EnhancerDB
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  3. vista30705[chr2:24944371-24944796]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30705[chr2:24944371-24944796]
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Tissue distribution of vista30705
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Transcription factor that possibly regulate vista30705[chr2:24944371-24944796]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 24944251 24944678 RELA UCSC Txn Factor no Conserved 108431356
chr2 24944300 24944616 EBF1 UCSC Txn Factor no Conserved 108431357
chr2 24944352 24944578 RUNX3 UCSC Txn Factor no Conserved 108431358
chr2 24944367 24944594 BATF UCSC Txn Factor no Conserved 108431359
chr2 24944393 24944398 MYC TRANSFAC yes 22018803
chr2 24944393 24944398 MYC TRANSFAC yes 72429481
chr2 24944417 24944427 SP1 JASPAR yes 22018804
chr2 24944417 24944427 SP1 JASPAR yes 72429482
chr2 24944420 24944425 SP1 TRANSFAC yes 22018805
chr2 24944420 24944425 SP1 TRANSFAC yes 72429483
chr2 24944422 24944427 TFAP2A TRANSFAC yes 22018806
chr2 24944422 24944427 TFAP2A TRANSFAC yes 72429484
chr2 24944422 24944428 MZF1 JASPAR yes 22018807
chr2 24944422 24944428 MZF1 JASPAR yes 72429485
chr2 24944422 24944435 NFKB1 JASPAR yes 22018808
chr2 24944422 24944435 NFKB2 JASPAR yes 22018809
chr2 24944422 24944435 NFKB1 JASPAR yes 72429486
chr2 24944422 24944435 NFKB2 JASPAR yes 72429487
chr2 24944423 24944434 NFKB1 JASPAR yes 22018810
chr2 24944423 24944434 NFKB1 JASPAR yes 72429488
chr2 24944424 24944434 NFKB1 JASPAR yes 22018811
chr2 24944424 24944434 RELA JASPAR yes 22018812
chr2 24944424 24944434 NFKB1 JASPAR yes 72429489
chr2 24944424 24944434 RELA JASPAR yes 72429490
chr2 24944424 24944435 NFKB1 JASPAR yes 22018813
chr2 24944424 24944435 NFKB1 JASPAR yes 72429491
chr2 24944424 24944443 CTCF JASPAR yes 22018814
chr2 24944424 24944443 CTCF JASPAR yes 72429492
chr2 24944458 24944471 NFKB1 JASPAR yes 22018815
chr2 24944458 24944471 NFKB2 JASPAR yes 22018816
chr2 24944458 24944471 NFKB1 JASPAR yes 72429493
chr2 24944458 24944471 NFKB2 JASPAR yes 72429494
chr2 24944459 24944469 RELA JASPAR yes 22018817
chr2 24944459 24944469 REL JASPAR yes 22018818
chr2 24944459 24944469 RELA JASPAR yes 72429495
chr2 24944459 24944469 REL JASPAR yes 72429496
chr2 24944459 24944470 NFKB1 JASPAR yes 22018819
chr2 24944459 24944470 NFKB1 JASPAR yes 72429497
chr2 24944460 24944470 NFKB1 JASPAR yes 22018820
chr2 24944460 24944470 NFKB1 JASPAR yes 72429498
chr2 24944471 24944475 LFA1 TRANSFAC yes 22018821
chr2 24944471 24944475 LFA1 TRANSFAC yes 72429499
chr2 24944479 24944497 SRF JASPAR yes 22018822
chr2 24944479 24944497 SRF JASPAR yes 72429500
chr2 24944483 24944487 YY1 TRANSFAC yes 22018823
chr2 24944483 24944487 YY1 TRANSFAC yes 72429501
chr2 24944484 24944495 BATF JASPAR yes 22018824
chr2 24944484 24944495 BATF JASPAR yes 72429502
chr2 24944486 24944497 FOS JASPAR yes 22018825
chr2 24944486 24944497 FOSL1 JASPAR yes 22018826
chr2 24944486 24944497 FOS JASPAR yes 72429503
chr2 24944486 24944497 FOSL1 JASPAR yes 72429504
chr2 24944487 24944496 JDP2 JASPAR yes 22018827
chr2 24944487 24944496 JDP2 JASPAR yes 72429505
chr2 24944487 24944498 JUNB JASPAR yes 22018828
chr2 24944487 24944498 JUNB JASPAR yes 72429506
chr2 24944487 24944501 JUN JASPAR yes 22018829
chr2 24944487 24944501 JUN JASPAR yes 72429507
chr2 24944488 24944499 BATF JASPAR yes 22018830
chr2 24944488 24944499 BATF JASPAR yes 72429508
chr2 24944507 24944528 REST JASPAR yes 22018831
chr2 24944507 24944528 REST JASPAR yes 72429509
chr2 24944516 24944530 TLX1 JASPAR yes 22018832
chr2 24944516 24944530 TLX1 JASPAR yes 72429510
chr2 24944518 24944530 PKNOX1 JASPAR yes 22018833
chr2 24944518 24944530 PKNOX2 JASPAR yes 22018834
chr2 24944518 24944530 TGIF1 JASPAR yes 22018835
chr2 24944518 24944530 TGIF2 JASPAR yes 22018836
chr2 24944518 24944530 PKNOX1 JASPAR yes 72429511
chr2 24944518 24944530 PKNOX2 JASPAR yes 72429512
chr2 24944518 24944530 TGIF1 JASPAR yes 72429513
chr2 24944518 24944530 TGIF2 JASPAR yes 72429514
chr2 24944519 24944528 SNAI2 JASPAR yes 22018837
chr2 24944519 24944528 SNAI2 JASPAR yes 72429515
chr2 24944519 24944529 HEY2 JASPAR yes 22018838
chr2 24944519 24944529 ID4 JASPAR yes 22018839
chr2 24944519 24944529 TCF4 JASPAR yes 22018840
chr2 24944519 24944529 HEY2 JASPAR yes 72429516
chr2 24944519 24944529 ID4 JASPAR yes 72429517
chr2 24944519 24944529 TCF4 JASPAR yes 72429518
chr2 24944560 24944572 NHLH1 JASPAR yes 22018841
chr2 24944560 24944572 NHLH1 JASPAR yes 72429519
chr2 24944561 24944571 MSC JASPAR yes 22018842
chr2 24944561 24944571 MYF6 JASPAR yes 22018843
chr2 24944561 24944571 NHLH1 JASPAR yes 22018844
chr2 24944561 24944571 TFAP4 JASPAR yes 22018845
chr2 24944561 24944571 MSC JASPAR yes 72429520
chr2 24944561 24944571 MYF6 JASPAR yes 72429521
chr2 24944561 24944571 NHLH1 JASPAR yes 72429522
chr2 24944561 24944571 TFAP4 JASPAR yes 72429523
chr2 24944561 24944573 TAL1 JASPAR yes 22018846
chr2 24944561 24944573 TAL1 JASPAR yes 72429524
chr2 24944566 24944585 PAX5 JASPAR yes 22018847
chr2 24944566 24944585 PAX5 JASPAR yes 72429525
chr2 24944573 24944579 YY1 JASPAR yes 22018848
chr2 24944573 24944579 YY1 JASPAR yes 72429526
chr2 24944579 24944589 EVX1 JASPAR yes 22018849
chr2 24944579 24944589 EVX1 JASPAR yes 72429527
chr2 24944585 24944590 GATA2 JASPAR yes 22018850
chr2 24944585 24944590 GATA2 JASPAR yes 72429528
chr2 24944609 24944614 ETS2 TRANSFAC yes 22018851
chr2 24944609 24944614 ETS2 TRANSFAC yes 72429529
chr2 24944609 24944625 SRF JASPAR yes 22018852
chr2 24944609 24944625 SRF JASPAR yes 72429530
chr2 24944611 24944626 FOXA1 JASPAR yes 22018853
chr2 24944611 24944626 FOXA1 JASPAR yes 72429531
chr2 24944613 24944625 FOXC2 JASPAR yes 22018854
chr2 24944613 24944625 FOXC2 JASPAR yes 72429532
chr2 24944615 24944619 YY1 TRANSFAC yes 22018855
chr2 24944615 24944619 YY1 TRANSFAC yes 72429533
chr2 24944615 24944626 FOXA1 JASPAR yes 22018856
chr2 24944615 24944626 FOXA1 JASPAR yes 72429534
chr2 24944653 24944668 STAT1 JASPAR yes 22018857
chr2 24944653 24944668 STAT1 JASPAR yes 72429535
chr2 24944655 24944666 STAT1 JASPAR yes 22018858
chr2 24944655 24944666 STAT3 JASPAR yes 22018859
chr2 24944655 24944666 STAT1 JASPAR yes 72429536
chr2 24944655 24944666 STAT3 JASPAR yes 72429537
chr2 24944656 24944664 STAT6 TRANSFAC yes 22018860
chr2 24944656 24944664 STAT6 TRANSFAC yes 72429538
chr2 24944660 24944671 NFKB1 JASPAR yes 22018861
chr2 24944660 24944671 NFKB1 JASPAR yes 72429539
chr2 24944661 24944672 NFKB1 JASPAR yes 22018862
chr2 24944661 24944672 NFKB1 JASPAR yes 72429540
chr2 24944667 24944674 SPIB JASPAR yes 22018863
chr2 24944667 24944674 SPIB JASPAR yes 72429541
chr2 24944675 24944685 NFATC3 JASPAR yes 22018864
chr2 24944675 24944685 NFATC3 JASPAR yes 72429542
chr2 24944675 24944693 NR3C1 JASPAR yes 22018865
chr2 24944675 24944693 NR3C1 JASPAR yes 72429543
chr2 24944677 24944684 NFATC2 JASPAR yes 22018866
chr2 24944677 24944684 NFATC2 JASPAR yes 72429544
chr2 24944690 24944703 SCRT2 JASPAR yes 22018867
chr2 24944690 24944703 SCRT2 JASPAR yes 72429545
chr2 24944704 24944718 IRF7 JASPAR yes 22018868
chr2 24944704 24944718 IRF7 JASPAR yes 72429546
chr2 24944704 24944719 IRF9 JASPAR yes 22018869
chr2 24944704 24944719 IRF9 JASPAR yes 72429547
chr2 24944717 24944738 IRF1 JASPAR yes 22018870
chr2 24944717 24944738 IRF1 JASPAR yes 72429548
chr2 24944721 24944732 CEBPB JASPAR yes 22018871
chr2 24944721 24944732 CEBPB JASPAR yes 72429549
chr2 24944721 24944735 IRF8 JASPAR yes 22018872
chr2 24944721 24944735 IRF8 JASPAR yes 72429550
chr2 24944722 24944733 CEBPA JASPAR yes 22018873
chr2 24944722 24944733 CEBPA JASPAR yes 72429551
chr2 24944735 24944750 STAT2 JASPAR yes 22018874
chr2 24944735 24944750 STAT2 JASPAR yes 72429552
chr2 24944737 24944745 FOXO3 JASPAR yes 22018875
chr2 24944737 24944745 FOXO3 JASPAR yes 72429553
chr2 24944737 24944747 NFATC3 JASPAR yes 22018876
chr2 24944737 24944747 NFATC3 JASPAR yes 72429554
chr2 24944743 24944747 YY1 TRANSFAC yes 22018877
chr2 24944743 24944747 YY1 TRANSFAC yes 72429555
chr2 24944746 24944761 FOXP1 JASPAR yes 22018878
chr2 24944746 24944761 FOXP1 JASPAR yes 72429556
SNP sites on vista30705[chr2:24944371-24944796]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 24944389 rs147882803 C T
BATF EBF1 RELA RUNX3
5589956
chr2 24944414 rs62142348 C T
BATF EBF1 RELA RUNX3
5589957
chr2 24944543 rs150162476 C G,T
BATF EBF1 RELA RUNX3
5589958
chr2 24944633 rs74361878 A G
RELA
5589959
chr2 24944747 rs562555692 T C
FOXP1 NFATC3 STAT2 YY1
5589960
chr2 24944793 rs56033904 A G no 5589961
Genes possibly regulated by vista30705[chr2:24944371-24944796]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 25012603 25016251 - PTRHD1 ENSG00000184924.5 25016251 0.67 1.0 2174 28545
chr2 25016005 25045245 + CENPO ENSG00000138092.6 25016005 0.78 1.0 2175 28791
Expression level of Genes
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miRNAs possibly regulated by vista30705[chr2:24944371-24944796]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results