EnhancerDB
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  3. vista3047[chr1:116588429-116588746]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3047[chr1:116588429-116588746]
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Tissue distribution of vista3047
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Transcription factor that possibly regulate vista3047[chr1:116588429-116588746]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 116588468 116588479 RUNX1 JASPAR yes 118356183
chr1 116588468 116588486 SRF JASPAR yes 118356184
chr1 116588470 116588486 SRF JASPAR yes 118356185
chr1 116588481 116588485 ESR1 TRANSFAC yes 118356186
chr1 116588483 116588497 ONECUT1 JASPAR yes 118356187
chr1 116588483 116588497 ONECUT2 JASPAR yes 118356188
chr1 116588483 116588497 ONECUT3 JASPAR yes 118356189
chr1 116588484 116588494 PAX3 JASPAR yes 118356190
chr1 116588484 116588494 PAX7 JASPAR yes 118356191
chr1 116588499 116588506 MEIS1 JASPAR yes 118356192
chr1 116588499 116588507 MEIS2 JASPAR yes 118356193
chr1 116588510 116588528 ESR1 JASPAR yes 118356194
chr1 116588525 116588540 MEF2A JASPAR yes 118356195
chr1 116588526 116588538 MEF2A JASPAR yes 118356196
chr1 116588527 116588537 MEF2A JASPAR yes 118356197
chr1 116588534 116588538 YY1 TRANSFAC yes 118356198
chr1 116588542 116588553 BATF JASPAR yes 118356199
chr1 116588548 116588561 POU2F2 JASPAR yes 118356200
chr1 116588549 116588561 POU3F1 JASPAR yes 118356201
chr1 116588549 116588561 POU3F2 JASPAR yes 118356202
chr1 116588549 116588562 POU3F3 JASPAR yes 118356203
chr1 116588551 116588560 POU3F4 JASPAR yes 118356204
chr1 116588552 116588560 FOXL1 JASPAR yes 118356205
chr1 116588563 116588579 SOX8 JASPAR yes 118356206
chr1 116588575 116588579 ESR1 TRANSFAC yes 118356207
chr1 116588576 116588586 HESX1 JASPAR yes 118356208
chr1 116588576 116588586 RAX JASPAR yes 118356209
chr1 116588577 116588585 ISX JASPAR yes 118356210
chr1 116588577 116588585 LHX9 JASPAR yes 118356211
chr1 116588577 116588585 LMX1B JASPAR yes 118356212
chr1 116588577 116588585 PRRX1 JASPAR yes 118356213
chr1 116588577 116588585 RAX2 JASPAR yes 118356214
chr1 116588577 116588585 SHOX JASPAR yes 118356215
chr1 116588577 116588585 UNCX JASPAR yes 118356216
chr1 116588577 116588593 POU4F3 JASPAR yes 118356217
chr1 116588578 116588588 PAX3 JASPAR yes 118356218
chr1 116588579 116588593 POU4F1 JASPAR yes 118356219
chr1 116588579 116588594 HNF1A JASPAR yes 118356220
chr1 116588580 116588593 HNF1B JASPAR yes 118356221
chr1 116588580 116588594 POU4F1 JASPAR yes 118356222
chr1 116588580 116588596 POU4F2 JASPAR yes 118356223
chr1 116588580 116588596 POU4F3 JASPAR yes 118356224
chr1 116588599 116588611 POU2F1 JASPAR yes 118356225
chr1 116588600 116588612 POU3F1 JASPAR yes 118356226
chr1 116588600 116588612 POU3F2 JASPAR yes 118356227
chr1 116588606 116588617 PROP1 JASPAR yes 118356228
chr1 116588617 116588625 FOXO3 JASPAR yes 118356229
chr1 116588625 116588628 MYB TRANSFAC yes 118356230
chr1 116588634 116588640 TBP TRANSFAC yes 118356231
chr1 116588652 116588655 MYB TRANSFAC yes 118356232
chr1 116588677 116588681 TEAD2 TRANSFAC yes 118356233
chr1 116588679 116588682 MYB TRANSFAC yes 118356234
chr1 116588693 116588704 PHOX2A JASPAR yes 118356235
chr1 116588693 116588704 PROP1 JASPAR yes 118356236
chr1 116588699 116588703 YY1 TRANSFAC yes 118356237
chr1 116588708 116588719 CDX2 JASPAR yes 118356238
chr1 116588709 116588720 HOXA10 JASPAR yes 118356239
chr1 116588710 116588719 CDX1 JASPAR yes 118356240
chr1 116588733 116588736 MYB TRANSFAC yes 118356241
SNP sites on vista3047[chr1:116588429-116588746]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 116588491 rs149958210 AT A
ONECUT1 ONECUT2 ONECUT3 PAX3 PAX7
585099
chr1 116588554 rs575844156 A G
FOXL1 POU2F2 POU3F1 POU3F2 POU3F3 POU3F4
585100
chr1 116588642 rs75412453 C T no 585101
Genes possibly regulated by vista3047[chr1:116588429-116588746]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 116519119 116612675 + SLC22A15 ENSG00000163393.8 116519119 0.83 1.0 1057 30690
chr1 116654376 116677861 + MAB21L3 ENSG00000173212.4 116654376 0.89 0.98 1058 34370
Expression level of Genes
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miRNAs possibly regulated by vista3047[chr1:116588429-116588746]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results