EnhancerDB
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  3. vista3051[chr1:116918317-116918655]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3051[chr1:116918317-116918655]
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Tissue distribution of vista3051
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Transcription factor that possibly regulate vista3051[chr1:116918317-116918655]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 116918336 116918350 POU4F1 JASPAR yes 31802003
chr1 116918336 116918350 POU4F1 JASPAR yes 118356338
chr1 116918336 116918352 POU4F2 JASPAR yes 31802004
chr1 116918336 116918352 POU4F3 JASPAR yes 31802005
chr1 116918336 116918352 POU4F2 JASPAR yes 118356339
chr1 116918336 116918352 POU4F3 JASPAR yes 118356340
chr1 116918341 116918345 YY1 TRANSFAC yes 31802006
chr1 116918341 116918345 YY1 TRANSFAC yes 118356341
chr1 116918352 116918363 NFKB1 JASPAR yes 31802007
chr1 116918352 116918363 NFKB1 JASPAR yes 118356342
chr1 116918356 116918366 NFATC3 JASPAR yes 31802008
chr1 116918356 116918366 NFATC3 JASPAR yes 118356343
chr1 116918357 116918364 NFATC2 JASPAR yes 31802009
chr1 116918357 116918364 NFATC2 JASPAR yes 118356344
chr1 116918366 116918371 TFAP2A TRANSFAC yes 31802010
chr1 116918366 116918371 TFAP2A TRANSFAC yes 118356345
chr1 116918366 116918372 MZF1 JASPAR yes 31802011
chr1 116918366 116918372 MZF1 JASPAR yes 118356346
chr1 116918367 116918377 GSC2 JASPAR yes 31802012
chr1 116918367 116918377 GSC JASPAR yes 31802013
chr1 116918367 116918377 GSC2 JASPAR yes 118356347
chr1 116918367 116918377 GSC JASPAR yes 118356348
chr1 116918368 116918376 OTX1 JASPAR yes 31802014
chr1 116918368 116918376 OTX2 JASPAR yes 31802015
chr1 116918368 116918376 RHOXF1 JASPAR yes 31802016
chr1 116918368 116918376 OTX1 JASPAR yes 118356349
chr1 116918368 116918376 OTX2 JASPAR yes 118356350
chr1 116918368 116918376 RHOXF1 JASPAR yes 118356351
chr1 116918368 116918377 PITX3 JASPAR yes 31802017
chr1 116918368 116918377 PITX3 JASPAR yes 118356352
chr1 116918390 116918397 JUN TRANSFAC yes 31802018
chr1 116918390 116918397 JUN TRANSFAC yes 118356353
chr1 116918407 116918417 EN2 JASPAR yes 31802019
chr1 116918407 116918417 ESX1 JASPAR yes 31802020
chr1 116918407 116918417 GBX1 JASPAR yes 31802021
chr1 116918407 116918417 GBX2 JASPAR yes 31802022
chr1 116918407 116918417 HESX1 JASPAR yes 31802023
chr1 116918407 116918417 LBX2 JASPAR yes 31802024
chr1 116918407 116918417 LHX2 JASPAR yes 31802025
chr1 116918407 116918417 RAX JASPAR yes 31802026
chr1 116918407 116918417 EN2 JASPAR yes 118356354
chr1 116918407 116918417 ESX1 JASPAR yes 118356355
chr1 116918407 116918417 GBX1 JASPAR yes 118356356
chr1 116918407 116918417 GBX2 JASPAR yes 118356357
chr1 116918407 116918417 HESX1 JASPAR yes 118356358
chr1 116918407 116918417 LBX2 JASPAR yes 118356359
chr1 116918407 116918417 LHX2 JASPAR yes 118356360
chr1 116918407 116918417 RAX JASPAR yes 118356361
chr1 116918408 116918416 DLX6 JASPAR yes 31802027
chr1 116918408 116918416 MSX2 JASPAR yes 31802028
chr1 116918408 116918416 DLX6 JASPAR yes 118356362
chr1 116918408 116918416 MSX2 JASPAR yes 118356363
chr1 116918417 116918420 MYB TRANSFAC yes 31802029
chr1 116918417 116918420 MYB TRANSFAC yes 118356364
chr1 116918421 116918426 ETS2 TRANSFAC yes 31802030
chr1 116918421 116918426 ETS2 TRANSFAC yes 118356365
chr1 116918439 116918454 HNF1A JASPAR yes 31802031
chr1 116918439 116918454 HNF1A JASPAR yes 118356366
chr1 116918443 116918457 NR2F1 JASPAR yes 31802032
chr1 116918443 116918457 NR2F1 JASPAR yes 118356367
chr1 116918447 116918457 RORA JASPAR yes 31802033
chr1 116918447 116918457 RORA JASPAR yes 118356368
chr1 116918448 116918459 ESRRB JASPAR yes 31802034
chr1 116918448 116918459 ESRRB JASPAR yes 118356369
chr1 116918449 116918467 ESR2 JASPAR yes 31802035
chr1 116918449 116918467 ESR2 JASPAR yes 118356370
chr1 116918449 116918469 PPARG JASPAR yes 31802036
chr1 116918449 116918469 PPARG JASPAR yes 118356371
chr1 116918452 116918456 ESR1 TRANSFAC yes 31802037
chr1 116918452 116918456 ESR1 TRANSFAC yes 118356372
chr1 116918464 116918485 ZNF263 JASPAR yes 31802038
chr1 116918464 116918485 ZNF263 JASPAR yes 118356373
chr1 116918467 116918477 MZF1 JASPAR yes 31802039
chr1 116918467 116918477 MZF1 JASPAR yes 118356374
chr1 116918470 116918476 SP1 TRANSFAC yes 31802040
chr1 116918470 116918476 SP1 TRANSFAC yes 118356375
chr1 116918470 116918480 SP1 JASPAR yes 31802041
chr1 116918470 116918480 SP1 JASPAR yes 118356376
chr1 116918490 116918496 SOX10 JASPAR yes 31802042
chr1 116918490 116918496 SOX10 JASPAR yes 118356377
chr1 116918513 116918517 YY1 TRANSFAC yes 31802043
chr1 116918513 116918517 YY1 TRANSFAC yes 118356378
chr1 116918557 116918561 YY1 TRANSFAC yes 31802044
chr1 116918557 116918561 YY1 TRANSFAC yes 118356379
chr1 116918562 116918583 IRF1 JASPAR yes 31802045
chr1 116918562 116918583 IRF1 JASPAR yes 118356380
chr1 116918564 116918579 IRF9 JASPAR yes 31802046
chr1 116918564 116918579 IRF9 JASPAR yes 118356381
chr1 116918565 116918579 IRF7 JASPAR yes 31802047
chr1 116918565 116918579 IRF8 JASPAR yes 31802048
chr1 116918565 116918579 IRF7 JASPAR yes 118356382
chr1 116918565 116918579 IRF8 JASPAR yes 118356383
chr1 116918566 116918580 STAT1 JASPAR yes 31802049
chr1 116918566 116918580 STAT1 JASPAR yes 118356384
chr1 116918566 116918581 PRDM1 JASPAR yes 31802050
chr1 116918566 116918581 STAT2 JASPAR yes 31802051
chr1 116918566 116918581 PRDM1 JASPAR yes 118356385
chr1 116918566 116918581 STAT2 JASPAR yes 118356386
chr1 116918567 116918579 IRF1 JASPAR yes 31802052
chr1 116918567 116918579 IRF1 JASPAR yes 118356387
chr1 116918571 116918577 TCF4 TRANSFAC yes 31802053
chr1 116918571 116918577 TCF4 TRANSFAC yes 118356388
chr1 116918578 116918588 MSC JASPAR yes 31802054
chr1 116918578 116918588 MYF6 JASPAR yes 31802055
chr1 116918578 116918588 MSC JASPAR yes 118356389
chr1 116918578 116918588 MYF6 JASPAR yes 118356390
chr1 116918587 116918598 NFE2L2 JASPAR yes 31802056
chr1 116918587 116918598 NFE2L2 JASPAR yes 118356391
chr1 116918588 116918599 FOS JASPAR yes 31802057
chr1 116918588 116918599 JUND JASPAR yes 31802058
chr1 116918588 116918599 FOS JASPAR yes 118356392
chr1 116918588 116918599 JUND JASPAR yes 118356393
chr1 116918589 116918600 FOSL2 JASPAR yes 31802059
chr1 116918589 116918600 JUNB JASPAR yes 31802060
chr1 116918589 116918600 FOSL2 JASPAR yes 118356394
chr1 116918589 116918600 JUNB JASPAR yes 118356395
chr1 116918589 116918603 JUN JASPAR yes 31802061
chr1 116918589 116918603 JUN JASPAR yes 118356396
chr1 116918590 116918596 JUN TRANSFAC yes 31802062
chr1 116918590 116918596 JUN TRANSFAC yes 118356397
chr1 116918614 116918635 IRF1 JASPAR yes 31802063
chr1 116918614 116918635 IRF1 JASPAR yes 118356398
chr1 116918622 116918637 FOXP1 JASPAR yes 31802064
chr1 116918622 116918637 FOXP1 JASPAR yes 118356399
chr1 116918639 116918649 HOXA13 JASPAR yes 31802065
chr1 116918639 116918649 HOXB13 JASPAR yes 31802066
chr1 116918639 116918649 HOXD13 JASPAR yes 31802067
chr1 116918639 116918649 HOXA13 JASPAR yes 118356400
chr1 116918639 116918649 HOXB13 JASPAR yes 118356401
chr1 116918639 116918649 HOXD13 JASPAR yes 118356402
chr1 116918639 116918650 HOXA10 JASPAR yes 31802068
chr1 116918639 116918650 HOXA10 JASPAR yes 118356403
chr1 116918640 116918649 CDX1 JASPAR yes 31802069
chr1 116918640 116918649 CDX1 JASPAR yes 118356404
chr1 116918640 116918651 CDX2 JASPAR yes 31802070
chr1 116918640 116918651 CDX2 JASPAR yes 118356405
SNP sites on vista3051[chr1:116918317-116918655]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 116918385 rs757578 T C no 588213
chr1 116918464 rs78036795 A G
ESR2 PPARG ZNF263
588214
chr1 116918567 rs7528832 A G
IRF1 IRF7 IRF8 IRF9 PRDM1 STAT1 STAT2
588215
chr1 116918612 rs149712221 A C no 588216
Genes possibly regulated by vista3051[chr1:116918317-116918655]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 116915290 116952883 + ATP1A1 ENSG00000163399.11 116915290 0.88 1.0 1059 96973
chr1 116915890 116926718 - AL136376.1 ENSG00000269279.1 116926718 0.99 1.0 1060 91937
Expression level of Genes
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miRNAs possibly regulated by vista3051[chr1:116918317-116918655]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results