EnhancerDB
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  3. vista30748[chr2:26258152-26258567]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30748[chr2:26258152-26258567]
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Tissue distribution of vista30748
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Transcription factor that possibly regulate vista30748[chr2:26258152-26258567]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 26258160 26258165 SP1 TRANSFAC yes 22020813
chr2 26258175 26258179 YY1 TRANSFAC yes 22020814
chr2 26258207 26258228 ZNF263 JASPAR yes 22020815
chr2 26258231 26258246 STAT2 JASPAR yes 22020816
chr2 26258238 26258242 NFE TRANSFAC yes 22020817
chr2 26258264 26258285 IRF1 JASPAR yes 22020818
chr2 26258279 26258283 YY1 TRANSFAC yes 22020819
chr2 26258280 26258290 HOXB13 JASPAR yes 22020820
chr2 26258284 26258288 YY1 TRANSFAC yes 22020821
chr2 26258297 26258301 YY1 TRANSFAC yes 22020822
chr2 26258297 26258312 STAT1 JASPAR yes 22020823
chr2 26258299 26258310 STAT1 JASPAR yes 22020824
chr2 26258311 26258315 YY1 TRANSFAC yes 22020825
chr2 26258339 26258343 TEAD2 TRANSFAC yes 22020826
chr2 26258345 26258360 PRDM1 JASPAR yes 22020827
chr2 26258367 26258374 NKX3-1 JASPAR yes 22020828
chr2 26258395 26258406 ESRRA JASPAR yes 22020829
chr2 26258396 26258404 NR4A2 JASPAR yes 22020830
chr2 26258397 26258407 RORA JASPAR yes 22020831
chr2 26258406 26258417 PHOX2A JASPAR yes 22020832
chr2 26258406 26258417 PROP1 JASPAR yes 22020833
chr2 26258413 26258421 FEV JASPAR yes 22020834
chr2 26258421 26258442 IRF1 JASPAR yes 22020835
chr2 26258425 26258440 PRDM1 JASPAR yes 22020836
chr2 26258428 26258433 ETS2 TRANSFAC yes 22020837
chr2 26258436 26258441 ETS2 TRANSFAC yes 22020838
chr2 26258437 26258452 HSF1 JASPAR yes 22020839
chr2 26258442 26258453 STAT1 JASPAR yes 22020840
chr2 26258447 26258458 NFKB1 JASPAR yes 22020841
chr2 26258448 26258458 NFKB1 JASPAR yes 22020842
chr2 26258448 26258458 RELA JASPAR yes 22020843
chr2 26258448 26258458 REL JASPAR yes 22020844
chr2 26258478 26258487 NKX2-8 JASPAR yes 22020845
chr2 26258478 26258488 NKX2-3 JASPAR yes 22020846
chr2 26258479 26258487 ISL2 JASPAR yes 22020847
chr2 26258479 26258488 NKX3-2 JASPAR yes 22020848
chr2 26258493 26258501 HOXA5 JASPAR yes 22020849
chr2 26258494 26258504 EN2 JASPAR yes 22020850
chr2 26258495 26258503 BARX1 JASPAR yes 22020851
chr2 26258509 26258517 BARX1 JASPAR yes 22020852
chr2 26258510 26258521 TBX20 JASPAR yes 22020853
chr2 26258510 26258528 IRF2 JASPAR yes 22020854
chr2 26258511 26258522 CEBPA JASPAR yes 22020855
chr2 26258511 26258523 HLF JASPAR yes 22020856
chr2 26258512 26258523 CEBPB JASPAR yes 22020857
chr2 26258532 26258543 HOXA10 JASPAR yes 22020858
chr2 26258533 26258542 CDX1 JASPAR yes 22020859
chr2 26258550 26258560 MAX JASPAR yes 22020860
chr2 26258550 26258561 USF1 JASPAR yes 22020861
SNP sites on vista30748[chr2:26258152-26258567]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 26258359 rs77074135 G C
PRDM1
5597210
chr2 26258396 rs575732935 A T
ESRRA NR4A2
5597211
chr2 26258411 rs141197479 C T
PHOX2A PROP1
5597212
chr2 26258543 rs76341053 T G
HOXA10
5597213
Genes possibly regulated by vista30748[chr2:26258152-26258567]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 26149471 26205618 - KIF3C ENSG00000084731.9 26205618 0.72 0.99 2183 47466
chr2 26251074 26251481 - AC013449.1 ENSG00000268412.1 26251481 0.8 1.0 2184 93329
chr2 26256976 26360323 + RAB10 ENSG00000084733.6 26256976 0.68 0.99 2185 98824
Expression level of Genes
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miRNAs possibly regulated by vista30748[chr2:26258152-26258567]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results