAR yes 118355942
chr1 116291202 116291208 TCF4 TRANSFAC yes 31755559
chr1 116291202 116291208 TCF4 TRANSFAC yes 118355943
chr1 116291217 116291229 FOXC2 JASPAR yes 31755560
chr1 116291217 116291229 FOXC2 JASPAR yes 118355944
chr1 116291217 116291231 FOXF2 JASPAR yes 31755561
chr1 116291217 116291231 FOXF2 JASPAR yes 118355945
chr1 116291218 116291226 FOXG1 JASPAR yes 31755562
chr1 116291218 116291226 FOXG1 JASPAR yes 118355946
chr1 116291223 116291237 JUN JASPAR yes 31755563
chr1 116291223 116291237 JUN JASPAR yes 118355947
chr1 116291225 116291236 BATF JASPAR yes 31755564
chr1 116291225 116291236 BATF JASPAR yes 118355948
chr1 116291226 116291237 FOSL2 JASPAR yes 31755565
chr1 116291226 116291237 JUNB JASPAR yes 31755566
chr1 116291226 116291237 FOSL2 JASPAR yes 118355949
chr1 116291226 116291237 JUNB JASPAR yes 118355950
chr1 116291227 116291238 FOS JASPAR yes 31755567
chr1 116291227 116291238 FOSL1 JASPAR yes 31755568
chr1 116291227 116291238 JUND JASPAR yes 31755569
chr1 116291227 116291238 NFE2 JASPAR yes 31755570
chr1 116291227 116291238 FOS JASPAR yes 118355951
chr1 116291227 116291238 FOSL1 JASPAR yes 118355952
chr1 116291227 116291238 JUND JASPAR yes 118355953
chr1 116291227 116291238 NFE2 JASPAR yes 118355954
chr1 116291228 116291237 JDP2 JASPAR yes 31755571
chr1 116291228 116291237 JDP2 JASPAR yes 118355955
chr1 116291228 116291239 FOSL2 JASPAR yes 31755572
chr1 116291228 116291239 JUNB JASPAR yes 31755573
chr1 116291228 116291239 FOSL2 JASPAR yes 118355956
chr1 116291228 116291239 JUNB JASPAR yes 118355957
chr1 116291228 116291242 JUN JASPAR yes 31755574
chr1 116291228 116291242 JUN JASPAR yes 118355958
chr1 116291229 116291240 BATF JASPAR yes 31755575
chr1 116291229 116291240 BATF JASPAR yes 118355959
chr1 116291303 116291307 YY1 TRANSFAC yes 31755576
chr1 116291303 116291307 YY1 TRANSFAC yes 118355960
chr1 116291309 116291322 SMAD2 JASPAR yes 31755577
chr1 116291309 116291322 SMAD2 JASPAR yes 118355961
chr1 116291318 116291324 SOX10 JASPAR yes 31755578
chr1 116291318 116291324 SOX10 JASPAR yes 118355962
chr1 116291320 116291332 YY1 JASPAR yes 31755579
chr1 116291320 116291332 YY1 JASPAR yes 118355963
chr1 116291325 116291329 YY1 TRANSFAC yes 31755580
chr1 116291325 116291329 YY1 TRANSFAC yes 118355964
chr1 116291329 116291339 HOXC10 JASPAR yes 31755581
chr1 116291329 116291339 HOXD11 JASPAR yes 31755582
chr1 116291329 116291339 HOXC10 JASPAR yes 118355965
chr1 116291329 116291339 HOXD11 JASPAR yes 118355966
chr1 116291329 116291340 HOXA10 JASPAR yes 31755583
chr1 116291329 116291340 HOXC11 JASPAR yes 31755584
chr1 116291329 116291340 HOXC12 JASPAR yes 31755585
chr1 116291329 116291340 HOXD12 JASPAR yes 31755586
chr1 116291329 116291340 HOXA10 JASPAR yes 118355967
chr1 116291329 116291340 HOXC11 JASPAR yes 118355968
chr1 116291329 116291340 HOXC12 JASPAR yes 118355969
chr1 116291329 116291340 HOXD12 JASPAR yes 118355970
chr1 116291330 116291340 GSX2 JASPAR yes 31755587
chr1 116291330 116291340 HOXB3 JASPAR yes 31755588
chr1 116291330 116291340 MEOX2 JASPAR yes 31755589
chr1 116291330 116291340 MNX1 JASPAR yes 31755590
chr1 116291330 116291340 GSX2 JASPAR yes 118355971
chr1 116291330 116291340 HOXB3 JASPAR yes 118355972
chr1 116291330 116291340 MEOX2 JASPAR yes 118355973
chr1 116291330 116291340 MNX1 JASPAR yes 118355974
chr1 116291331 116291339 NKX6-1 JASPAR yes 31755591
chr1 116291331 116291339 NKX6-1 JASPAR yes 118355975
SNP sites on vista3043[chr1:116291091-116291334]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 116291094 rs61798518 A G
NR2C2
582740
chr1 116291129 rs535315132 C CGGGT
RREB1 ZNF263
582741
chr1 116291140 rs528072074 C T
RREB1 SP1 ZNF263 ZNF740
582742
chr1 116291160 rs139593596 C CTCTTATT
IRF1 MYC PRDM1
582743
chr1 116291160 rs200136719 C CTCTTATT
IRF1 MYC PRDM1
582744
chr1 116291201 rs10801971 A G
ISL2 LEF1 NKX2-3 NKX3-2 TCF7L2
582745
Genes possibly regulated by vista3043[chr1:116291091-116291334]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 116242628 116311402 - CASQ2 ENSG00000118729.10 116311402 0.98 0.99 1055 79932
chr1 116378998 116386538 - NHLH2 ENSG00000177551.5 116386538 0.97 0.99 1056 4796
Expression level of Genes
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miRNAs possibly regulated by vista3043[chr1:116291091-116291334]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results