EnhancerDB
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  3. vista30739[chr2:26220678-26220902]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30739[chr2:26220678-26220902]
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Tissue distribution of vista30739
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Transcription factor that possibly regulate vista30739[chr2:26220678-26220902]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 26220525 26221044 EP300 UCSC Txn Factor no Conserved 108431401
chr2 26220568 26221024 JUND UCSC Txn Factor no Conserved 108431402
chr2 26220574 26221012 TCF12 UCSC Txn Factor no Conserved 108431403
chr2 26220602 26220992 FOSL2 UCSC Txn Factor no Conserved 108431404
chr2 26220624 26220934 NR3C1 UCSC Txn Factor no Conserved 108431405
chr2 26220642 26220926 FOS UCSC Txn Factor no Conserved 108431406
chr2 26220642 26220938 HNF4A UCSC Txn Factor no Conserved 108431407
chr2 26220662 26220986 CEBPB UCSC Txn Factor no Conserved 108431408
chr2 26220662 26221086 CTCF UCSC Txn Factor no Conserved 108431409
chr2 26220713 26220995 SMC3 UCSC Txn Factor no Conserved 108431410
chr2 26220738 26221020 RAD21 UCSC Txn Factor no Conserved 108431411
chr2 26220686 26220701 ESR2 JASPAR yes 22020439
chr2 26220686 26220701 ESR2 JASPAR yes 72514100
chr2 26220691 26220697 SOX10 JASPAR yes 22020440
chr2 26220691 26220697 SOX10 JASPAR yes 72514101
chr2 26220716 26220720 NFE TRANSFAC yes 22020441
chr2 26220716 26220720 NFE TRANSFAC yes 72514102
chr2 26220724 26220739 NR2C2 JASPAR yes 22020442
chr2 26220724 26220739 NR2C2 JASPAR yes 72514103
chr2 26220734 26220745 FOS JASPAR yes 22020443
chr2 26220734 26220745 FOSL1 JASPAR yes 22020444
chr2 26220734 26220745 JUND JASPAR yes 22020445
chr2 26220734 26220745 NFE2 JASPAR yes 22020446
chr2 26220734 26220745 FOS JASPAR yes 72514104
chr2 26220734 26220745 FOSL1 JASPAR yes 72514105
chr2 26220734 26220745 JUND JASPAR yes 72514106
chr2 26220734 26220745 NFE2 JASPAR yes 72514107
chr2 26220735 26220746 FOSL2 JASPAR yes 22020447
chr2 26220735 26220746 JUNB JASPAR yes 22020448
chr2 26220735 26220746 FOSL2 JASPAR yes 72514108
chr2 26220735 26220746 JUNB JASPAR yes 72514109
chr2 26220735 26220749 JUN JASPAR yes 22020449
chr2 26220735 26220749 JUN JASPAR yes 72514110
chr2 26220741 26220746 MYC TRANSFAC yes 22020450
chr2 26220741 26220746 MYC TRANSFAC yes 72514111
chr2 26220757 26220772 HNF4G JASPAR yes 22020451
chr2 26220757 26220772 HNF4G JASPAR yes 72514112
chr2 26220766 26220770 H4TF2 TRANSFAC yes 22020452
chr2 26220766 26220770 H4TF2 TRANSFAC yes 72514113
chr2 26220770 26220781 FOS JASPAR yes 22020453
chr2 26220770 26220781 FOSL1 JASPAR yes 22020454
chr2 26220770 26220781 JUND JASPAR yes 22020455
chr2 26220770 26220781 NFE2 JASPAR yes 22020456
chr2 26220770 26220781 FOS JASPAR yes 72514114
chr2 26220770 26220781 FOSL1 JASPAR yes 72514115
chr2 26220770 26220781 JUND JASPAR yes 72514116
chr2 26220770 26220781 NFE2 JASPAR yes 72514117
chr2 26220771 26220782 FOSL2 JASPAR yes 22020457
chr2 26220771 26220782 JUNB JASPAR yes 22020458
chr2 26220771 26220782 FOSL2 JASPAR yes 72514118
chr2 26220771 26220782 JUNB JASPAR yes 72514119
chr2 26220771 26220785 JUN JASPAR yes 22020459
chr2 26220771 26220785 JUN JASPAR yes 72514120
chr2 26220777 26220782 MYC TRANSFAC yes 22020460
chr2 26220777 26220782 MYC TRANSFAC yes 72514121
chr2 26220793 26220808 HNF4G JASPAR yes 22020461
chr2 26220793 26220808 HNF4G JASPAR yes 72514122
chr2 26220794 26220808 NR2F1 JASPAR yes 22020462
chr2 26220794 26220808 NR2F1 JASPAR yes 72514123
chr2 26220794 26220809 HNF4A JASPAR yes 22020463
chr2 26220794 26220809 HNF4A JASPAR yes 72514124
chr2 26220802 26220806 H4TF2 TRANSFAC yes 22020464
chr2 26220802 26220806 H4TF2 TRANSFAC yes 72514125
chr2 26220833 26220839 SP1 TRANSFAC yes 22020465
chr2 26220833 26220839 SP1 TRANSFAC yes 72514126
chr2 26220834 26220839 SP1 TRANSFAC yes 22020466
chr2 26220834 26220839 SP1 TRANSFAC yes 72514127
chr2 26220848 26220859 FOS JASPAR yes 22020467
chr2 26220848 26220859 JUND JASPAR yes 22020468
chr2 26220848 26220859 FOS JASPAR yes 72514128
chr2 26220848 26220859 JUND JASPAR yes 72514129
chr2 26220862 26220874 TEAD1 JASPAR yes 22020469
chr2 26220862 26220874 TEAD1 JASPAR yes 72514130
chr2 26220888 26220907 CTCF JASPAR yes 22020470
chr2 26220888 26220907 CTCF JASPAR yes 72514131
chr2 26220890 26220900 NKX2-3 JASPAR yes 22020471
chr2 26220890 26220900 NKX2-3 JASPAR yes 72514132
chr2 26220895 26220905 ZNF740 JASPAR yes 22020472
chr2 26220895 26220905 ZNF740 JASPAR yes 72514133
SNP sites on vista30739[chr2:26220678-26220902]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 26220679 rs11886829 T A
CEBPB CTCF EP300 FOS FOSL2 HNF4A JUND NR3C1 TCF12
5596803
chr2 26220703 rs115606489 C A
CEBPB CTCF EP300 FOS FOSL2 HNF4A JUND NR3C1 TCF12
5596804
chr2 26220708 rs55640503 C G
CEBPB CTCF EP300 FOS FOSL2 HNF4A JUND NR3C1 TCF12
5596805
chr2 26220710 rs80066203 C T
CEBPB CTCF EP300 FOS FOSL2 HNF4A JUND NR3C1 TCF12
5596806
chr2 26220732 rs553237016 TTCCCTGACTCACCGTCAATCAGCAGTCAGACCAAGG T
CEBPB CTCF EP300 FOS FOSL2 HNF4A JUND NR2C2 NR3C1 SMC3 TCF12
5596807
chr2 26220781 rs181859472 C T
CEBPB CTCF EP300 FOS FOSL1 FOSL2 HNF4A JUN JUNB JUND MYC NFE2 NR3C1 RAD21 SMC3 TCF12
5596808
chr2 26220838 rs148180884 C A,T
CEBPB CTCF EP300 FOS FOSL2 HNF4A JUND NR3C1 RAD21 SMC3 SP1 TCF12
5596809
chr2 26220859 rs76655888 A G
CEBPB CTCF EP300 FOS FOSL2 HNF4A JUND NR3C1 RAD21 SMC3 TCF12
5596810
Genes possibly regulated by vista30739[chr2:26220678-26220902]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 26149471 26205618 - KIF3C ENSG00000084731.9 26205618 0.72 0.99 2183 84940
chr2 26251074 26251481 - AC013449.1 ENSG00000268412.1 26251481 0.8 1.0 2184 69421
chr2 26256976 26360323 + RAB10 ENSG00000084733.6 26256976 0.68 0.99 2185 63926
Expression level of Genes
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miRNAs possibly regulated by vista30739[chr2:26220678-26220902]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results