EnhancerDB
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  3. vista3076[chr1:117169735-117170114]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3076[chr1:117169735-117170114]
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Tissue distribution of vista3076
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Transcription factor that possibly regulate vista3076[chr1:117169735-117170114]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117169727 117169741 GATA2 JASPAR yes 31823606
chr1 117169727 117169741 GATA2 JASPAR yes 118357644
chr1 117169729 117169736 GATA3 TRANSFAC yes 31823607
chr1 117169729 117169736 GATA3 TRANSFAC yes 118357645
chr1 117169729 117169737 GATA5 JASPAR yes 31823608
chr1 117169729 117169737 GATA5 JASPAR yes 118357646
chr1 117169731 117169746 MEF2C JASPAR yes 31823609
chr1 117169731 117169746 MEF2C JASPAR yes 118357647
chr1 117169732 117169735 MYB TRANSFAC yes 31823610
chr1 117169732 117169735 MYB TRANSFAC yes 118357648
chr1 117169751 117169760 HIC2 JASPAR yes 31823611
chr1 117169751 117169760 HIC2 JASPAR yes 118357649
chr1 117169754 117169758 LFA1 TRANSFAC yes 31823612
chr1 117169754 117169758 LFA1 TRANSFAC yes 118357650
chr1 117169757 117169761 YY1 TRANSFAC yes 31823613
chr1 117169757 117169761 YY1 TRANSFAC yes 118357651
chr1 117169773 117169777 LFA1 TRANSFAC yes 31823614
chr1 117169773 117169777 LFA1 TRANSFAC yes 118357652
chr1 117169811 117169830 PAX5 JASPAR yes 31823615
chr1 117169811 117169830 PAX5 JASPAR yes 118357653
chr1 117169837 117169852 STAT1 JASPAR yes 31823616
chr1 117169837 117169852 STAT1 JASPAR yes 118357654
chr1 117169839 117169850 STAT1 JASPAR yes 31823617
chr1 117169839 117169850 STAT1 JASPAR yes 118357655
chr1 117169881 117169886 ETS2 TRANSFAC yes 31823618
chr1 117169881 117169886 ETS2 TRANSFAC yes 118357656
chr1 117169898 117169902 YY1 TRANSFAC yes 31823619
chr1 117169898 117169902 YY1 TRANSFAC yes 118357657
chr1 117169907 117169915 DLX6 JASPAR yes 31823620
chr1 117169907 117169915 MSX1 JASPAR yes 31823621
chr1 117169907 117169915 DLX6 JASPAR yes 118357658
chr1 117169907 117169915 MSX1 JASPAR yes 118357659
chr1 117169909 117169917 HOXA5 JASPAR yes 31823622
chr1 117169909 117169917 HOXA5 JASPAR yes 118357660
chr1 117169924 117169928 YY1 TRANSFAC yes 31823623
chr1 117169924 117169928 YY1 TRANSFAC yes 118357661
chr1 117169926 117169943 PAX1 JASPAR yes 31823624
chr1 117169926 117169943 PAX9 JASPAR yes 31823625
chr1 117169926 117169943 PAX1 JASPAR yes 118357662
chr1 117169926 117169943 PAX9 JASPAR yes 118357663
chr1 117169927 117169941 PAX6 JASPAR yes 31823626
chr1 117169927 117169941 PAX6 JASPAR yes 118357664
chr1 117169936 117169940 YY1 TRANSFAC yes 31823627
chr1 117169936 117169940 YY1 TRANSFAC yes 118357665
chr1 117169939 117169960 REST JASPAR yes 31823628
chr1 117169939 117169960 REST JASPAR yes 118357666
chr1 117169950 117169955 GATA2 JASPAR yes 31823629
chr1 117169950 117169955 GATA2 JASPAR yes 118357667
chr1 117169981 117169985 H4TF2 TRANSFAC yes 31823630
chr1 117169981 117169985 H4TF2 TRANSFAC yes 118357668
chr1 117169983 117169989 MZF1 JASPAR yes 31823631
chr1 117169983 117169989 MZF1 JASPAR yes 118357669
chr1 117170020 117170025 H4TF1 TRANSFAC yes 31823632
chr1 117170020 117170025 H4TF1 TRANSFAC yes 118357670
chr1 117170046 117170058 ZBTB7C JASPAR yes 31823633
chr1 117170046 117170058 ZBTB7C JASPAR yes 118357671
chr1 117170079 117170082 MYB TRANSFAC yes 31823634
chr1 117170079 117170082 MYB TRANSFAC yes 118357672
SNP sites on vista3076[chr1:117169735-117170114]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117169776 rs144191133 G T
LFA1
590091
chr1 117169921 rs567444512 C T no 590092
chr1 117169932 rs10923124 C T
PAX1 PAX6 PAX9
590093
chr1 117169934 rs191567687 C T
PAX1 PAX6 PAX9
590094
Genes possibly regulated by vista3076[chr1:117169735-117170114]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117057157 117113661 - CD58 ENSG00000116815.11 117113661 0.93 0.99 1061 43926
chr1 117117031 117210375 - IGSF3 ENSG00000143061.13 117210375 0.85 1.0 1062 59739
chr1 117236734 117249225 + C1orf137 ENSG00000203864.1 117236734 0.0 0.0 1063 33380
Expression level of Genes
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miRNAs possibly regulated by vista3076[chr1:117169735-117170114]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results