EnhancerDB
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  3. vista30720[chr2:25496302-25496542]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30720[chr2:25496302-25496542]
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Tissue distribution of vista30720
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Transcription factor that possibly regulate vista30720[chr2:25496302-25496542]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 25496249 25496525 USF2 UCSC Txn Factor no Conserved 108431368
chr2 25496301 25496307 SOX10 JASPAR yes 22019491
chr2 25496301 25496307 SOX10 JASPAR yes 72460229
chr2 25496326 25496345 CTCF JASPAR yes 22019492
chr2 25496326 25496345 CTCF JASPAR yes 72460230
chr2 25496331 25496344 TFAP2A JASPAR yes 22019493
chr2 25496331 25496344 TFAP2B JASPAR yes 22019494
chr2 25496331 25496344 TFAP2C JASPAR yes 22019495
chr2 25496331 25496344 TFAP2A JASPAR yes 72460231
chr2 25496331 25496344 TFAP2B JASPAR yes 72460232
chr2 25496331 25496344 TFAP2C JASPAR yes 72460233
chr2 25496331 25496346 TFAP2C JASPAR yes 22019496
chr2 25496331 25496346 TFAP2C JASPAR yes 72460234
chr2 25496332 25496343 EBF1 JASPAR yes 22019497
chr2 25496332 25496343 EBF1 JASPAR yes 72460235
chr2 25496339 25496354 TFAP2C JASPAR yes 22019498
chr2 25496339 25496354 TFAP2C JASPAR yes 72460236
chr2 25496340 25496352 INSM1 JASPAR yes 22019499
chr2 25496340 25496352 INSM1 JASPAR yes 72460237
chr2 25496361 25496375 NR2F1 JASPAR yes 22019500
chr2 25496361 25496375 NR2F1 JASPAR yes 72460238
chr2 25496371 25496381 BHLHE40 JASPAR yes 22019501
chr2 25496371 25496381 MLXIPL JASPAR yes 22019502
chr2 25496371 25496381 MLX JASPAR yes 22019503
chr2 25496371 25496381 BHLHE40 JASPAR yes 72460239
chr2 25496371 25496381 MLXIPL JASPAR yes 72460240
chr2 25496371 25496381 MLX JASPAR yes 72460241
chr2 25496373 25496378 MYC TRANSFAC yes 22019504
chr2 25496373 25496378 USF1 TRANSFAC yes 22019505
chr2 25496373 25496378 USF2 TRANSFAC yes 22019506
chr2 25496373 25496378 MYC TRANSFAC yes 72460242
chr2 25496373 25496378 USF1 TRANSFAC yes 72460243
chr2 25496373 25496378 USF2 TRANSFAC yes 72460244
chr2 25496376 25496385 NKX2-8 JASPAR yes 22019507
chr2 25496376 25496385 NKX2-8 JASPAR yes 72460245
chr2 25496382 25496396 GLIS2 JASPAR yes 22019508
chr2 25496382 25496396 ZIC1 JASPAR yes 22019509
chr2 25496382 25496396 GLIS2 JASPAR yes 72460246
chr2 25496382 25496396 ZIC1 JASPAR yes 72460247
chr2 25496382 25496397 ZIC4 JASPAR yes 22019510
chr2 25496382 25496397 ZIC4 JASPAR yes 72460248
chr2 25496385 25496395 MAX JASPAR yes 22019511
chr2 25496385 25496395 MNT JASPAR yes 22019512
chr2 25496385 25496395 MAX JASPAR yes 72460249
chr2 25496385 25496395 MNT JASPAR yes 72460250
chr2 25496386 25496393 USF1 JASPAR yes 22019513
chr2 25496386 25496393 USF1 JASPAR yes 72460251
chr2 25496386 25496396 MAX JASPAR yes 22019514
chr2 25496386 25496396 MAX JASPAR yes 72460252
chr2 25496387 25496392 MYC TRANSFAC yes 22019515
chr2 25496387 25496392 USF1 TRANSFAC yes 22019516
chr2 25496387 25496392 USF2 TRANSFAC yes 22019517
chr2 25496387 25496392 MYC TRANSFAC yes 72460253
chr2 25496387 25496392 USF1 TRANSFAC yes 72460254
chr2 25496387 25496392 USF2 TRANSFAC yes 72460255
chr2 25496387 25496394 USF1 JASPAR yes 22019518
chr2 25496387 25496394 USF1 JASPAR yes 72460256
chr2 25496396 25496411 STAT2 JASPAR yes 22019519
chr2 25496396 25496411 STAT2 JASPAR yes 72460257
chr2 25496397 25496411 STAT1 JASPAR yes 22019520
chr2 25496397 25496411 STAT1 JASPAR yes 72460258
chr2 25496401 25496408 SPIB JASPAR yes 22019521
chr2 25496401 25496408 SPIB JASPAR yes 72460259
chr2 25496404 25496419 FOXP1 JASPAR yes 22019522
chr2 25496404 25496419 FOXP1 JASPAR yes 72460260
chr2 25496420 25496431 NFE2L2 JASPAR yes 22019523
chr2 25496420 25496431 NFE2L2 JASPAR yes 72460261
chr2 25496425 25496429 ESR1 TRANSFAC yes 22019524
chr2 25496425 25496429 ESR1 TRANSFAC yes 72460262
chr2 25496442 25496448 LEF1 TRANSFAC yes 22019525
chr2 25496442 25496448 SOX10 JASPAR yes 22019526
chr2 25496442 25496448 LEF1 TRANSFAC yes 72460263
chr2 25496442 25496448 SOX10 JASPAR yes 72460264
chr2 25496506 25496511 H4TF1 TRANSFAC yes 22019527
chr2 25496506 25496511 H4TF1 TRANSFAC yes 72460265
chr2 25496507 25496518 E2F6 JASPAR yes 22019528
chr2 25496507 25496518 E2F6 JASPAR yes 72460266
chr2 25496528 25496540 YY1 JASPAR yes 22019529
chr2 25496528 25496540 YY1 JASPAR yes 72460267
chr2 25496533 25496537 YY1 TRANSFAC yes 22019530
chr2 25496533 25496537 YY1 TRANSFAC yes 72460268
chr2 25496534 25496547 EOMES JASPAR yes 22019531
chr2 25496534 25496547 EOMES JASPAR yes 72460269
chr2 25496536 25496546 TBR1 JASPAR yes 22019532
chr2 25496536 25496546 TBR1 JASPAR yes 72460270
chr2 25496536 25496547 TBX20 JASPAR yes 22019533
chr2 25496536 25496547 TBX2 JASPAR yes 22019534
chr2 25496536 25496547 TBX20 JASPAR yes 72460271
chr2 25496536 25496547 TBX2 JASPAR yes 72460272
chr2 25496537 25496547 TBX21 JASPAR yes 22019535
chr2 25496537 25496547 TBX21 JASPAR yes 72460273
SNP sites on vista30720[chr2:25496302-25496542]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 25496307 rs116130577 G A
SOX10 USF2
5592720
chr2 25496351 rs183248211 A G
INSM1 TFAP2C USF2
5592721
chr2 25496493 rs60464974 G A
USF2
5592722
chr2 25496501 rs146269901 C T
USF2
5592723
Genes possibly regulated by vista30720[chr2:25496302-25496542]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 25455845 25565459 - DNMT3A ENSG00000119772.12 25565459 0.83 0.99 2180 31083
Expression level of Genes
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miRNAs possibly regulated by vista30720[chr2:25496302-25496542]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results