EnhancerDB
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  3. vista3073[chr1:117129425-117129671]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3073[chr1:117129425-117129671]
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Tissue distribution of vista3073
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Transcription factor that possibly regulate vista3073[chr1:117129425-117129671]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117129343 117129659 EBF1 UCSC Txn Factor no Conserved 107824762
chr1 117129425 117129433 FOXO3 JASPAR yes 118357540
chr1 117129433 117129454 IRF1 JASPAR yes 118357541
chr1 117129437 117129451 SPI1 JASPAR yes 118357542
chr1 117129437 117129452 STAT2 JASPAR yes 118357543
chr1 117129439 117129460 IRF1 JASPAR yes 118357544
chr1 117129461 117129466 SP1 TRANSFAC yes 118357545
chr1 117129473 117129489 SOX8 JASPAR yes 118357546
chr1 117129490 117129505 TFAP2A JASPAR yes 118357547
chr1 117129490 117129505 TFAP2C JASPAR yes 118357548
chr1 117129492 117129506 EBF1 JASPAR yes 118357549
chr1 117129493 117129504 EBF1 JASPAR yes 118357550
chr1 117129493 117129504 TFAP2A JASPAR yes 118357551
chr1 117129493 117129504 TFAP2B JASPAR yes 118357552
chr1 117129493 117129504 TFAP2C JASPAR yes 118357553
chr1 117129494 117129503 TFAP2A JASPAR yes 118357554
chr1 117129505 117129520 TFAP2C JASPAR yes 118357555
chr1 117129518 117129530 BHLHE23 JASPAR yes 118357556
chr1 117129518 117129530 PKNOX1 JASPAR yes 118357557
chr1 117129518 117129530 PKNOX2 JASPAR yes 118357558
chr1 117129518 117129530 TGIF1 JASPAR yes 118357559
chr1 117129518 117129530 TGIF2 JASPAR yes 118357560
chr1 117129519 117129529 BHLHE22 JASPAR yes 118357561
chr1 117129519 117129529 NEUROD2 JASPAR yes 118357562
chr1 117129519 117129529 NEUROG2 JASPAR yes 118357563
chr1 117129519 117129529 OLIG1 JASPAR yes 118357564
chr1 117129519 117129529 OLIG2 JASPAR yes 118357565
chr1 117129519 117129529 OLIG3 JASPAR yes 118357566
chr1 117129537 117129543 NFIC JASPAR yes 118357567
chr1 117129539 117129543 H1TF2 TRANSFAC yes 118357568
chr1 117129539 117129543 NFE TRANSFAC yes 118357569
chr1 117129539 117129543 SRF TRANSFAC yes 118357570
chr1 117129562 117129573 FLI1 JASPAR yes 118357571
chr1 117129563 117129573 GABPA JASPAR yes 118357572
chr1 117129563 117129574 ELF5 JASPAR yes 118357573
chr1 117129563 117129574 ETV2 JASPAR yes 118357574
chr1 117129563 117129576 ELF1 JASPAR yes 118357575
chr1 117129563 117129577 SPI1 JASPAR yes 118357576
chr1 117129563 117129577 SPIC JASPAR yes 118357577
chr1 117129566 117129578 HNF1B JASPAR yes 118357578
chr1 117129578 117129597 CTCF JASPAR yes 118357579
chr1 117129599 117129618 CTCF JASPAR yes 118357580
chr1 117129635 117129639 TEAD2 TRANSFAC yes 118357581
chr1 117129638 117129653 TFAP2C JASPAR yes 118357582
chr1 117129640 117129643 MYB TRANSFAC yes 118357583
SNP sites on vista3073[chr1:117129425-117129671]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117129470 rs148583014 T C
EBF1
589858
chr1 117129571 rs554525467 TG T
EBF1 ELF1 ELF5 ETV2 FLI1 GABPA HNF1B SPI1 SPIC
589859
chr1 117129590 rs535224772 G C
CTCF EBF1
589860
Genes possibly regulated by vista3073[chr1:117129425-117129671]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117057157 117113661 - CD58 ENSG00000116815.11 117113661 0.93 0.99 1061 84236
chr1 117117031 117210375 - IGSF3 ENSG00000143061.13 117210375 0.85 1.0 1062 19296
Expression level of Genes
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miRNAs possibly regulated by vista3073[chr1:117129425-117129671]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results