EnhancerDB
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  3. vista30807[chr2:28183212-28183402]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30807[chr2:28183212-28183402]
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Tissue distribution of vista30807
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Transcription factor that possibly regulate vista30807[chr2:28183212-28183402]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28183256 28183270 MTF1 JASPAR yes 22023689
chr2 28183256 28183270 MTF1 JASPAR yes 72603131
chr2 28183261 28183272 NRL JASPAR yes 22023690
chr2 28183261 28183272 NRL JASPAR yes 72603132
chr2 28183276 28183285 SRY JASPAR yes 22023691
chr2 28183276 28183285 SRY JASPAR yes 72603133
chr2 28183279 28183291 HNF1B JASPAR yes 22023692
chr2 28183279 28183291 HNF1B JASPAR yes 72603134
chr2 28183280 28183289 SRY JASPAR yes 22023693
chr2 28183280 28183289 SRY JASPAR yes 72603135
chr2 28183282 28183291 SOX9 JASPAR yes 22023694
chr2 28183282 28183291 SOX9 JASPAR yes 72603136
chr2 28183288 28183302 NR2F1 JASPAR yes 22023695
chr2 28183288 28183302 NR2F1 JASPAR yes 72603137
chr2 28183295 28183309 TCF7L2 JASPAR yes 22023696
chr2 28183295 28183309 TCF7L2 JASPAR yes 72603138
chr2 28183299 28183305 TCF1 TRANSFAC yes 22023697
chr2 28183299 28183305 TCF1 TRANSFAC yes 72603139
chr2 28183309 28183314 NFY TRANSFAC yes 22023698
chr2 28183309 28183314 NFY TRANSFAC yes 72603140
chr2 28183309 28183324 RUNX2 JASPAR yes 22023699
chr2 28183309 28183324 RUNX2 JASPAR yes 72603141
chr2 28183313 28183325 IRF1 JASPAR yes 22023700
chr2 28183313 28183325 IRF1 JASPAR yes 72603142
chr2 28183314 28183323 RUNX2 JASPAR yes 22023701
chr2 28183314 28183323 RUNX2 JASPAR yes 72603143
chr2 28183314 28183335 IRF1 JASPAR yes 22023702
chr2 28183314 28183335 IRF1 JASPAR yes 72603144
chr2 28183316 28183331 STAT2 JASPAR yes 22023703
chr2 28183316 28183331 STAT2 JASPAR yes 72603145
chr2 28183331 28183337 MZF1 JASPAR yes 22023704
chr2 28183331 28183337 MZF1 JASPAR yes 72603146
chr2 28183341 28183356 RUNX2 JASPAR yes 22023705
chr2 28183341 28183356 RUNX2 JASPAR yes 72603147
chr2 28183344 28183355 RUNX1 JASPAR yes 22023706
chr2 28183344 28183355 RUNX1 JASPAR yes 72603148
chr2 28183345 28183355 RUNX3 JASPAR yes 22023707
chr2 28183345 28183355 RUNX3 JASPAR yes 72603149
chr2 28183346 28183355 RUNX2 JASPAR yes 22023708
chr2 28183346 28183355 RUNX2 JASPAR yes 72603150
chr2 28183353 28183357 YY1 TRANSFAC yes 22023709
chr2 28183353 28183357 YY1 TRANSFAC yes 72603151
chr2 28183357 28183371 ONECUT3 JASPAR yes 22023710
chr2 28183357 28183371 ONECUT3 JASPAR yes 72603152
chr2 28183367 28183377 NFIA JASPAR yes 22023711
chr2 28183367 28183377 NFIA JASPAR yes 72603153
chr2 28183368 28183377 NFIX JASPAR yes 22023712
chr2 28183368 28183377 NFIX JASPAR yes 72603154
chr2 28183369 28183375 NFIC JASPAR yes 22023713
chr2 28183369 28183375 NFIC JASPAR yes 72603155
chr2 28183398 28183412 XBP1 JASPAR yes 22023714
chr2 28183398 28183412 XBP1 JASPAR yes 72603156
chr2 28183399 28183413 CREB3 JASPAR yes 22023715
chr2 28183399 28183413 CREB3L1 JASPAR yes 22023716
chr2 28183399 28183413 CREB3 JASPAR yes 72603157
chr2 28183399 28183413 CREB3L1 JASPAR yes 72603158
SNP sites on vista30807[chr2:28183212-28183402]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista30807[chr2:28183212-28183402]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28004231 28113965 - RBKS ENSG00000171174.9 28113965 0.87 1.0 2238 30753
chr2 28112808 28561768 + BRE ENSG00000158019.16 28112808 0.9 0.99 2239 29596
Expression level of Genes
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miRNAs possibly regulated by vista30807[chr2:28183212-28183402]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results