EnhancerDB
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  3. vista3049[chr1:116727924-116728081]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3049[chr1:116727924-116728081]
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Tissue distribution of vista3049
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Transcription factor that possibly regulate vista3049[chr1:116727924-116728081]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 116727949 116727964 RUNX2 JASPAR yes 31779963
chr1 116727949 116727964 RUNX2 JASPAR yes 118356269
chr1 116727960 116727964 YY1 TRANSFAC yes 31779964
chr1 116727960 116727964 YY1 TRANSFAC yes 118356270
chr1 116727974 116727987 JUN JASPAR yes 31779965
chr1 116727974 116727987 JUN JASPAR yes 118356271
chr1 116727975 116727988 ATF4 JASPAR yes 31779966
chr1 116727975 116727988 ATF4 JASPAR yes 118356272
chr1 116727976 116727988 DBP JASPAR yes 31779967
chr1 116727976 116727988 DBP JASPAR yes 118356273
chr1 116727978 116727989 NFIL3 JASPAR yes 31779968
chr1 116727978 116727989 NFIL3 JASPAR yes 118356274
chr1 116727983 116727986 MYB TRANSFAC yes 31779969
chr1 116727983 116727986 MYB TRANSFAC yes 118356275
chr1 116727986 116728006 TBX19 JASPAR yes 31779970
chr1 116727986 116728006 TBX19 JASPAR yes 118356276
chr1 116727988 116728004 T JASPAR yes 31779971
chr1 116727988 116728004 T JASPAR yes 118356277
chr1 116728000 116728008 MEIS2 JASPAR yes 31779972
chr1 116728000 116728008 MEIS3 JASPAR yes 31779973
chr1 116728000 116728008 MEIS2 JASPAR yes 118356278
chr1 116728000 116728008 MEIS3 JASPAR yes 118356279
chr1 116728001 116728013 PKNOX2 JASPAR yes 31779974
chr1 116728001 116728013 TGIF1 JASPAR yes 31779975
chr1 116728001 116728013 TGIF2 JASPAR yes 31779976
chr1 116728001 116728013 PKNOX2 JASPAR yes 118356280
chr1 116728001 116728013 TGIF1 JASPAR yes 118356281
chr1 116728001 116728013 TGIF2 JASPAR yes 118356282
chr1 116728035 116728047 MEF2A JASPAR yes 31779977
chr1 116728035 116728047 MEF2A JASPAR yes 118356283
chr1 116728049 116728056 NKX3-1 JASPAR yes 31779978
chr1 116728049 116728056 NKX3-1 JASPAR yes 118356284
chr1 116728063 116728074 JUNB JASPAR yes 31779979
chr1 116728063 116728074 JUNB JASPAR yes 118356285
chr1 116728064 116728075 FOS JASPAR yes 31779980
chr1 116728064 116728075 FOS JASPAR yes 118356286
chr1 116728066 116728077 BATF JASPAR yes 31779981
chr1 116728066 116728077 BATF JASPAR yes 118356287
SNP sites on vista3049[chr1:116727924-116728081]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 116727934 rs554361318 C T no 586082
chr1 116727935 rs576037567 G A no 586083
chr1 116727955 rs72693734 C T
RUNX2
586084
chr1 116727982 rs10802166 T C
ATF4 DBP JUN NFIL3
586085
chr1 116728020 rs77138672 C T no 586086
chr1 116728059 rs114537601 G A no 586087
Genes possibly regulated by vista3049[chr1:116727924-116728081]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 116654376 116677861 + MAB21L3 ENSG00000173212.4 116654376 0.89 0.98 1058 26452
Expression level of Genes
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miRNAs possibly regulated by vista3049[chr1:116727924-116728081]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results