EnhancerDB
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  3. vista3078[chr1:117280613-117280924]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3078[chr1:117280613-117280924]
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Tissue distribution of vista3078
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Transcription factor that possibly regulate vista3078[chr1:117280613-117280924]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117280615 117280629 PLAG1 JASPAR yes 31833865
chr1 117280615 117280629 PLAG1 JASPAR yes 118357685
chr1 117280629 117280643 TCF7L2 JASPAR yes 31833866
chr1 117280629 117280643 TCF7L2 JASPAR yes 118357686
chr1 117280637 117280645 NR4A2 JASPAR yes 31833867
chr1 117280637 117280645 NR4A2 JASPAR yes 118357687
chr1 117280669 117280682 POU2F2 JASPAR yes 31833868
chr1 117280669 117280682 POU2F2 JASPAR yes 118357688
chr1 117280669 117280683 POU1F1 JASPAR yes 31833869
chr1 117280669 117280683 POU1F1 JASPAR yes 118357689
chr1 117280670 117280682 POU3F1 JASPAR yes 31833870
chr1 117280670 117280682 POU3F2 JASPAR yes 31833871
chr1 117280670 117280682 POU3F1 JASPAR yes 118357690
chr1 117280670 117280682 POU3F2 JASPAR yes 118357691
chr1 117280670 117280683 POU3F3 JASPAR yes 31833872
chr1 117280670 117280683 POU3F3 JASPAR yes 118357692
chr1 117280671 117280683 POU2F1 JASPAR yes 31833873
chr1 117280671 117280683 POU2F1 JASPAR yes 118357693
chr1 117280672 117280679 POU2F1 TRANSFAC yes 31833874
chr1 117280672 117280679 POU2F2C TRANSFAC yes 31833875
chr1 117280672 117280679 POU2F2 TRANSFAC yes 31833876
chr1 117280672 117280679 POU2F1 TRANSFAC yes 118357694
chr1 117280672 117280679 POU2F2C TRANSFAC yes 118357695
chr1 117280672 117280679 POU2F2 TRANSFAC yes 118357696
chr1 117280672 117280680 POU2F1 TRANSFAC yes 31833877
chr1 117280672 117280680 POU2F1 TRANSFAC yes 118357697
chr1 117280672 117280681 POU3F4 JASPAR yes 31833878
chr1 117280672 117280681 POU5F1B JASPAR yes 31833879
chr1 117280672 117280681 POU3F4 JASPAR yes 118357698
chr1 117280672 117280681 POU5F1B JASPAR yes 118357699
chr1 117280677 117280681 YY1 TRANSFAC yes 31833880
chr1 117280677 117280681 YY1 TRANSFAC yes 118357700
chr1 117280680 117280694 PAX6 JASPAR yes 31833881
chr1 117280680 117280694 PAX6 JASPAR yes 118357701
chr1 117280686 117280707 IRF1 JASPAR yes 31833882
chr1 117280686 117280707 IRF1 JASPAR yes 118357702
chr1 117280688 117280703 STAT2 JASPAR yes 31833883
chr1 117280688 117280703 STAT2 JASPAR yes 118357703
chr1 117280689 117280703 STAT1 JASPAR yes 31833884
chr1 117280689 117280703 STAT1 JASPAR yes 118357704
chr1 117280692 117280707 MEF2A JASPAR yes 31833885
chr1 117280692 117280707 MEF2A JASPAR yes 118357705
chr1 117280693 117280708 MEF2C JASPAR yes 31833886
chr1 117280693 117280708 MEF2C JASPAR yes 118357706
chr1 117280699 117280713 PAX6 JASPAR yes 31833887
chr1 117280699 117280713 PAX6 JASPAR yes 118357707
chr1 117280713 117280724 NFIL3 JASPAR yes 31833888
chr1 117280713 117280724 NFIL3 JASPAR yes 118357708
chr1 117280713 117280727 ATF7 JASPAR yes 31833889
chr1 117280713 117280727 ATF7 JASPAR yes 118357709
chr1 117280714 117280718 YY1 TRANSFAC yes 31833890
chr1 117280714 117280718 YY1 TRANSFAC yes 118357710
chr1 117280714 117280726 DBP JASPAR yes 31833891
chr1 117280714 117280726 HLF JASPAR yes 31833892
chr1 117280714 117280726 JDP2 JASPAR yes 31833893
chr1 117280714 117280726 TEF JASPAR yes 31833894
chr1 117280714 117280726 DBP JASPAR yes 118357711
chr1 117280714 117280726 HLF JASPAR yes 118357712
chr1 117280714 117280726 JDP2 JASPAR yes 118357713
chr1 117280714 117280726 TEF JASPAR yes 118357714
chr1 117280714 117280727 ATF4 JASPAR yes 31833895
chr1 117280714 117280727 ATF4 JASPAR yes 118357715
chr1 117280714 117280729 JUND JASPAR yes 31833896
chr1 117280714 117280729 JUND JASPAR yes 118357716
chr1 117280715 117280728 JUN JASPAR yes 31833897
chr1 117280715 117280728 JUN JASPAR yes 118357717
chr1 117280806 117280813 SPI1 JASPAR yes 31833898
chr1 117280806 117280813 SPI1 JASPAR yes 118357718
chr1 117280815 117280823 FOXC1 JASPAR yes 31833899
chr1 117280815 117280823 FOXC1 JASPAR yes 118357719
chr1 117280823 117280835 GLI2 JASPAR yes 31833900
chr1 117280823 117280835 GLI2 JASPAR yes 118357720
chr1 117280856 117280869 SMAD2 JASPAR yes 31833901
chr1 117280856 117280869 SMAD2 JASPAR yes 118357721
chr1 117280858 117280869 E2F6 JASPAR yes 31833902
chr1 117280858 117280869 E2F6 JASPAR yes 118357722
chr1 117280895 117280899 NFE TRANSFAC yes 31833903
chr1 117280895 117280899 NFE TRANSFAC yes 118357723
chr1 117280895 117280900 GATA1 TRANSFAC yes 31833904
chr1 117280895 117280900 GATA1 TRANSFAC yes 118357724
chr1 117280895 117280901 GATA3 JASPAR yes 31833905
chr1 117280895 117280901 GATA3 JASPAR yes 118357725
chr1 117280900 117280907 SPIB JASPAR yes 31833906
chr1 117280900 117280907 SPIB JASPAR yes 118357726
chr1 117280909 117280918 THAP1 JASPAR yes 31833907
chr1 117280909 117280918 THAP1 JASPAR yes 118357727
chr1 117280912 117280916 LFA1 TRANSFAC yes 31833908
chr1 117280912 117280916 LFA1 TRANSFAC yes 118357728
SNP sites on vista3078[chr1:117280613-117280924]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117280696 rs798000 C T
IRF1 MEF2A MEF2C STAT1 STAT2
591094
chr1 117280732 rs151145660 T G no 591095
chr1 117280805 rs544457375 A G no 591096
chr1 117280876 rs187766862 T C no 591097
chr1 117280906 rs141403451 C T
SPIB
591098
Genes possibly regulated by vista3078[chr1:117280613-117280924]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117117031 117210375 - IGSF3 ENSG00000143061.13 117210375 0.85 1.0 1062 29762
chr1 117236734 117249225 + C1orf137 ENSG00000203864.1 117236734 0.0 0.0 1063 56121
chr1 117297007 117311850 + CD2 ENSG00000116824.4 117297007 0.94 1.0 1064 83917
Expression level of Genes
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miRNAs possibly regulated by vista3078[chr1:117280613-117280924]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results