EnhancerDB
  1. Home
  2. Enhancers
  3. vista30715[chr2:25352140-25352468]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30715[chr2:25352140-25352468]
Back to top
Tissue distribution of vista30715
Back to top
Transcription factor that possibly regulate vista30715[chr2:25352140-25352468]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 25352034 25352274 EGR1 UCSC Txn Factor no Conserved 108431362
chr2 25352108 25352542 CTCF UCSC Txn Factor no Conserved 108431363
chr2 25352147 25352421 RAD21 UCSC Txn Factor no Conserved 108431364
chr2 25352152 25352160 RHOXF1 JASPAR yes 22019180
chr2 25352188 25352195 SP1 TRANSFAC yes 22019181
chr2 25352188 25352198 SP1 JASPAR yes 22019182
chr2 25352189 25352197 SP1 TRANSFAC yes 22019183
chr2 25352190 25352195 SP1 TRANSFAC yes 22019184
chr2 25352191 25352196 SP1 TRANSFAC yes 22019185
chr2 25352191 25352197 SP1 TRANSFAC yes 22019186
chr2 25352192 25352200 SP1 TRANSFAC yes 22019187
chr2 25352192 25352200 WT1 TRANSFAC yes 22019188
chr2 25352194 25352201 SP1 TRANSFAC yes 22019189
chr2 25352194 25352204 SP1 JASPAR yes 22019190
chr2 25352195 25352203 SP1 TRANSFAC yes 22019191
chr2 25352196 25352201 SP1 TRANSFAC yes 22019192
chr2 25352197 25352202 SP1 TRANSFAC yes 22019193
chr2 25352197 25352203 SP1 TRANSFAC yes 22019194
chr2 25352198 25352206 SP1 TRANSFAC yes 22019195
chr2 25352198 25352206 WT1 TRANSFAC yes 22019196
chr2 25352200 25352207 SP1 TRANSFAC yes 22019197
chr2 25352200 25352210 SP1 JASPAR yes 22019198
chr2 25352201 25352209 SP1 TRANSFAC yes 22019199
chr2 25352202 25352207 SP1 TRANSFAC yes 22019200
chr2 25352203 25352208 SP1 TRANSFAC yes 22019201
chr2 25352203 25352209 SP1 TRANSFAC yes 22019202
chr2 25352204 25352212 SP1 TRANSFAC yes 22019203
chr2 25352204 25352212 WT1 TRANSFAC yes 22019204
chr2 25352206 25352213 SP1 TRANSFAC yes 22019205
chr2 25352206 25352216 SP1 JASPAR yes 22019206
chr2 25352207 25352215 SP1 TRANSFAC yes 22019207
chr2 25352208 25352213 SP1 TRANSFAC yes 22019208
chr2 25352209 25352214 SP1 TRANSFAC yes 22019209
chr2 25352209 25352215 SP1 TRANSFAC yes 22019210
chr2 25352210 25352218 SP1 TRANSFAC yes 22019211
chr2 25352210 25352218 WT1 TRANSFAC yes 22019212
chr2 25352212 25352219 SP1 TRANSFAC yes 22019213
chr2 25352212 25352222 SP1 JASPAR yes 22019214
chr2 25352212 25352232 RREB1 JASPAR yes 22019215
chr2 25352212 25352233 ZNF263 JASPAR yes 22019216
chr2 25352213 25352221 SP1 TRANSFAC yes 22019217
chr2 25352213 25352222 SP1 TRANSFAC yes 22019218
chr2 25352214 25352219 SP1 TRANSFAC yes 22019219
chr2 25352214 25352234 RREB1 JASPAR yes 22019220
chr2 25352215 25352220 SP1 TRANSFAC yes 22019221
chr2 25352215 25352221 SP1 TRANSFAC yes 22019222
chr2 25352219 25352239 RREB1 JASPAR yes 22019223
chr2 25352221 25352241 RREB1 JASPAR yes 22019224
chr2 25352222 25352242 RREB1 JASPAR yes 22019225
chr2 25352224 25352244 RREB1 JASPAR yes 22019226
chr2 25352226 25352246 RREB1 JASPAR yes 22019227
chr2 25352227 25352232 SP1 TRANSFAC yes 22019228
chr2 25352227 25352247 RREB1 JASPAR yes 22019229
chr2 25352228 25352248 RREB1 JASPAR yes 22019230
chr2 25352229 25352249 RREB1 JASPAR yes 22019231
chr2 25352231 25352251 RREB1 JASPAR yes 22019232
chr2 25352232 25352252 RREB1 JASPAR yes 22019233
chr2 25352233 25352253 RREB1 JASPAR yes 22019234
chr2 25352236 25352256 RREB1 JASPAR yes 22019235
chr2 25352237 25352247 SP1 JASPAR yes 22019236
chr2 25352239 25352244 SP1 TRANSFAC yes 22019237
chr2 25352242 25352252 SP1 JASPAR yes 22019238
chr2 25352244 25352249 SP1 TRANSFAC yes 22019239
chr2 25352254 25352273 CTCF JASPAR yes 22019240
chr2 25352256 25352268 TAL1 JASPAR yes 22019241
chr2 25352258 25352264 YY1 JASPAR yes 22019242
chr2 25352258 25352268 NEUROG2 JASPAR yes 22019243
chr2 25352258 25352270 TAL1 JASPAR yes 22019244
chr2 25352268 25352283 MEF2C JASPAR yes 22019245
chr2 25352305 25352320 HNF4A JASPAR yes 22019246
chr2 25352319 25352330 NFKB1 JASPAR yes 22019247
chr2 25352340 25352344 NFE TRANSFAC yes 22019248
chr2 25352341 25352354 ZBTB18 JASPAR yes 22019249
chr2 25352381 25352398 RARA JASPAR yes 22019250
chr2 25352403 25352421 IRF2 JASPAR yes 22019251
chr2 25352404 25352425 IRF1 JASPAR yes 22019252
chr2 25352406 25352421 PRDM1 JASPAR yes 22019253
chr2 25352406 25352421 STAT2 JASPAR yes 22019254
chr2 25352407 25352421 STAT1 JASPAR yes 22019255
chr2 25352407 25352428 ZNF263 JASPAR yes 22019256
chr2 25352411 25352416 ETS2 TRANSFAC yes 22019257
chr2 25352411 25352432 ZNF263 JASPAR yes 22019258
chr2 25352413 25352434 ZNF263 JASPAR yes 22019259
chr2 25352415 25352426 E2F6 JASPAR yes 22019260
chr2 25352416 25352437 ZNF263 JASPAR yes 22019261
chr2 25352417 25352438 ZNF263 JASPAR yes 22019262
chr2 25352419 25352430 E2F6 JASPAR yes 22019263
chr2 25352419 25352440 ZNF263 JASPAR yes 22019264
chr2 25352420 25352441 ZNF263 JASPAR yes 22019265
chr2 25352422 25352443 ZNF263 JASPAR yes 22019266
chr2 25352426 25352447 ZNF263 JASPAR yes 22019267
chr2 25352430 25352451 ZNF263 JASPAR yes 22019268
chr2 25352431 25352438 SPIB JASPAR yes 22019269
chr2 25352433 25352454 ZNF263 JASPAR yes 22019270
chr2 25352438 25352459 IRF1 JASPAR yes 22019271
chr2 25352444 25352465 IRF1 JASPAR yes 22019272
chr2 25352447 25352461 SPI1 JASPAR yes 22019273
chr2 25352450 25352465 FOXP1 JASPAR yes 22019274
chr2 25352451 25352466 STAT2 JASPAR yes 22019275
chr2 25352453 25352465 IRF1 JASPAR yes 22019276
chr2 25352455 25352461 TCF4 TRANSFAC yes 22019277
SNP sites on vista30715[chr2:25352140-25352468]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 25352200 rs183823891 C G,T
CTCF EGR1 RAD21 SP1 WT1
5592091
chr2 25352230 rs187504345 T C,G
CTCF EGR1 RAD21 RREB1 SP1 ZNF263
5592092
chr2 25352324 rs141162830 GTCC G
CTCF NFKB1 RAD21
5592093
chr2 25352431 rs191961680 T C
CTCF SPIB ZNF263
5592094
Genes possibly regulated by vista30715[chr2:25352140-25352468]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 25264999 25378243 + EFR3B ENSG00000084710.9 25264999 0.83 0.95 2178 12859
chr2 25383722 25391772 - POMC ENSG00000115138.6 25391772 0.68 1.0 2179 60696
Expression level of Genes
Back to top
miRNAs possibly regulated by vista30715[chr2:25352140-25352468]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results