EnhancerDB
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  3. vista30730[chr2:25646148-25646487]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30730[chr2:25646148-25646487]
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Tissue distribution of vista30730
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Transcription factor that possibly regulate vista30730[chr2:25646148-25646487]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 25646144 25646154 NFIA JASPAR yes 22020110
chr2 25646144 25646154 NFIA JASPAR yes 72475610
chr2 25646146 25646152 NFIC JASPAR yes 22020111
chr2 25646146 25646152 NFIC JASPAR yes 72475611
chr2 25646148 25646164 POU4F2 JASPAR yes 22020112
chr2 25646148 25646164 POU4F2 JASPAR yes 72475612
chr2 25646153 25646156 MYB TRANSFAC yes 22020113
chr2 25646153 25646156 MYB TRANSFAC yes 72475613
chr2 25646185 25646191 TCF4 TRANSFAC yes 22020114
chr2 25646185 25646191 TCF4 TRANSFAC yes 72475614
chr2 25646204 25646214 PAX3 JASPAR yes 22020115
chr2 25646204 25646214 PAX7 JASPAR yes 22020116
chr2 25646204 25646214 PAX3 JASPAR yes 72475615
chr2 25646204 25646214 PAX7 JASPAR yes 72475616
chr2 25646214 25646217 MYB TRANSFAC yes 22020117
chr2 25646214 25646217 MYB TRANSFAC yes 72475617
chr2 25646224 25646242 SRF JASPAR yes 22020118
chr2 25646224 25646242 SRF JASPAR yes 72475618
chr2 25646226 25646237 STAT3 JASPAR yes 22020119
chr2 25646226 25646237 STAT3 JASPAR yes 72475619
chr2 25646235 25646245 GSC2 JASPAR yes 22020120
chr2 25646235 25646245 GSC JASPAR yes 22020121
chr2 25646235 25646245 GSC2 JASPAR yes 72475620
chr2 25646235 25646245 GSC JASPAR yes 72475621
chr2 25646236 25646244 OTX1 JASPAR yes 22020122
chr2 25646236 25646244 OTX2 JASPAR yes 22020123
chr2 25646236 25646244 OTX1 JASPAR yes 72475622
chr2 25646236 25646244 OTX2 JASPAR yes 72475623
chr2 25646236 25646245 PITX3 JASPAR yes 22020124
chr2 25646236 25646245 PITX3 JASPAR yes 72475624
chr2 25646247 25646253 TCF4 TRANSFAC yes 22020125
chr2 25646247 25646253 TCF4 TRANSFAC yes 72475625
chr2 25646262 25646265 MYB TRANSFAC yes 22020126
chr2 25646262 25646265 MYB TRANSFAC yes 72475626
chr2 25646263 25646278 JUND JASPAR yes 22020127
chr2 25646263 25646278 JUND JASPAR yes 72475627
chr2 25646264 25646277 JUN JASPAR yes 22020128
chr2 25646264 25646277 JUN JASPAR yes 72475628
chr2 25646265 25646279 ATF7 JASPAR yes 22020129
chr2 25646265 25646279 ATF7 JASPAR yes 72475629
chr2 25646266 25646278 JDP2 JASPAR yes 22020130
chr2 25646266 25646278 JDP2 JASPAR yes 72475630
chr2 25646266 25646281 JUND JASPAR yes 22020131
chr2 25646266 25646281 JUND JASPAR yes 72475631
chr2 25646296 25646308 POU3F2 JASPAR yes 22020132
chr2 25646296 25646308 POU3F2 JASPAR yes 72475632
chr2 25646303 25646307 YY1 TRANSFAC yes 22020133
chr2 25646303 25646307 YY1 TRANSFAC yes 72475633
chr2 25646309 25646315 GATA3 JASPAR yes 22020134
chr2 25646309 25646315 GATA3 JASPAR yes 72475634
chr2 25646316 25646324 GATA3 JASPAR yes 22020135
chr2 25646316 25646324 GATA3 JASPAR yes 72475635
chr2 25646332 25646353 MAFG JASPAR yes 22020136
chr2 25646332 25646353 MAFG JASPAR yes 72475636
chr2 25646351 25646357 TCF4 TRANSFAC yes 22020137
chr2 25646351 25646357 TCF4 TRANSFAC yes 72475637
chr2 25646369 25646382 POU2F2 JASPAR yes 22020138
chr2 25646369 25646382 POU2F2 JASPAR yes 72475638
chr2 25646390 25646403 POU3F3 JASPAR yes 22020139
chr2 25646390 25646403 POU3F3 JASPAR yes 72475639
chr2 25646392 25646396 YY1 TRANSFAC yes 22020140
chr2 25646392 25646396 YY1 TRANSFAC yes 72475640
chr2 25646398 25646408 HOXC10 JASPAR yes 22020141
chr2 25646398 25646408 HOXC10 JASPAR yes 72475641
chr2 25646398 25646409 HOXC13 JASPAR yes 22020142
chr2 25646398 25646409 HOXD12 JASPAR yes 22020143
chr2 25646398 25646409 HOXC13 JASPAR yes 72475642
chr2 25646398 25646409 HOXD12 JASPAR yes 72475643
chr2 25646407 25646412 GATA1 TRANSFAC yes 22020144
chr2 25646407 25646412 GATA1 TRANSFAC yes 72475644
chr2 25646416 25646426 NEUROD2 JASPAR yes 22020145
chr2 25646416 25646426 NEUROD2 JASPAR yes 72475645
chr2 25646416 25646427 USF1 JASPAR yes 22020146
chr2 25646416 25646427 USF2 JASPAR yes 22020147
chr2 25646416 25646427 USF1 JASPAR yes 72475646
chr2 25646416 25646427 USF2 JASPAR yes 72475647
chr2 25646417 25646427 MAX JASPAR yes 22020148
chr2 25646417 25646427 MAX JASPAR yes 72475648
chr2 25646443 25646446 MYB TRANSFAC yes 22020149
chr2 25646443 25646446 MYB TRANSFAC yes 72475649
chr2 25646449 25646455 ETS1 JASPAR yes 22020150
chr2 25646449 25646455 SPI1 JASPAR yes 22020151
chr2 25646449 25646455 ETS1 JASPAR yes 72475650
chr2 25646449 25646455 SPI1 JASPAR yes 72475651
chr2 25646457 25646461 YY1 TRANSFAC yes 22020152
chr2 25646457 25646461 YY1 TRANSFAC yes 72475652
chr2 25646458 25646468 HOXA13 JASPAR yes 22020153
chr2 25646458 25646468 HOXB13 JASPAR yes 22020154
chr2 25646458 25646468 HOXC10 JASPAR yes 22020155
chr2 25646458 25646468 HOXD11 JASPAR yes 22020156
chr2 25646458 25646468 HOXD13 JASPAR yes 22020157
chr2 25646458 25646468 HOXA13 JASPAR yes 72475653
chr2 25646458 25646468 HOXB13 JASPAR yes 72475654
chr2 25646458 25646468 HOXC10 JASPAR yes 72475655
chr2 25646458 25646468 HOXD11 JASPAR yes 72475656
chr2 25646458 25646468 HOXD13 JASPAR yes 72475657
chr2 25646458 25646469 HOXC11 JASPAR yes 22020158
chr2 25646458 25646469 HOXC13 JASPAR yes 22020159
chr2 25646458 25646469 HOXC11 JASPAR yes 72475658
chr2 25646458 25646469 HOXC13 JASPAR yes 72475659
chr2 25646459 25646468 CDX1 JASPAR yes 22020160
chr2 25646459 25646468 CDX1 JASPAR yes 72475660
chr2 25646459 25646470 CDX2 JASPAR yes 22020161
chr2 25646459 25646470 CDX2 JASPAR yes 72475661
SNP sites on vista30730[chr2:25646148-25646487]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 25646321 rs13032262 A G
GATA3
5593914
Genes possibly regulated by vista30730[chr2:25646148-25646487]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 25455845 25565459 - DNMT3A ENSG00000119772.12 25565459 0.83 0.99 2180 19311
Expression level of Genes
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miRNAs possibly regulated by vista30730[chr2:25646148-25646487]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 25551558 25551576 - hsa-miR-1301-5p MIMAT0026639 25564793 0.0041014398147577935 0.851964 0.676023 945
Expression level of miRNAs
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