EnhancerDB
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  3. vista3083[chr1:117359174-117359463]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3083[chr1:117359174-117359463]
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Tissue distribution of vista3083
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Transcription factor that possibly regulate vista3083[chr1:117359174-117359463]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117359125 117359343 RUNX3 UCSC Txn Factor no Conserved 107824823
chr1 117359160 117359175 HSF1 JASPAR yes 31840016
chr1 117359160 117359175 HSF1 JASPAR yes 118357929
chr1 117359161 117359174 HSF1 JASPAR yes 31840018
chr1 117359161 117359174 HSF2 JASPAR yes 31840019
chr1 117359161 117359174 HSF4 JASPAR yes 31840020
chr1 117359161 117359174 HSF1 JASPAR yes 118357930
chr1 117359161 117359174 HSF2 JASPAR yes 118357931
chr1 117359161 117359174 HSF4 JASPAR yes 118357932
chr1 117359197 117359209 PKNOX1 JASPAR yes 31840039
chr1 117359197 117359209 PKNOX2 JASPAR yes 31840040
chr1 117359197 117359209 TGIF1 JASPAR yes 31840041
chr1 117359197 117359209 TGIF2 JASPAR yes 31840042
chr1 117359197 117359209 PKNOX1 JASPAR yes 118357933
chr1 117359197 117359209 PKNOX2 JASPAR yes 118357934
chr1 117359197 117359209 TGIF1 JASPAR yes 118357935
chr1 117359197 117359209 TGIF2 JASPAR yes 118357936
chr1 117359198 117359208 MSC JASPAR yes 31840043
chr1 117359198 117359208 MSC JASPAR yes 118357937
chr1 117359202 117359210 MEIS2 JASPAR yes 31840044
chr1 117359202 117359210 MEIS3 JASPAR yes 31840045
chr1 117359202 117359210 MEIS2 JASPAR yes 118357938
chr1 117359202 117359210 MEIS3 JASPAR yes 118357939
chr1 117359203 117359207 NFE TRANSFAC yes 31840046
chr1 117359203 117359207 NFE TRANSFAC yes 118357940
chr1 117359211 117359215 NFE TRANSFAC yes 31840047
chr1 117359211 117359215 NFE TRANSFAC yes 118357941
chr1 117359216 117359230 ZIC1 JASPAR yes 31840048
chr1 117359216 117359230 ZIC1 JASPAR yes 118357942
chr1 117359234 117359243 HIC2 JASPAR yes 31840049
chr1 117359234 117359243 HIC2 JASPAR yes 118357943
chr1 117359237 117359241 LFA1 TRANSFAC yes 31840050
chr1 117359237 117359241 LFA1 TRANSFAC yes 118357944
chr1 117359244 117359259 RUNX2 JASPAR yes 31840051
chr1 117359244 117359259 RUNX2 JASPAR yes 118357945
chr1 117359248 117359258 RUNX3 JASPAR yes 31840052
chr1 117359248 117359258 RUNX3 JASPAR yes 118357946
chr1 117359249 117359258 RUNX2 JASPAR yes 31840053
chr1 117359249 117359258 RUNX2 JASPAR yes 118357947
chr1 117359318 117359324 GATA3 JASPAR yes 31840054
chr1 117359318 117359324 GATA3 JASPAR yes 118357948
chr1 117359328 117359333 GATA2 JASPAR yes 31840055
chr1 117359328 117359333 GATA2 JASPAR yes 118357949
chr1 117359358 117359373 TFAP2A JASPAR yes 31840056
chr1 117359358 117359373 TFAP2C JASPAR yes 31840057
chr1 117359358 117359373 TFAP2A JASPAR yes 118357950
chr1 117359358 117359373 TFAP2C JASPAR yes 118357951
chr1 117359360 117359374 EBF1 JASPAR yes 31840058
chr1 117359360 117359374 EBF1 JASPAR yes 118357952
chr1 117359361 117359372 EBF1 JASPAR yes 31840059
chr1 117359361 117359372 EBF1 JASPAR yes 118357953
chr1 117359369 117359381 TAL1 JASPAR yes 31840060
chr1 117359369 117359381 TAL1 JASPAR yes 118357954
chr1 117359370 117359383 ZBTB18 JASPAR yes 31840061
chr1 117359370 117359383 ZBTB18 JASPAR yes 118357955
chr1 117359371 117359381 NEUROG2 JASPAR yes 31840062
chr1 117359371 117359381 NEUROG2 JASPAR yes 118357956
chr1 117359401 117359412 RUNX1 JASPAR yes 31840063
chr1 117359401 117359412 RUNX1 JASPAR yes 118357957
SNP sites on vista3083[chr1:117359174-117359463]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117359433 rs723788 G A no 591679
Genes possibly regulated by vista3083[chr1:117359174-117359463]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117297007 117311850 + CD2 ENSG00000116824.4 117297007 0.94 1.0 1064 37833
chr1 117452679 117532980 + PTGFRN ENSG00000134247.9 117452679 0.83 1.0 1065 6784
Expression level of Genes
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miRNAs possibly regulated by vista3083[chr1:117359174-117359463]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results