EnhancerDB
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  3. vista30837[chr2:28661421-28661637]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30837[chr2:28661421-28661637]
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Tissue distribution of vista30837
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Transcription factor that possibly regulate vista30837[chr2:28661421-28661637]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28661421 28661424 MYB TRANSFAC yes 22025198
chr2 28661421 28661424 MYB TRANSFAC yes 72650784
chr2 28661433 28661448 HSF1 JASPAR yes 22025199
chr2 28661433 28661448 HSF1 JASPAR yes 72650785
chr2 28661442 28661450 FOXO3 JASPAR yes 22025200
chr2 28661442 28661450 FOXO3 JASPAR yes 72650786
chr2 28661466 28661471 SP1 TRANSFAC yes 22025201
chr2 28661466 28661471 SP1 TRANSFAC yes 72650787
chr2 28661489 28661496 SPIB JASPAR yes 22025202
chr2 28661489 28661496 SPIB JASPAR yes 72650788
chr2 28661497 28661502 GATA1 TRANSFAC yes 22025203
chr2 28661497 28661502 GATA1 TRANSFAC yes 72650789
chr2 28661503 28661507 NFE TRANSFAC yes 22025204
chr2 28661503 28661507 NFE TRANSFAC yes 72650790
chr2 28661507 28661511 H1TF2 TRANSFAC yes 22025205
chr2 28661507 28661511 NFE TRANSFAC yes 22025206
chr2 28661507 28661511 SRF TRANSFAC yes 22025207
chr2 28661507 28661511 H1TF2 TRANSFAC yes 72650791
chr2 28661507 28661511 NFE TRANSFAC yes 72650792
chr2 28661507 28661511 SRF TRANSFAC yes 72650793
chr2 28661561 28661572 FLI1 JASPAR yes 22025208
chr2 28661561 28661572 FLI1 JASPAR yes 72650794
chr2 28661562 28661566 YY1 TRANSFAC yes 22025209
chr2 28661562 28661566 YY1 TRANSFAC yes 72650795
chr2 28661563 28661571 FEV JASPAR yes 22025210
chr2 28661563 28661571 FEV JASPAR yes 72650796
chr2 28661565 28661570 ETS2 TRANSFAC yes 22025211
chr2 28661565 28661570 ETS2 TRANSFAC yes 72650797
chr2 28661575 28661581 GATA3 JASPAR yes 22025212
chr2 28661575 28661581 GATA3 JASPAR yes 72650798
chr2 28661588 28661603 RUNX2 JASPAR yes 22025213
chr2 28661588 28661603 RUNX2 JASPAR yes 72650799
chr2 28661591 28661602 RUNX1 JASPAR yes 22025214
chr2 28661591 28661602 RUNX1 JASPAR yes 72650800
chr2 28661608 28661625 RARA JASPAR yes 22025215
chr2 28661608 28661625 RARA JASPAR yes 72650801
chr2 28661609 28661614 GATA2 JASPAR yes 22025216
chr2 28661609 28661614 GATA2 JASPAR yes 72650802
chr2 28661616 28661629 NR2F1 JASPAR yes 22025217
chr2 28661616 28661629 NR2F1 JASPAR yes 72650803
chr2 28661618 28661626 NR4A2 JASPAR yes 22025218
chr2 28661618 28661626 NR4A2 JASPAR yes 72650804
chr2 28661620 28661624 ESR1 TRANSFAC yes 22025219
chr2 28661620 28661624 ESR1 TRANSFAC yes 72650805
SNP sites on vista30837[chr2:28661421-28661637]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28661464 rs2972053 T G no 5608907
chr2 28661478 rs114108325 G A no 5608908
chr2 28661494 rs144273178 T C
SPIB
5608909
chr2 28661522 rs77438958 G A no 5608910
chr2 28661529 rs191602172 C T no 5608911
chr2 28661593 rs114713555 A G
RUNX1 RUNX2
5608912
Genes possibly regulated by vista30837[chr2:28661421-28661637]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28615315 28640179 + FOSL2 ENSG00000075426.7 28615315 0.77 1.0 2240 53894
chr2 28680012 28866654 + PLB1 ENSG00000163803.8 28680012 0.79 0.99 2241 81625
Expression level of Genes
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miRNAs possibly regulated by vista30837[chr2:28661421-28661637]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results