EnhancerDB
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  3. vista30820[chr2:28544438-28544734]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30820[chr2:28544438-28544734]
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Tissue distribution of vista30820
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Transcription factor that possibly regulate vista30820[chr2:28544438-28544734]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28544445 28544460 FOXP1 JASPAR yes 22024353
chr2 28544445 28544460 FOXP1 JASPAR yes 72637970
chr2 28544448 28544459 FOXP2 JASPAR yes 22024354
chr2 28544448 28544459 FOXP2 JASPAR yes 72637971
chr2 28544449 28544457 FOXO3 JASPAR yes 22024355
chr2 28544449 28544457 FOXO3 JASPAR yes 72637972
chr2 28544450 28544462 IRF1 JASPAR yes 22024356
chr2 28544450 28544462 IRF1 JASPAR yes 72637973
chr2 28544468 28544485 BCL6B JASPAR yes 22024357
chr2 28544468 28544485 BCL6B JASPAR yes 72637974
chr2 28544477 28544487 TEAD4 JASPAR yes 22024358
chr2 28544477 28544487 TEAD4 JASPAR yes 72637975
chr2 28544481 28544486 ETS2 TRANSFAC yes 22024359
chr2 28544481 28544486 ETS2 TRANSFAC yes 72637976
chr2 28544533 28544539 NFIC JASPAR yes 22024360
chr2 28544533 28544539 NFIC JASPAR yes 72637977
chr2 28544539 28544547 SP1 TRANSFAC yes 22024361
chr2 28544539 28544547 SP1 TRANSFAC yes 72637978
chr2 28544541 28544547 MAZ TRANSFAC yes 22024362
chr2 28544541 28544547 MAZ TRANSFAC yes 72637979
chr2 28544556 28544567 STAT3 JASPAR yes 22024363
chr2 28544556 28544567 STAT3 JASPAR yes 72637980
chr2 28544604 28544616 IRF1 JASPAR yes 22024364
chr2 28544604 28544616 IRF1 JASPAR yes 72637981
chr2 28544614 28544620 MZF1 JASPAR yes 22024365
chr2 28544614 28544620 MZF1 JASPAR yes 72637982
chr2 28544631 28544646 MEF2C JASPAR yes 22024366
chr2 28544631 28544646 MEF2C JASPAR yes 72637983
chr2 28544632 28544647 MEF2A JASPAR yes 22024367
chr2 28544632 28544647 MEF2A JASPAR yes 72637984
chr2 28544633 28544645 MEF2A JASPAR yes 22024368
chr2 28544633 28544645 MEF2B JASPAR yes 22024369
chr2 28544633 28544645 MEF2D JASPAR yes 22024370
chr2 28544633 28544645 MEF2A JASPAR yes 72637985
chr2 28544633 28544645 MEF2B JASPAR yes 72637986
chr2 28544633 28544645 MEF2D JASPAR yes 72637987
chr2 28544634 28544644 MEF2A JASPAR yes 22024371
chr2 28544634 28544644 MEF2A JASPAR yes 72637988
chr2 28544655 28544660 H4TF1 TRANSFAC yes 22024372
chr2 28544655 28544660 H4TF1 TRANSFAC yes 72637989
chr2 28544660 28544664 YY1 TRANSFAC yes 22024373
chr2 28544660 28544664 YY1 TRANSFAC yes 72637990
chr2 28544666 28544680 PLAG1 JASPAR yes 22024374
chr2 28544666 28544680 PLAG1 JASPAR yes 72637991
chr2 28544671 28544677 NFE2 TRANSFAC yes 22024375
chr2 28544671 28544677 NFE2 TRANSFAC yes 72637992
chr2 28544700 28544721 ZNF263 JASPAR yes 22024376
chr2 28544700 28544721 ZNF263 JASPAR yes 72637993
chr2 28544720 28544725 ETS2 TRANSFAC yes 22024377
chr2 28544720 28544725 ETS2 TRANSFAC yes 72637994
chr2 28544725 28544742 PAX1 JASPAR yes 22024378
chr2 28544725 28544742 PAX9 JASPAR yes 22024379
chr2 28544725 28544742 PAX1 JASPAR yes 72637995
chr2 28544725 28544742 PAX9 JASPAR yes 72637996
chr2 28544732 28544736 ESR1 TRANSFAC yes 22024380
chr2 28544732 28544736 ESR1 TRANSFAC yes 72637997
SNP sites on vista30820[chr2:28544438-28544734]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28544440 rs76344533 G A no 5607641
chr2 28544579 rs116496525 G T no 5607642
chr2 28544595 rs72857138 C A,T no 5607643
chr2 28544646 rs10562139 CTT C
MEF2A MEF2C
5607644
chr2 28544732 rs149929573 G A
ESR1 PAX1 PAX9
5607645
Genes possibly regulated by vista30820[chr2:28544438-28544734]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28615315 28640179 + FOSL2 ENSG00000075426.7 28615315 0.77 1.0 2240 29419
Expression level of Genes
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miRNAs possibly regulated by vista30820[chr2:28544438-28544734]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results