EnhancerDB
  1. Home
  2. Enhancers
  3. vista30728[chr2:25545894-25546051]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30728[chr2:25545894-25546051]
Back to top
Tissue distribution of vista30728
Back to top
Transcription factor that possibly regulate vista30728[chr2:25545894-25546051]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 25545843 25546113 USF2 UCSC Txn Factor no Conserved 108431391
chr2 25545858 25546114 USF1 UCSC Txn Factor no Conserved 108431392
chr2 25545890 25545900 MZF1 JASPAR yes 22020027
chr2 25545890 25545900 MZF1 JASPAR yes 72466270
chr2 25545893 25545899 SP1 TRANSFAC yes 22020028
chr2 25545893 25545899 SP1 TRANSFAC yes 72466271
chr2 25545893 25545903 SP1 JASPAR yes 22020029
chr2 25545893 25545903 SP1 JASPAR yes 72466272
chr2 25545905 25545910 SP1 TRANSFAC yes 22020030
chr2 25545905 25545910 SP1 TRANSFAC yes 72466273
chr2 25545935 25545952 RARA JASPAR yes 22020031
chr2 25545935 25545952 RARA JASPAR yes 72466274
chr2 25545946 25545954 CREB1 JASPAR yes 22020032
chr2 25545946 25545954 CREB1 JASPAR yes 72466275
chr2 25545946 25545960 NR2F1 JASPAR yes 22020033
chr2 25545946 25545960 NR2F1 JASPAR yes 72466276
chr2 25545946 25545961 NR2C2 JASPAR yes 22020034
chr2 25545946 25545961 NR2C2 JASPAR yes 72466277
chr2 25545951 25545965 RXRB JASPAR yes 22020035
chr2 25545951 25545965 RXRG JASPAR yes 22020036
chr2 25545951 25545965 RXRB JASPAR yes 72466278
chr2 25545951 25545965 RXRG JASPAR yes 72466279
chr2 25545951 25545966 NR2C2 JASPAR yes 22020037
chr2 25545951 25545966 NR2C2 JASPAR yes 72466280
chr2 25545956 25545971 TFAP2C JASPAR yes 22020038
chr2 25545956 25545971 TFAP2C JASPAR yes 72466281
chr2 25545957 25545967 SREBF1 JASPAR yes 22020039
chr2 25545957 25545967 SREBF2 JASPAR yes 22020040
chr2 25545957 25545967 SREBF1 JASPAR yes 72466282
chr2 25545957 25545967 SREBF2 JASPAR yes 72466283
chr2 25545976 25545986 MAX JASPAR yes 22020041
chr2 25545976 25545986 MAX JASPAR yes 72466284
chr2 25545976 25545987 USF2 JASPAR yes 22020042
chr2 25545976 25545987 USF2 JASPAR yes 72466285
chr2 25545977 25545987 BHLHE40 JASPAR yes 22020043
chr2 25545977 25545987 BHLHE41 JASPAR yes 22020044
chr2 25545977 25545987 HEY1 JASPAR yes 22020045
chr2 25545977 25545987 HEY2 JASPAR yes 22020046
chr2 25545977 25545987 MAX JASPAR yes 22020047
chr2 25545977 25545987 MLXIPL JASPAR yes 22020048
chr2 25545977 25545987 MLX JASPAR yes 22020049
chr2 25545977 25545987 MNT JASPAR yes 22020050
chr2 25545977 25545987 SREBF2 JASPAR yes 22020051
chr2 25545977 25545987 TFE3 JASPAR yes 22020052
chr2 25545977 25545987 TFEB JASPAR yes 22020053
chr2 25545977 25545987 TFEC JASPAR yes 22020054
chr2 25545977 25545987 BHLHE40 JASPAR yes 72466286
chr2 25545977 25545987 BHLHE41 JASPAR yes 72466287
chr2 25545977 25545987 HEY1 JASPAR yes 72466288
chr2 25545977 25545987 HEY2 JASPAR yes 72466289
chr2 25545977 25545987 MAX JASPAR yes 72466290
chr2 25545977 25545987 MLXIPL JASPAR yes 72466291
chr2 25545977 25545987 MLX JASPAR yes 72466292
chr2 25545977 25545987 MNT JASPAR yes 72466293
chr2 25545977 25545987 SREBF2 JASPAR yes 72466294
chr2 25545977 25545987 TFE3 JASPAR yes 72466295
chr2 25545977 25545987 TFEB JASPAR yes 72466296
chr2 25545977 25545987 TFEC JASPAR yes 72466297
chr2 25545977 25545988 USF1 JASPAR yes 22020055
chr2 25545977 25545988 USF2 JASPAR yes 22020056
chr2 25545977 25545988 USF1 JASPAR yes 72466298
chr2 25545977 25545988 USF2 JASPAR yes 72466299
chr2 25545978 25545988 MAX JASPAR yes 22020057
chr2 25545978 25545988 MAX JASPAR yes 72466300
chr2 25545979 25545984 MYC TRANSFAC yes 22020058
chr2 25545979 25545984 USF1 TRANSFAC yes 22020059
chr2 25545979 25545984 USF2 TRANSFAC yes 22020060
chr2 25545979 25545984 MYC TRANSFAC yes 72466301
chr2 25545979 25545984 USF1 TRANSFAC yes 72466302
chr2 25545979 25545984 USF2 TRANSFAC yes 72466303
chr2 25545982 25545993 NFE2L2 JASPAR yes 22020061
chr2 25545982 25545993 NFE2L2 JASPAR yes 72466304
chr2 25545989 25546004 NFYB JASPAR yes 22020062
chr2 25545989 25546004 NFYB JASPAR yes 72466305
chr2 25545991 25546004 DUXA JASPAR yes 22020063
chr2 25545991 25546004 DUXA JASPAR yes 72466306
chr2 25545991 25546007 NFYA JASPAR yes 22020064
chr2 25545991 25546007 NFYA JASPAR yes 72466307
chr2 25545992 25546010 NFYA JASPAR yes 22020065
chr2 25545992 25546010 NFYA JASPAR yes 72466308
chr2 25545996 25546000 H1TF2 TRANSFAC yes 22020066
chr2 25545996 25546000 NFE TRANSFAC yes 22020067
chr2 25545996 25546000 SRF TRANSFAC yes 22020068
chr2 25545996 25546000 H1TF2 TRANSFAC yes 72466309
chr2 25545996 25546000 NFE TRANSFAC yes 72466310
chr2 25545996 25546000 SRF TRANSFAC yes 72466311
chr2 25546023 25546033 CUX1 JASPAR yes 22020069
chr2 25546023 25546033 CUX1 JASPAR yes 72466312
chr2 25546046 25546049 MYB TRANSFAC yes 22020070
chr2 25546046 25546049 MYB TRANSFAC yes 72466313
SNP sites on vista30728[chr2:25545894-25546051]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 25546021 rs538569830 T C
USF1 USF2
5593217
chr2 25546025 rs182835778 T C
CUX1 USF1 USF2
5593218
Genes possibly regulated by vista30728[chr2:25545894-25546051]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 25455845 25565459 - DNMT3A ENSG00000119772.12 25565459 0.83 0.99 2180 80592
Expression level of Genes
Back to top
miRNAs possibly regulated by vista30728[chr2:25545894-25546051]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results