EnhancerDB
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  3. vista3072[chr1:117112460-117112738]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3072[chr1:117112460-117112738]
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Tissue distribution of vista3072
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Transcription factor that possibly regulate vista3072[chr1:117112460-117112738]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117110307 117114109 POLR2A UCSC Txn Factor no Conserved 107824682
chr1 117110307 117114109 POLR2A UCSC Txn Factor no Conserved 107824683
chr1 117110307 117114109 POLR2A UCSC Txn Factor no Conserved 107824684
chr1 117112335 117112831 TCF7L2 UCSC Txn Factor no Conserved 107824720
chr1 117112419 117113303 MYC UCSC Txn Factor no Conserved 107824731
chr1 117112552 117113233 E2F6 UCSC Txn Factor no Conserved 107824744
chr1 117112722 117113354 E2F1 UCSC Txn Factor no Conserved 107824747
chr1 117112462 117112468 ZNF354C JASPAR yes 118357505
chr1 117112463 117112473 ID4 JASPAR yes 118357506
chr1 117112464 117112473 SNAI2 JASPAR yes 118357507
chr1 117112465 117112470 USF2 TRANSFAC yes 118357508
chr1 117112494 117112502 MEIS2 JASPAR yes 118357509
chr1 117112494 117112502 MEIS3 JASPAR yes 118357510
chr1 117112495 117112507 PKNOX1 JASPAR yes 118357511
chr1 117112495 117112507 PKNOX2 JASPAR yes 118357512
chr1 117112495 117112507 TGIF1 JASPAR yes 118357513
chr1 117112495 117112507 TGIF2 JASPAR yes 118357514
chr1 117112496 117112505 SNAI2 JASPAR yes 118357515
chr1 117112496 117112506 FIGLA JASPAR yes 118357516
chr1 117112496 117112506 ID4 JASPAR yes 118357517
chr1 117112496 117112506 TCF3 JASPAR yes 118357518
chr1 117112496 117112506 TCF4 JASPAR yes 118357519
chr1 117112499 117112512 SMAD2 JASPAR yes 118357520
chr1 117112510 117112520 SP1 JASPAR yes 118357521
chr1 117112513 117112518 SP1 TRANSFAC yes 118357522
chr1 117112553 117112563 GCM2 JASPAR yes 118357523
chr1 117112553 117112564 GCM1 JASPAR yes 118357524
chr1 117112570 117112591 ZNF263 JASPAR yes 118357525
chr1 117112572 117112576 NFE TRANSFAC yes 118357526
chr1 117112572 117112577 GATA1 TRANSFAC yes 118357527
chr1 117112572 117112578 GATA3 JASPAR yes 118357528
chr1 117112578 117112593 NR2C2 JASPAR yes 118357529
chr1 117112581 117112587 SP1 TRANSFAC yes 118357530
chr1 117112581 117112591 SP1 JASPAR yes 118357531
chr1 117112591 117112605 TLX1 JASPAR yes 118357532
chr1 117112595 117112599 NFE TRANSFAC yes 118357533
chr1 117112609 117112620 NRF1 JASPAR yes 118357534
chr1 117112610 117112621 NRF1 JASPAR yes 118357535
chr1 117112627 117112631 LFA1 TRANSFAC yes 118357536
chr1 117112634 117112646 HINFP JASPAR yes 118357537
chr1 117112687 117112700 SMAD2 JASPAR yes 118357538
chr1 117112716 117112721 MYC TRANSFAC yes 118357539
SNP sites on vista3072[chr1:117112460-117112738]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117112559 rs17035998 G A
E2F6 GCM1 GCM2 MYC POLR2A TCF7L2
589785
chr1 117112704 rs3176855 A G
E2F6 MYC POLR2A TCF7L2
589786
Genes possibly regulated by vista3072[chr1:117112460-117112738]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117057157 117113661 - CD58 ENSG00000116815.11 117113661 0.93 0.99 1061 99077
chr1 117117031 117210375 - IGSF3 ENSG00000143061.13 117210375 0.85 1.0 1062 2363
Expression level of Genes
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miRNAs possibly regulated by vista3072[chr1:117112460-117112738]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results