EnhancerDB
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  3. vista30790[chr2:27988549-27989353]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30790[chr2:27988549-27989353]
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Tissue distribution of vista30790
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Transcription factor that possibly regulate vista30790[chr2:27988549-27989353]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 27988516 27989270 POLR2A UCSC Txn Factor no Conserved 108431551
chr2 27988553 27988566 ZBTB18 JASPAR yes 22022689
chr2 27988578 27988582 TEAD2 TRANSFAC yes 22022690
chr2 27988578 27988583 TBP TRANSFAC yes 22022691
chr2 27988594 27988599 SP1 TRANSFAC yes 22022692
chr2 27988594 27988600 SP1 TRANSFAC yes 22022693
chr2 27988594 27988601 SP1 TRANSFAC yes 22022694
chr2 27988613 27988624 FOS JASPAR yes 22022695
chr2 27988615 27988621 JUN TRANSFAC yes 22022696
chr2 27988622 27988630 GATA5 JASPAR yes 22022697
chr2 27988636 27988640 LFA1 TRANSFAC yes 22022698
chr2 27988642 27988652 MAX JASPAR yes 22022699
chr2 27988642 27988652 MLXIPL JASPAR yes 22022700
chr2 27988642 27988652 MLX JASPAR yes 22022701
chr2 27988642 27988652 MNT JASPAR yes 22022702
chr2 27988642 27988652 SREBF2 JASPAR yes 22022703
chr2 27988642 27988652 TFE3 JASPAR yes 22022704
chr2 27988642 27988652 TFEB JASPAR yes 22022705
chr2 27988642 27988652 TFEC JASPAR yes 22022706
chr2 27988642 27988653 USF1 JASPAR yes 22022707
chr2 27988642 27988653 USF2 JASPAR yes 22022708
chr2 27988643 27988650 USF1 JASPAR yes 22022709
chr2 27988643 27988653 MAX JASPAR yes 22022710
chr2 27988644 27988649 MYC TRANSFAC yes 22022711
chr2 27988644 27988649 USF1 TRANSFAC yes 22022712
chr2 27988644 27988649 USF2 TRANSFAC yes 22022713
chr2 27988703 27988723 ESR1 JASPAR yes 22022714
chr2 27988707 27988724 ESR1 JASPAR yes 22022715
chr2 27988707 27988725 ESR2 JASPAR yes 22022716
chr2 27988708 27988723 ESR2 JASPAR yes 22022717
chr2 27988726 27988736 NFATC3 JASPAR yes 22022718
chr2 27988728 27988734 ETS1 JASPAR yes 22022719
chr2 27988742 27988757 HSF1 JASPAR yes 22022720
chr2 27988743 27988756 HSF1 JASPAR yes 22022721
chr2 27988743 27988756 HSF2 JASPAR yes 22022722
chr2 27988743 27988756 HSF4 JASPAR yes 22022723
chr2 27988789 27988800 RUNX1 JASPAR yes 22022724
chr2 27988816 27988826 SP1 JASPAR yes 22022725
chr2 27988818 27988823 SP1 TRANSFAC yes 22022726
chr2 27988819 27988824 SP1 TRANSFAC yes 22022727
chr2 27988819 27988825 SP1 TRANSFAC yes 22022728
chr2 27988861 27988872 TFAP2A JASPAR yes 22022729
chr2 27988861 27988872 TFAP2B JASPAR yes 22022730
chr2 27988861 27988872 TFAP2C JASPAR yes 22022731
chr2 27988868 27988879 NRF1 JASPAR yes 22022732
chr2 27988869 27988880 NRF1 JASPAR yes 22022733
chr2 27988870 27988878 NRF1 TRANSFAC yes 22022734
chr2 27988907 27988917 SP1 JASPAR yes 22022735
chr2 27988923 27988935 TEAD1 JASPAR yes 22022736
chr2 27988926 27988934 TEAD3 JASPAR yes 22022737
chr2 27988949 27988970 ZNF263 JASPAR yes 22022738
chr2 27988980 27988990 SREBF2 JASPAR yes 22022739
chr2 27988987 27988991 YY1 TRANSFAC yes 22022740
chr2 27989012 27989021 SNAI2 JASPAR yes 22022741
chr2 27989012 27989022 FIGLA JASPAR yes 22022742
chr2 27989012 27989022 TCF3 JASPAR yes 22022743
chr2 27989045 27989051 MZF1 JASPAR yes 22022744
chr2 27989053 27989061 MEIS3 JASPAR yes 22022745
chr2 27989054 27989058 NFE TRANSFAC yes 22022746
chr2 27989057 27989072 NFYB JASPAR yes 22022747
chr2 27989059 27989075 NFYA JASPAR yes 22022748
chr2 27989060 27989078 NFYA JASPAR yes 22022749
chr2 27989061 27989073 PBX1 JASPAR yes 22022750
chr2 27989064 27989068 H1TF2 TRANSFAC yes 22022751
chr2 27989064 27989068 NFE TRANSFAC yes 22022752
chr2 27989064 27989068 SRF TRANSFAC yes 22022753
chr2 27989075 27989090 MYBL2 JASPAR yes 22022754
chr2 27989082 27989085 MYB TRANSFAC yes 22022755
chr2 27989084 27989104 PPARG JASPAR yes 22022756
chr2 27989085 27989105 PPARG JASPAR yes 22022757
chr2 27989108 27989122 BATF3 JASPAR yes 22022758
chr2 27989113 27989117 NFE TRANSFAC yes 22022759
chr2 27989118 27989133 LEF1 JASPAR yes 22022760
chr2 27989119 27989133 TCF7L2 JASPAR yes 22022761
chr2 27989142 27989153 EBF1 JASPAR yes 22022762
chr2 27989149 27989153 LFA1 TRANSFAC yes 22022763
chr2 27989152 27989161 ZEB1 JASPAR yes 22022764
chr2 27989157 27989167 TEAD1 JASPAR yes 22022765
chr2 27989157 27989172 RUNX2 JASPAR yes 22022766
chr2 27989159 27989179 RREB1 JASPAR yes 22022767
chr2 27989161 27989171 GCM2 JASPAR yes 22022768
chr2 27989166 27989177 E2F6 JASPAR yes 22022769
chr2 27989166 27989180 PLAG1 JASPAR yes 22022770
chr2 27989167 27989172 SP1 TRANSFAC yes 22022771
chr2 27989168 27989178 SP1 JASPAR yes 22022772
chr2 27989170 27989175 ETS2 TRANSFAC yes 22022773
chr2 27989192 27989207 LEF1 JASPAR yes 22022774
chr2 27989203 27989214 STAT3 JASPAR yes 22022775
chr2 27989207 27989215 EHF JASPAR yes 22022776
chr2 27989213 27989223 GBX2 JASPAR yes 22022777
chr2 27989213 27989223 MNX1 JASPAR yes 22022778
chr2 27989214 27989222 BARX1 JASPAR yes 22022779
chr2 27989214 27989222 BSX JASPAR yes 22022780
chr2 27989214 27989222 ISL2 JASPAR yes 22022781
chr2 27989214 27989222 LMX1B JASPAR yes 22022782
chr2 27989214 27989222 MSX1 JASPAR yes 22022783
chr2 27989214 27989222 MSX2 JASPAR yes 22022784
chr2 27989239 27989254 MEF2C JASPAR yes 22022785
chr2 27989242 27989246 YY1 TRANSFAC yes 22022786
chr2 27989263 27989268 SP1 TRANSFAC yes 22022787
chr2 27989279 27989292 HSF2 JASPAR yes 22022788
chr2 27989281 27989291 TEAD1 JASPAR yes 22022789
chr2 27989281 27989291 TEAD4 JASPAR yes 22022790
chr2 27989282 27989290 TEAD3 JASPAR yes 22022791
chr2 27989287 27989302 FOXP1 JASPAR yes 22022792
chr2 27989288 27989299 FOXA1 JASPAR yes 22022793
chr2 27989288 27989303 FOXA1 JASPAR yes 22022794
chr2 27989289 27989297 FOXL1 JASPAR yes 22022795
chr2 27989289 27989300 FOXB1 JASPAR yes 22022796
chr2 27989289 27989300 FOXC1 JASPAR yes 22022797
chr2 27989289 27989301 FOXC2 JASPAR yes 22022798
chr2 27989290 27989301 FOXP2 JASPAR yes 22022799
chr2 27989291 27989299 FOXO3 JASPAR yes 22022800
chr2 27989292 27989299 FOXD2 JASPAR yes 22022801
chr2 27989292 27989299 FOXI1 JASPAR yes 22022802
chr2 27989292 27989299 FOXL1 JASPAR yes 22022803
chr2 27989292 27989299 FOXO4 JASPAR yes 22022804
chr2 27989292 27989299 FOXO6 JASPAR yes 22022805
chr2 27989292 27989299 FOXP3 JASPAR yes 22022806
chr2 27989292 27989300 FOXD1 JASPAR yes 22022807
chr2 27989292 27989300 FOXG1 JASPAR yes 22022808
chr2 27989292 27989300 FOXO3 JASPAR yes 22022809
chr2 27989325 27989336 ELF5 JASPAR yes 22022810
chr2 27989325 27989338 ELF1 JASPAR yes 22022811
chr2 27989325 27989339 SPI1 JASPAR yes 22022812
chr2 27989325 27989339 SPIC JASPAR yes 22022813
chr2 27989326 27989333 SPI1 JASPAR yes 22022814
chr2 27989326 27989334 EHF JASPAR yes 22022815
SNP sites on vista30790[chr2:27988549-27989353]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 27988569 rs538767796 C T
POLR2A
5604269
chr2 27988680 rs146404631 CAG C
POLR2A
5604270
chr2 27988680 rs796126765 C CA
POLR2A
5604271
chr2 27988680 rs925783535 C CA
POLR2A
5604272
chr2 27988809 rs570828135 T C
POLR2A
5604273
chr2 27988821 rs13013484 G A
POLR2A SP1
5604274
chr2 27988913 rs114022010 C T
POLR2A SP1
5604275
chr2 27989110 rs55861662 G A
BATF3 POLR2A
5604276
chr2 27989138 rs192730594 C T
POLR2A
5604277
chr2 27989193 rs577364136 C G
LEF1 POLR2A
5604278
chr2 27989302 rs560102083 T C
FOXA1 FOXP1
5604279
Genes possibly regulated by vista30790[chr2:27988549-27989353]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 27928653 27938599 - AC074091.13 ENSG00000205334.2 27938599 0.95 0.92 2235 50050
chr2 27994584 28210954 + MRPL33 ENSG00000243147.3 27994584 0.76 0.97 2236 94769
chr2 27998851 28009186 - AC110084.1 ENSG00000268656.1 28009186 0.0 1.0 2237 80167
Expression level of Genes
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miRNAs possibly regulated by vista30790[chr2:27988549-27989353]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results