EnhancerDB
  1. Home
  2. Enhancers
  3. vista30716[chr2:25438901-25439135]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30716[chr2:25438901-25439135]
Back to top
Tissue distribution of vista30716
Back to top
Transcription factor that possibly regulate vista30716[chr2:25438901-25439135]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 25438655 25439482 POLR2A UCSC Txn Factor no Conserved 108431365
chr2 25438800 25439148 GABPA UCSC Txn Factor no Conserved 108431366
chr2 25438877 25439138 RUNX3 UCSC Txn Factor no Conserved 108431367
chr2 25438901 25438921 ESR1 JASPAR yes 22019278
chr2 25438901 25438921 ESR1 JASPAR yes 72456646
chr2 25438904 25438922 ESR1 JASPAR yes 22019279
chr2 25438904 25438922 ESR2 JASPAR yes 22019280
chr2 25438904 25438922 ESR1 JASPAR yes 72456647
chr2 25438904 25438922 ESR2 JASPAR yes 72456648
chr2 25438905 25438922 ESR1 JASPAR yes 22019281
chr2 25438905 25438922 ESR1 JASPAR yes 72456649
chr2 25438906 25438921 ESR2 JASPAR yes 22019282
chr2 25438906 25438921 ESR2 JASPAR yes 72456650
chr2 25438907 25438911 ESR1 TRANSFAC yes 22019283
chr2 25438907 25438911 ESR1 TRANSFAC yes 72456651
chr2 25438913 25438934 REST JASPAR yes 22019284
chr2 25438913 25438934 REST JASPAR yes 72456652
chr2 25438928 25438949 REST JASPAR yes 22019285
chr2 25438928 25438949 REST JASPAR yes 72456653
chr2 25438944 25438958 CREB3 JASPAR yes 22019286
chr2 25438944 25438958 CREB3L1 JASPAR yes 22019287
chr2 25438944 25438958 CREB3 JASPAR yes 72456654
chr2 25438944 25438958 CREB3L1 JASPAR yes 72456655
chr2 25438963 25438972 SP1 TRANSFAC yes 22019288
chr2 25438963 25438972 SP1 TRANSFAC yes 72456656
chr2 25438964 25438970 SP1 TRANSFAC yes 22019289
chr2 25438964 25438970 SP1 TRANSFAC yes 72456657
chr2 25438966 25438971 SP1 TRANSFAC yes 22019290
chr2 25438966 25438971 SP1 TRANSFAC yes 72456658
chr2 25438977 25438982 SP1 TRANSFAC yes 22019291
chr2 25438977 25438982 SP1 TRANSFAC yes 72456659
chr2 25438978 25438983 SP1 TRANSFAC yes 22019292
chr2 25438978 25438983 SP1 TRANSFAC yes 72456660
chr2 25438981 25438991 NFKB1 JASPAR yes 22019293
chr2 25438981 25438991 NFKB1 JASPAR yes 72456661
chr2 25438983 25438998 AR JASPAR yes 22019294
chr2 25438983 25438998 AR JASPAR yes 72456662
chr2 25438984 25438994 GABPA JASPAR yes 22019295
chr2 25438984 25438994 GABPA JASPAR yes 72456663
chr2 25438985 25438993 EHF JASPAR yes 22019296
chr2 25438985 25438993 EHF JASPAR yes 72456664
chr2 25438995 25439007 ELF1 JASPAR yes 22019297
chr2 25438995 25439007 ELF1 JASPAR yes 72456665
chr2 25438995 25439009 PLAG1 JASPAR yes 22019298
chr2 25438995 25439009 PLAG1 JASPAR yes 72456666
chr2 25438996 25439010 PLAG1 JASPAR yes 22019299
chr2 25438996 25439010 PLAG1 JASPAR yes 72456667
chr2 25438997 25439006 ELK4 JASPAR yes 22019300
chr2 25438997 25439006 ELK4 JASPAR yes 72456668
chr2 25438997 25439007 GABPA JASPAR yes 22019301
chr2 25438997 25439007 GABPA JASPAR yes 72456669
chr2 25438997 25439008 ELK4 JASPAR yes 22019302
chr2 25438997 25439008 ELK4 JASPAR yes 72456670
chr2 25438999 25439005 ETS1 JASPAR yes 22019303
chr2 25438999 25439005 SPI1 JASPAR yes 22019304
chr2 25438999 25439005 ETS1 JASPAR yes 72456671
chr2 25438999 25439005 SPI1 JASPAR yes 72456672
chr2 25439004 25439017 TFAP2A JASPAR yes 22019305
chr2 25439004 25439017 TFAP2B JASPAR yes 22019306
chr2 25439004 25439017 TFAP2C JASPAR yes 22019307
chr2 25439004 25439017 TFAP2A JASPAR yes 72456673
chr2 25439004 25439017 TFAP2B JASPAR yes 72456674
chr2 25439004 25439017 TFAP2C JASPAR yes 72456675
chr2 25439005 25439017 TFAP2A JASPAR yes 22019308
chr2 25439005 25439017 TFAP2B JASPAR yes 22019309
chr2 25439005 25439017 TFAP2C JASPAR yes 22019310
chr2 25439005 25439017 TFAP2A JASPAR yes 72456676
chr2 25439005 25439017 TFAP2B JASPAR yes 72456677
chr2 25439005 25439017 TFAP2C JASPAR yes 72456678
chr2 25439007 25439016 TFAP2A JASPAR yes 22019311
chr2 25439007 25439016 TFAP2A JASPAR yes 72456679
chr2 25439012 25439016 LFA1 TRANSFAC yes 22019312
chr2 25439012 25439016 LFA1 TRANSFAC yes 72456680
chr2 25439012 25439024 NHLH1 JASPAR yes 22019313
chr2 25439012 25439024 NHLH1 JASPAR yes 72456681
chr2 25439013 25439023 NHLH1 JASPAR yes 22019314
chr2 25439013 25439023 NHLH1 JASPAR yes 72456682
chr2 25439019 25439024 TFAP2A TRANSFAC yes 22019315
chr2 25439019 25439024 TFAP2A TRANSFAC yes 72456683
chr2 25439019 25439025 MZF1 JASPAR yes 22019316
chr2 25439019 25439025 MZF1 JASPAR yes 72456684
chr2 25439022 25439028 PEA3 TRANSFAC yes 22019317
chr2 25439022 25439028 PEA3 TRANSFAC yes 72456685
chr2 25439048 25439053 SP1 TRANSFAC yes 22019318
chr2 25439048 25439053 SP1 TRANSFAC yes 72456686
chr2 25439060 25439065 ETS2 TRANSFAC yes 22019319
chr2 25439060 25439065 ETS2 TRANSFAC yes 72456687
chr2 25439065 25439069 LFA1 TRANSFAC yes 22019320
chr2 25439065 25439069 LFA1 TRANSFAC yes 72456688
chr2 25439075 25439086 NRF1 JASPAR yes 22019321
chr2 25439075 25439086 NRF1 JASPAR yes 72456689
chr2 25439086 25439096 SP1 JASPAR yes 22019322
chr2 25439086 25439096 SP1 JASPAR yes 72456690
chr2 25439087 25439095 SP1 TRANSFAC yes 22019323
chr2 25439087 25439095 SP1 TRANSFAC yes 72456691
chr2 25439087 25439096 SP1 TRANSFAC yes 22019324
chr2 25439087 25439096 SP1 TRANSFAC yes 72456692
chr2 25439088 25439093 SP1 TRANSFAC yes 22019325
chr2 25439088 25439093 SP1 TRANSFAC yes 72456693
chr2 25439089 25439094 SP1 TRANSFAC yes 22019326
chr2 25439089 25439094 SP1 TRANSFAC yes 72456694
chr2 25439089 25439095 SP1 TRANSFAC yes 22019327
chr2 25439089 25439095 SP1 TRANSFAC yes 72456695
chr2 25439108 25439123 TFAP2A JASPAR yes 22019328
chr2 25439108 25439123 TFAP2C JASPAR yes 22019329
chr2 25439108 25439123 TFAP2A JASPAR yes 72456696
chr2 25439108 25439123 TFAP2C JASPAR yes 72456697
chr2 25439109 25439128 REST JASPAR yes 22019330
chr2 25439109 25439128 REST JASPAR yes 72456698
chr2 25439110 25439125 TFAP2A JASPAR yes 22019331
chr2 25439110 25439125 TFAP2A JASPAR yes 72456699
chr2 25439111 25439122 TFAP2A JASPAR yes 22019332
chr2 25439111 25439122 TFAP2A JASPAR yes 72456700
chr2 25439112 25439121 TFAP2A JASPAR yes 22019333
chr2 25439112 25439121 TFAP2A JASPAR yes 72456701
SNP sites on vista30716[chr2:25438901-25439135]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 25438946 rs566224915 C T
CREB3 CREB3L1 GABPA POLR2A REST RUNX3
5592413
chr2 25438963 rs527882868 G C
GABPA POLR2A RUNX3 SP1
5592414
chr2 25438995 rs549513679 A G
AR ELF1 GABPA PLAG1 POLR2A RUNX3
5592415
chr2 25438996 rs567880690 C T
AR ELF1 GABPA PLAG1 POLR2A RUNX3
5592416
chr2 25439020 rs571704982 T C
GABPA MZF1 NHLH1 POLR2A RUNX3 TFAP2A
5592417
chr2 25439101 rs10185041 T G
GABPA POLR2A RUNX3
5592418
Genes possibly regulated by vista30716[chr2:25438901-25439135]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 25383722 25391772 - POMC ENSG00000115138.6 25391772 0.68 1.0 2179 52871
Expression level of Genes
Back to top
miRNAs possibly regulated by vista30716[chr2:25438901-25439135]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results