EnhancerDB
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  3. vista3050[chr1:116878887-116879201]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3050[chr1:116878887-116879201]
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Tissue distribution of vista3050
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Transcription factor that possibly regulate vista3050[chr1:116878887-116879201]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 116878876 116878887 HOXA10 JASPAR yes 31796722
chr1 116878876 116878887 HOXA10 JASPAR yes 118356288
chr1 116878891 116878895 YY1 TRANSFAC yes 31796725
chr1 116878891 116878895 YY1 TRANSFAC yes 118356289
chr1 116878898 116878902 NFE TRANSFAC yes 31796726
chr1 116878898 116878902 NFE TRANSFAC yes 118356290
chr1 116878905 116878910 H4TF1 TRANSFAC yes 31796727
chr1 116878905 116878910 H4TF1 TRANSFAC yes 118356291
chr1 116878908 116878918 MEF2A JASPAR yes 31796728
chr1 116878908 116878918 MEF2A JASPAR yes 118356292
chr1 116878920 116878925 GATA2 JASPAR yes 31796729
chr1 116878920 116878925 GATA2 JASPAR yes 118356293
chr1 116878934 116878947 NR2F1 JASPAR yes 31796730
chr1 116878934 116878947 NR2F1 JASPAR yes 118356294
chr1 116878938 116878948 RORA JASPAR yes 31796731
chr1 116878938 116878948 RORA JASPAR yes 118356295
chr1 116878949 116878960 NFKB1 JASPAR yes 31796732
chr1 116878949 116878960 NFKB1 JASPAR yes 118356296
chr1 116878952 116878967 STAT1 JASPAR yes 31796733
chr1 116878952 116878967 STAT1 JASPAR yes 118356297
chr1 116878953 116878960 NFATC2 JASPAR yes 31796734
chr1 116878953 116878960 NFATC2 JASPAR yes 118356298
chr1 116878954 116878965 STAT1 JASPAR yes 31796735
chr1 116878954 116878965 STAT3 JASPAR yes 31796736
chr1 116878954 116878965 STAT1 JASPAR yes 118356299
chr1 116878954 116878965 STAT3 JASPAR yes 118356300
chr1 116878955 116878966 CDX2 JASPAR yes 31796737
chr1 116878955 116878966 CDX2 JASPAR yes 118356301
chr1 116878957 116878961 H1TF2 TRANSFAC yes 31796738
chr1 116878957 116878961 NFE TRANSFAC yes 31796739
chr1 116878957 116878961 SRF TRANSFAC yes 31796740
chr1 116878957 116878961 H1TF2 TRANSFAC yes 118356302
chr1 116878957 116878961 NFE TRANSFAC yes 118356303
chr1 116878957 116878961 SRF TRANSFAC yes 118356304
chr1 116878957 116878966 CDX1 JASPAR yes 31796741
chr1 116878957 116878966 CDX1 JASPAR yes 118356305
chr1 116878957 116878967 HOXA13 JASPAR yes 31796742
chr1 116878957 116878967 HOXB13 JASPAR yes 31796743
chr1 116878957 116878967 HOXD13 JASPAR yes 31796744
chr1 116878957 116878967 HOXA13 JASPAR yes 118356306
chr1 116878957 116878967 HOXB13 JASPAR yes 118356307
chr1 116878957 116878967 HOXD13 JASPAR yes 118356308
chr1 116878962 116878975 HSF2 JASPAR yes 31796745
chr1 116878962 116878975 HSF2 JASPAR yes 118356309
chr1 116878992 116879001 ZEB1 JASPAR yes 31796746
chr1 116878992 116879001 ZEB1 JASPAR yes 118356310
chr1 116878995 116879004 NKX3-2 JASPAR yes 31796747
chr1 116878995 116879004 NKX3-2 JASPAR yes 118356311
chr1 116879019 116879030 NFE2L2 JASPAR yes 31796748
chr1 116879019 116879030 NFE2L2 JASPAR yes 118356312
chr1 116879022 116879035 ZBED1 JASPAR yes 31796749
chr1 116879022 116879035 ZBED1 JASPAR yes 118356313
chr1 116879023 116879027 NFE TRANSFAC yes 31796750
chr1 116879023 116879027 NFE TRANSFAC yes 118356314
chr1 116879023 116879036 ZBED1 JASPAR yes 31796751
chr1 116879023 116879036 ZBED1 JASPAR yes 118356315
chr1 116879025 116879039 PAX6 JASPAR yes 31796752
chr1 116879025 116879039 PAX6 JASPAR yes 118356316
chr1 116879028 116879042 ONECUT1 JASPAR yes 31796753
chr1 116879028 116879042 ONECUT2 JASPAR yes 31796754
chr1 116879028 116879042 ONECUT3 JASPAR yes 31796755
chr1 116879028 116879042 ONECUT1 JASPAR yes 118356317
chr1 116879028 116879042 ONECUT2 JASPAR yes 118356318
chr1 116879028 116879042 ONECUT3 JASPAR yes 118356319
chr1 116879042 116879057 RUNX2 JASPAR yes 31796756
chr1 116879042 116879057 RUNX2 JASPAR yes 118356320
chr1 116879064 116879076 SRF JASPAR yes 31796757
chr1 116879064 116879076 SRF JASPAR yes 118356321
chr1 116879065 116879069 YY1 TRANSFAC yes 31796758
chr1 116879065 116879069 YY1 TRANSFAC yes 118356322
chr1 116879069 116879078 THAP1 JASPAR yes 31796759
chr1 116879069 116879078 THAP1 JASPAR yes 118356323
chr1 116879071 116879092 ZNF263 JASPAR yes 31796760
chr1 116879071 116879092 ZNF263 JASPAR yes 118356324
chr1 116879072 116879076 LFA1 TRANSFAC yes 31796761
chr1 116879072 116879076 LFA1 TRANSFAC yes 118356325
chr1 116879088 116879103 RUNX2 JASPAR yes 31796762
chr1 116879088 116879103 RUNX2 JASPAR yes 118356326
chr1 116879094 116879109 JUND JASPAR yes 31796763
chr1 116879094 116879109 JUND JASPAR yes 118356327
chr1 116879095 116879108 JUN JASPAR yes 31796764
chr1 116879095 116879108 JUN JASPAR yes 118356328
chr1 116879102 116879122 TP63 JASPAR yes 31796765
chr1 116879102 116879122 TP63 JASPAR yes 118356329
chr1 116879106 116879117 NFE2L2 JASPAR yes 31796766
chr1 116879106 116879117 NFE2L2 JASPAR yes 118356330
chr1 116879116 116879125 THAP1 JASPAR yes 31796767
chr1 116879116 116879125 THAP1 JASPAR yes 118356331
chr1 116879179 116879183 LFA1 TRANSFAC yes 31796768
chr1 116879179 116879183 LFA1 TRANSFAC yes 118356332
chr1 116879186 116879196 TEAD1 JASPAR yes 31796769
chr1 116879186 116879196 TEAD4 JASPAR yes 31796770
chr1 116879186 116879196 TEAD1 JASPAR yes 118356333
chr1 116879186 116879196 TEAD4 JASPAR yes 118356334
chr1 116879186 116879198 TEAD1 JASPAR yes 31796771
chr1 116879186 116879198 TEAD1 JASPAR yes 118356335
chr1 116879187 116879195 TEAD3 JASPAR yes 31796772
chr1 116879187 116879195 TEAD3 JASPAR yes 118356336
chr1 116879193 116879209 ZNF143 JASPAR yes 31796773
chr1 116879193 116879209 ZNF143 JASPAR yes 118356337
SNP sites on vista3050[chr1:116878887-116879201]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 116879031 rs17035602 G A,T
ONECUT1 ONECUT2 ONECUT3 PAX6 ZBED1
587785
chr1 116879157 rs192604736 G A no 587786
Genes possibly regulated by vista3050[chr1:116878887-116879201]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 116915290 116952883 + ATP1A1 ENSG00000163399.11 116915290 0.88 1.0 1059 63911
chr1 116915890 116926718 - AL136376.1 ENSG00000269279.1 116926718 0.99 1.0 1060 52483
Expression level of Genes
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miRNAs possibly regulated by vista3050[chr1:116878887-116879201]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results