EnhancerDB
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  3. vista30804[chr2:28179877-28180142]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30804[chr2:28179877-28180142]
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Tissue distribution of vista30804
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Transcription factor that possibly regulate vista30804[chr2:28179877-28180142]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28179812 28180068 CEBPB UCSC Txn Factor no Conserved 108431567
chr2 28179900 28179905 ETS2 TRANSFAC yes 22023462
chr2 28179900 28179905 ETS2 TRANSFAC yes 72602547
chr2 28179918 28179929 CEBPA JASPAR yes 22023463
chr2 28179918 28179929 CEBPA JASPAR yes 72602548
chr2 28179919 28179930 CEBPB JASPAR yes 22023464
chr2 28179919 28179930 CEBPB JASPAR yes 72602549
chr2 28179939 28179943 ESR1 TRANSFAC yes 22023465
chr2 28179939 28179943 ESR1 TRANSFAC yes 72602550
chr2 28179959 28179970 CEBPB JASPAR yes 22023466
chr2 28179959 28179970 CEBPB JASPAR yes 72602551
chr2 28179960 28179971 CEBPA JASPAR yes 22023467
chr2 28179960 28179971 CEBPA JASPAR yes 72602552
chr2 28179985 28179991 TBP TRANSFAC yes 22023468
chr2 28179985 28179991 TBP TRANSFAC yes 72602553
chr2 28180001 28180022 IRF1 JASPAR yes 22023469
chr2 28180001 28180022 IRF1 JASPAR yes 72602554
chr2 28180002 28180023 ZNF263 JASPAR yes 22023470
chr2 28180002 28180023 ZNF263 JASPAR yes 72602555
chr2 28180004 28180014 GABPA JASPAR yes 22023471
chr2 28180004 28180014 GABPA JASPAR yes 72602556
chr2 28180004 28180017 ELF1 JASPAR yes 22023472
chr2 28180004 28180017 ELF1 JASPAR yes 72602557
chr2 28180004 28180018 SPI1 JASPAR yes 22023473
chr2 28180004 28180018 SPIC JASPAR yes 22023474
chr2 28180004 28180018 SPI1 JASPAR yes 72602558
chr2 28180004 28180018 SPIC JASPAR yes 72602559
chr2 28180005 28180026 ZNF263 JASPAR yes 22023475
chr2 28180005 28180026 ZNF263 JASPAR yes 72602560
chr2 28180023 28180038 FOXP1 JASPAR yes 22023476
chr2 28180023 28180038 FOXP1 JASPAR yes 72602561
chr2 28180024 28180035 FOXP2 JASPAR yes 22023477
chr2 28180024 28180035 FOXP2 JASPAR yes 72602562
chr2 28180038 28180042 YY1 TRANSFAC yes 22023478
chr2 28180038 28180042 YY1 TRANSFAC yes 72602563
chr2 28180038 28180053 JUND JASPAR yes 22023479
chr2 28180038 28180053 JUND JASPAR yes 72602564
chr2 28180061 28180073 HES5 JASPAR yes 22023480
chr2 28180061 28180073 HES5 JASPAR yes 72602565
chr2 28180065 28180078 SMAD2 JASPAR yes 22023481
chr2 28180065 28180078 SMAD2 JASPAR yes 72602566
chr2 28180072 28180088 SOX4 JASPAR yes 22023482
chr2 28180072 28180088 SOX4 JASPAR yes 72602567
chr2 28180073 28180088 SOX21 JASPAR yes 22023483
chr2 28180073 28180088 SOX21 JASPAR yes 72602568
chr2 28180113 28180119 ZNF354C JASPAR yes 22023484
chr2 28180113 28180119 ZNF354C JASPAR yes 72602569
chr2 28180123 28180129 TCF1 TRANSFAC yes 22023485
chr2 28180123 28180129 TCF1 TRANSFAC yes 72602570
SNP sites on vista30804[chr2:28179877-28180142]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28179923 rs77574754 T G
CEBPA CEBPB
5605053
chr2 28180057 rs138587720 G A
CEBPB
5605054
Genes possibly regulated by vista30804[chr2:28179877-28180142]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28004231 28113965 - RBKS ENSG00000171174.9 28113965 0.87 1.0 2238 34088
chr2 28112808 28561768 + BRE ENSG00000158019.16 28112808 0.9 0.99 2239 32931
Expression level of Genes
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miRNAs possibly regulated by vista30804[chr2:28179877-28180142]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results