EnhancerDB
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  3. vista30774[chr2:27493313-27493366]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30774[chr2:27493313-27493366]
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Tissue distribution of vista30774
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Transcription factor that possibly regulate vista30774[chr2:27493313-27493366]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 27493309 27493313 H1TF2 TRANSFAC yes 22022026
chr2 27493309 27493313 NFE TRANSFAC yes 22022027
chr2 27493309 27493313 SRF TRANSFAC yes 22022028
chr2 27493309 27493313 H1TF2 TRANSFAC yes 72576737
chr2 27493309 27493313 NFE TRANSFAC yes 72576738
chr2 27493309 27493313 SRF TRANSFAC yes 72576739
chr2 27493309 27493319 HOXB13 JASPAR yes 22022029
chr2 27493309 27493319 HOXB13 JASPAR yes 72576740
chr2 27493311 27493320 SRY JASPAR yes 22022030
chr2 27493311 27493320 SRY JASPAR yes 72576741
chr2 27493313 27493316 MYB TRANSFAC yes 22022031
chr2 27493313 27493316 MYB TRANSFAC yes 72576742
chr2 27493317 27493330 POU3F3 JASPAR yes 22022032
chr2 27493317 27493330 POU3F3 JASPAR yes 72576743
chr2 27493331 27493341 SP1 JASPAR yes 22022033
chr2 27493331 27493341 SP1 JASPAR yes 72576744
chr2 27493332 27493341 SP1 TRANSFAC yes 22022034
chr2 27493332 27493341 SP1 TRANSFAC yes 72576745
chr2 27493333 27493339 MAZ TRANSFAC yes 22022035
chr2 27493333 27493339 MAZ TRANSFAC yes 72576746
chr2 27493334 27493344 MZF1 JASPAR yes 22022036
chr2 27493334 27493344 MZF1 JASPAR yes 72576747
chr2 27493338 27493343 ETS2 TRANSFAC yes 22022037
chr2 27493338 27493343 ETS2 TRANSFAC yes 72576748
chr2 27493349 27493364 PRDM1 JASPAR yes 22022038
chr2 27493349 27493364 PRDM1 JASPAR yes 72576749
chr2 27493355 27493360 ETS2 TRANSFAC yes 22022039
chr2 27493355 27493360 ETS2 TRANSFAC yes 72576750
chr2 27493362 27493377 RFX5 JASPAR yes 22022040
chr2 27493362 27493377 RFX5 JASPAR yes 72576751
SNP sites on vista30774[chr2:27493313-27493366]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista30774[chr2:27493313-27493366]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 27422455 27435826 - SLC5A6 ENSG00000138074.10 27435826 0.89 0.99 2210 42513
chr2 27434895 27440046 + ATRAID ENSG00000138085.12 27434895 0.57 0.99 2211 41582
chr2 27440258 27466811 + CAD ENSG00000084774.9 27440258 0.72 1.0 2212 46945
chr2 27476552 27498685 - SLC30A3 ENSG00000115194.6 27498685 0.93 1.0 2213 94681
chr2 27498289 27504367 + DNAJC5G ENSG00000163793.8 27498289 0.95 1.0 2214 95077
chr2 27505260 27530307 + TRIM54 ENSG00000138100.9 27505260 0.99 1.0 2215 88106
chr2 27530268 27531313 - UCN ENSG00000163794.6 27531313 0.64 1.0 2216 62053
chr2 27532360 27548547 - MPV17 ENSG00000115204.10 27548547 0.77 0.99 2217 44819
chr2 27548716 27579868 - GTF3C2 ENSG00000115207.9 27579868 0.64 0.99 2218 13498
chr2 27587219 27593353 - EIF2B4 ENSG00000115211.11 27593353 0.59 1.0 2219 13
Expression level of Genes
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miRNAs possibly regulated by vista30774[chr2:27493313-27493366]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results