EnhancerDB
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  3. vista30722[chr2:25502146-25502454]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30722[chr2:25502146-25502454]
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Tissue distribution of vista30722
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Transcription factor that possibly regulate vista30722[chr2:25502146-25502454]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 25501880 25502669 IKZF1 UCSC Txn Factor no Conserved 108431372
chr2 25502082 25502420 RUNX3 UCSC Txn Factor no Conserved 108431373
chr2 25502084 25502385 SPI1 UCSC Txn Factor no Conserved 108431374
chr2 25502161 25502359 IRF4 UCSC Txn Factor no Conserved 108431375
chr2 25502171 25502481 BHLHE40 UCSC Txn Factor no Conserved 108431376
chr2 25502182 25502458 USF2 UCSC Txn Factor no Conserved 108431377
chr2 25502182 25502462 PAX5 UCSC Txn Factor no Conserved 108431378
chr2 25502178 25502184 TCF4 TRANSFAC yes 22019730
chr2 25502178 25502184 TCF4 TRANSFAC yes 72460973
chr2 25502184 25502201 BCL6B JASPAR yes 22019731
chr2 25502184 25502201 BCL6B JASPAR yes 72460974
chr2 25502194 25502214 TP53 JASPAR yes 22019732
chr2 25502194 25502214 TP53 JASPAR yes 72460975
chr2 25502195 25502206 NFKB1 JASPAR yes 22019733
chr2 25502195 25502206 NFKB1 JASPAR yes 72460976
chr2 25502221 25502235 SPI1 JASPAR yes 22019734
chr2 25502221 25502235 SPI1 JASPAR yes 72460977
chr2 25502223 25502244 IRF1 JASPAR yes 22019735
chr2 25502223 25502244 IRF1 JASPAR yes 72460978
chr2 25502227 25502242 STAT2 JASPAR yes 22019736
chr2 25502227 25502242 STAT2 JASPAR yes 72460979
chr2 25502227 25502245 IRF2 JASPAR yes 22019737
chr2 25502227 25502245 IRF2 JASPAR yes 72460980
chr2 25502228 25502240 IRF1 JASPAR yes 22019738
chr2 25502228 25502240 IRF1 JASPAR yes 72460981
chr2 25502267 25502272 SP1 TRANSFAC yes 22019739
chr2 25502267 25502272 SP1 TRANSFAC yes 72460982
chr2 25502279 25502293 SPIC JASPAR yes 22019740
chr2 25502279 25502293 SPIC JASPAR yes 72460983
chr2 25502280 25502288 EHF JASPAR yes 22019741
chr2 25502280 25502288 EHF JASPAR yes 72460984
chr2 25502291 25502297 JUN TRANSFAC yes 22019742
chr2 25502291 25502297 JUN TRANSFAC yes 72460985
chr2 25502297 25502309 NHLH1 JASPAR yes 22019743
chr2 25502297 25502309 NHLH1 JASPAR yes 72460986
chr2 25502298 25502308 TFAP4 JASPAR yes 22019744
chr2 25502298 25502308 TFAP4 JASPAR yes 72460987
chr2 25502306 25502316 CLOCK JASPAR yes 22019745
chr2 25502306 25502316 CLOCK JASPAR yes 72460988
chr2 25502307 25502317 MAX JASPAR yes 22019746
chr2 25502307 25502317 MAX JASPAR yes 72460989
chr2 25502319 25502331 PKNOX2 JASPAR yes 22019747
chr2 25502319 25502331 PKNOX2 JASPAR yes 72460990
chr2 25502320 25502330 TFAP4 JASPAR yes 22019748
chr2 25502320 25502330 TFAP4 JASPAR yes 72460991
chr2 25502371 25502375 NFE TRANSFAC yes 22019749
chr2 25502371 25502375 NFE TRANSFAC yes 72460992
chr2 25502385 25502391 NFIC JASPAR yes 22019750
chr2 25502385 25502391 NFIC JASPAR yes 72460993
chr2 25502420 25502423 MYB TRANSFAC yes 22019751
chr2 25502420 25502423 MYB TRANSFAC yes 72460994
chr2 25502430 25502434 H1TF2 TRANSFAC yes 22019752
chr2 25502430 25502434 NFE TRANSFAC yes 22019753
chr2 25502430 25502434 SRF TRANSFAC yes 22019754
chr2 25502430 25502434 H1TF2 TRANSFAC yes 72460995
chr2 25502430 25502434 NFE TRANSFAC yes 72460996
chr2 25502430 25502434 SRF TRANSFAC yes 72460997
chr2 25502438 25502453 STAT1 JASPAR yes 22019755
chr2 25502438 25502453 STAT1 JASPAR yes 72460998
chr2 25502440 25502451 STAT3 JASPAR yes 22019756
chr2 25502440 25502451 STAT3 JASPAR yes 72460999
SNP sites on vista30722[chr2:25502146-25502454]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 25502378 rs549971689 G A
BHLHE40 IKZF1 PAX5 RUNX3 SPI1 USF2
5592788
chr2 25502395 rs78558145 C T
BHLHE40 IKZF1 PAX5 RUNX3 USF2
5592789
Genes possibly regulated by vista30722[chr2:25502146-25502454]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 25455845 25565459 - DNMT3A ENSG00000119772.12 25565459 0.83 0.99 2180 36995
Expression level of Genes
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miRNAs possibly regulated by vista30722[chr2:25502146-25502454]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results