EnhancerDB
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  3. vista3048[chr1:116694646-116694883]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3048[chr1:116694646-116694883]
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Tissue distribution of vista3048
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Transcription factor that possibly regulate vista3048[chr1:116694646-116694883]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 116694519 116694999 ZNF263 UCSC Txn Factor no Conserved 107823876
chr1 116694604 116695001 CTCF UCSC Txn Factor no Conserved 107823879
chr1 116694652 116694960 SMC3 UCSC Txn Factor no Conserved 107823887
chr1 116694690 116694973 RAD21 UCSC Txn Factor no Conserved 107823900
chr1 116694715 116695034 UBTF UCSC Txn Factor no Conserved 107823912
chr1 116694776 116695034 RUNX3 UCSC Txn Factor no Conserved 107823937
chr1 116694803 116695065 EGR1 UCSC Txn Factor no Conserved 107823941
chr1 116694648 116694652 NFE TRANSFAC yes 31776669
chr1 116694648 116694652 NFE TRANSFAC yes 118356242
chr1 116694651 116694666 RFX5 JASPAR yes 31776670
chr1 116694651 116694666 RFX5 JASPAR yes 118356243
chr1 116694678 116694699 ZNF263 JASPAR yes 31776671
chr1 116694678 116694699 ZNF263 JASPAR yes 118356244
chr1 116694685 116694706 ZNF263 JASPAR yes 31776672
chr1 116694685 116694706 ZNF263 JASPAR yes 118356245
chr1 116694688 116694709 ZNF263 JASPAR yes 31776673
chr1 116694688 116694709 ZNF263 JASPAR yes 118356246
chr1 116694690 116694705 PRDM1 JASPAR yes 31776674
chr1 116694690 116694705 PRDM1 JASPAR yes 118356247
chr1 116694704 116694716 HINFP JASPAR yes 31776675
chr1 116694704 116694716 HINFP JASPAR yes 118356248
chr1 116694710 116694715 SP1 TRANSFAC yes 31776676
chr1 116694710 116694715 SP1 TRANSFAC yes 118356249
chr1 116694738 116694748 MZF1 JASPAR yes 31776677
chr1 116694738 116694748 MZF1 JASPAR yes 118356250
chr1 116694742 116694747 ETS2 TRANSFAC yes 31776678
chr1 116694742 116694747 ETS2 TRANSFAC yes 118356251
chr1 116694797 116694803 ETS1 JASPAR yes 31776679
chr1 116694797 116694803 SPI1 JASPAR yes 31776680
chr1 116694797 116694803 ETS1 JASPAR yes 118356252
chr1 116694797 116694803 SPI1 JASPAR yes 118356253
chr1 116694799 116694818 CTCF JASPAR yes 31776681
chr1 116694799 116694818 CTCF JASPAR yes 118356254
chr1 116694800 116694815 ZIC3 JASPAR yes 31776682
chr1 116694800 116694815 ZIC4 JASPAR yes 31776683
chr1 116694800 116694815 ZIC3 JASPAR yes 118356255
chr1 116694800 116694815 ZIC4 JASPAR yes 118356256
chr1 116694801 116694815 ZIC1 JASPAR yes 31776684
chr1 116694801 116694815 ZIC1 JASPAR yes 118356257
chr1 116694813 116694824 TFAP2A JASPAR yes 31776685
chr1 116694813 116694824 TFAP2B JASPAR yes 31776686
chr1 116694813 116694824 TFAP2C JASPAR yes 31776687
chr1 116694813 116694824 TFAP2A JASPAR yes 118356258
chr1 116694813 116694824 TFAP2B JASPAR yes 118356259
chr1 116694813 116694824 TFAP2C JASPAR yes 118356260
chr1 116694814 116694823 TFAP2A JASPAR yes 31776688
chr1 116694814 116694823 TFAP2A JASPAR yes 118356261
chr1 116694850 116694855 TFAP2A TRANSFAC yes 31776689
chr1 116694850 116694855 TFAP2A TRANSFAC yes 118356262
chr1 116694850 116694856 MZF1 JASPAR yes 31776690
chr1 116694850 116694856 MZF1 JASPAR yes 118356263
chr1 116694852 116694862 NFKB1 JASPAR yes 31776691
chr1 116694852 116694862 RELA JASPAR yes 31776692
chr1 116694852 116694862 REL JASPAR yes 31776693
chr1 116694852 116694862 NFKB1 JASPAR yes 118356264
chr1 116694852 116694862 RELA JASPAR yes 118356265
chr1 116694852 116694862 REL JASPAR yes 118356266
chr1 116694852 116694863 NFKB1 JASPAR yes 31776694
chr1 116694852 116694863 NFKB1 JASPAR yes 118356267
chr1 116694859 116694870 E2F4 JASPAR yes 31776695
chr1 116694859 116694870 E2F4 JASPAR yes 118356268
SNP sites on vista3048[chr1:116694646-116694883]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 116694658 rs543199703 A G
CTCF RFX5 SMC3 ZNF263
585752
chr1 116694743 rs532636330 G A
CTCF ETS2 MZF1 RAD21 SMC3 UBTF ZNF263
585753
chr1 116694762 rs547527911 A G
CTCF RAD21 SMC3 UBTF ZNF263
585754
chr1 116694771 rs36066728 G C,T
CTCF RAD21 SMC3 UBTF ZNF263
585755
chr1 116694780 rs78733378 G T
CTCF RAD21 RUNX3 SMC3 UBTF ZNF263
585756
chr1 116694855 rs548919470 G A
CTCF EGR1 MZF1 NFKB1 RAD21 REL RELA RUNX3 SMC3 TFAP2A UBTF ZNF263
585757
Genes possibly regulated by vista3048[chr1:116694646-116694883]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 116654376 116677861 + MAB21L3 ENSG00000173212.4 116654376 0.89 0.98 1058 59730
Expression level of Genes
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miRNAs possibly regulated by vista3048[chr1:116694646-116694883]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results