EnhancerDB
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  3. vista3056[chr1:117030831-117031034]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3056[chr1:117030831-117031034]
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Tissue distribution of vista3056
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Transcription factor that possibly regulate vista3056[chr1:117030831-117031034]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117030712 117030975 TFAP2C UCSC Txn Factor no Conserved 107824319
chr1 117030829 117030848 REST JASPAR yes 31812670
chr1 117030829 117030848 REST JASPAR yes 118356670
chr1 117030837 117030846 NKX3-2 JASPAR yes 31812671
chr1 117030837 117030846 NKX3-2 JASPAR yes 118356671
chr1 117030842 117030857 TFAP2A JASPAR yes 31812672
chr1 117030842 117030857 TFAP2A JASPAR yes 118356672
chr1 117030852 117030856 LFA1 TRANSFAC yes 31812673
chr1 117030852 117030856 LFA1 TRANSFAC yes 118356673
chr1 117030855 117030859 YY1 TRANSFAC yes 31812674
chr1 117030855 117030859 YY1 TRANSFAC yes 118356674
chr1 117030877 117030881 YY1 TRANSFAC yes 31812675
chr1 117030877 117030881 YY1 TRANSFAC yes 118356675
chr1 117030886 117030890 YY1 TRANSFAC yes 31812676
chr1 117030886 117030890 YY1 TRANSFAC yes 118356676
chr1 117030918 117030937 PAX5 JASPAR yes 31812677
chr1 117030918 117030937 PAX5 JASPAR yes 118356677
chr1 117030926 117030937 NFE2L2 JASPAR yes 31812678
chr1 117030926 117030937 NFE2L2 JASPAR yes 118356678
chr1 117030946 117030950 YY1 TRANSFAC yes 31812679
chr1 117030946 117030950 YY1 TRANSFAC yes 118356679
chr1 117030946 117030954 HOXA5 JASPAR yes 31812680
chr1 117030946 117030954 HOXA5 JASPAR yes 118356680
chr1 117030957 117030975 MAFF JASPAR yes 31812681
chr1 117030957 117030975 MAFF JASPAR yes 118356681
chr1 117030958 117030973 MAFK JASPAR yes 31812682
chr1 117030958 117030973 MAFK JASPAR yes 118356682
chr1 117031027 117031039 GRHL1 JASPAR yes 31812683
chr1 117031027 117031039 GRHL1 JASPAR yes 118356683
chr1 117031028 117031038 TFCP2 JASPAR yes 31812684
chr1 117031028 117031038 TFCP2 JASPAR yes 118356684
chr1 117031032 117031037 MYC TRANSFAC yes 31812685
chr1 117031032 117031037 MYC TRANSFAC yes 118356685
SNP sites on vista3056[chr1:117030831-117031034]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117030848 rs115786181 C T
REST TFAP2A TFAP2C
589155
chr1 117030864 rs74614018 T C
TFAP2C
589156
chr1 117030982 rs10924102 C T no 589157
Genes possibly regulated by vista3056[chr1:117030831-117031034]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117057157 117113661 - CD58 ENSG00000116815.11 117113661 0.93 0.99 1061 17373
Expression level of Genes
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miRNAs possibly regulated by vista3056[chr1:117030831-117031034]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results