EnhancerDB
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  3. vista3071[chr1:117111804-117112156]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3071[chr1:117111804-117112156]
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Tissue distribution of vista3071
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Transcription factor that possibly regulate vista3071[chr1:117111804-117112156]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117110307 117114109 POLR2A UCSC Txn Factor no Conserved 107824682
chr1 117110307 117114109 POLR2A UCSC Txn Factor no Conserved 107824683
chr1 117110307 117114109 POLR2A UCSC Txn Factor no Conserved 107824684
chr1 117111804 117111816 INSM1 JASPAR yes 118357450
chr1 117111817 117111825 ISX JASPAR yes 118357451
chr1 117111817 117111825 LHX9 JASPAR yes 118357452
chr1 117111817 117111825 LMX1B JASPAR yes 118357453
chr1 117111817 117111825 PRRX1 JASPAR yes 118357454
chr1 117111817 117111825 RAX2 JASPAR yes 118357455
chr1 117111817 117111825 SHOX JASPAR yes 118357456
chr1 117111817 117111825 UNCX JASPAR yes 118357457
chr1 117111820 117111829 PITX3 JASPAR yes 118357458
chr1 117111820 117111830 GSC2 JASPAR yes 118357459
chr1 117111820 117111830 GSC JASPAR yes 118357460
chr1 117111821 117111829 OTX1 JASPAR yes 118357461
chr1 117111821 117111829 OTX2 JASPAR yes 118357462
chr1 117111821 117111829 RHOXF1 JASPAR yes 118357463
chr1 117111834 117111839 GATA1 TRANSFAC yes 118357464
chr1 117111838 117111859 ZNF263 JASPAR yes 118357465
chr1 117111846 117111861 RFX5 JASPAR yes 118357466
chr1 117111847 117111853 MZF1 JASPAR yes 118357467
chr1 117111854 117111865 GCM1 JASPAR yes 118357468
chr1 117111854 117111871 RXRA JASPAR yes 118357469
chr1 117111855 117111865 GCM2 JASPAR yes 118357470
chr1 117111869 117111880 EBF1 JASPAR yes 118357471
chr1 117111870 117111876 MZF1 JASPAR yes 118357472
chr1 117111880 117111884 YY1 TRANSFAC yes 118357473
chr1 117111895 117111915 ESR1 JASPAR yes 118357474
chr1 117111899 117111917 ESR2 JASPAR yes 118357475
chr1 117111906 117111924 RARA JASPAR yes 118357476
chr1 117111911 117111932 ZNF263 JASPAR yes 118357477
chr1 117111912 117111933 ZNF263 JASPAR yes 118357478
chr1 117111921 117111942 ZNF263 JASPAR yes 118357479
chr1 117111923 117111933 SP1 JASPAR yes 118357480
chr1 117111931 117111935 H1TF2 TRANSFAC yes 118357481
chr1 117111931 117111935 NFE TRANSFAC yes 118357482
chr1 117111931 117111935 SRF TRANSFAC yes 118357483
chr1 117111950 117111964 SPI1 JASPAR yes 118357484
chr1 117111950 117111964 SPIC JASPAR yes 118357485
chr1 117111951 117111959 EHF JASPAR yes 118357486
chr1 117111953 117111960 SPIB JASPAR yes 118357487
chr1 117111958 117111964 LEF1 TRANSFAC yes 118357488
chr1 117111958 117111964 SOX10 JASPAR yes 118357489
chr1 117111967 117111970 MYB TRANSFAC yes 118357490
chr1 117111993 117111997 H4TF2 TRANSFAC yes 118357491
chr1 117112010 117112021 EBF1 JASPAR yes 118357492
chr1 117112044 117112059 TFAP2A JASPAR yes 118357493
chr1 117112056 117112074 MAFF JASPAR yes 118357494
chr1 117112057 117112072 MAFK JASPAR yes 118357495
chr1 117112061 117112072 NRL JASPAR yes 118357496
chr1 117112079 117112083 YY1 TRANSFAC yes 118357497
chr1 117112082 117112092 MAX JASPAR yes 118357498
chr1 117112082 117112093 USF2 JASPAR yes 118357499
chr1 117112086 117112101 TP53 JASPAR yes 118357500
chr1 117112089 117112103 MTF1 JASPAR yes 118357501
chr1 117112127 117112132 GATA2 JASPAR yes 118357502
chr1 117112129 117112140 E2F6 JASPAR yes 118357503
chr1 117112132 117112146 GLIS3 JASPAR yes 118357504
SNP sites on vista3071[chr1:117111804-117112156]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117111891 rs148310196 C T
POLR2A
589779
chr1 117111938 rs181551064 C T
POLR2A ZNF263
589780
chr1 117111961 rs111240467 T C
LEF1 POLR2A SOX10 SPI1 SPIC
589781
chr1 117112026 rs371342585 T C
POLR2A
589782
Genes possibly regulated by vista3071[chr1:117111804-117112156]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117057157 117113661 - CD58 ENSG00000116815.11 117113661 0.93 0.99 1061 98495
chr1 117117031 117210375 - IGSF3 ENSG00000143061.13 117210375 0.85 1.0 1062 1781
Expression level of Genes
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miRNAs possibly regulated by vista3071[chr1:117111804-117112156]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results