EnhancerDB
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  3. vista30838[chr2:28667907-28668105]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30838[chr2:28667907-28668105]
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Tissue distribution of vista30838
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Transcription factor that possibly regulate vista30838[chr2:28667907-28668105]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28667916 28667923 SPIB JASPAR yes 22025220
chr2 28667916 28667923 SPIB JASPAR yes 72651123
chr2 28667931 28667938 SPIB JASPAR yes 22025221
chr2 28667931 28667938 SPIB JASPAR yes 72651124
chr2 28667936 28667940 NFE TRANSFAC yes 22025222
chr2 28667936 28667940 NFE TRANSFAC yes 72651125
chr2 28667973 28667979 ATF1 TRANSFAC yes 22025223
chr2 28667973 28667979 ATF1 TRANSFAC yes 72651126
chr2 28667976 28667991 LEF1 JASPAR yes 22025224
chr2 28667976 28667991 LEF1 JASPAR yes 72651127
chr2 28667977 28667991 TCF7L2 JASPAR yes 22025225
chr2 28667977 28667991 TCF7L2 JASPAR yes 72651128
chr2 28667977 28667992 PRDM1 JASPAR yes 22025226
chr2 28667977 28667992 PRDM1 JASPAR yes 72651129
chr2 28668000 28668017 NR3C2 JASPAR yes 22025227
chr2 28668000 28668017 NR3C2 JASPAR yes 72651130
chr2 28668002 28668017 AR JASPAR yes 22025228
chr2 28668002 28668017 AR JASPAR yes 72651131
chr2 28668041 28668054 NFKB1 JASPAR yes 22025229
chr2 28668041 28668054 NFKB2 JASPAR yes 22025230
chr2 28668041 28668054 NFKB1 JASPAR yes 72651132
chr2 28668041 28668054 NFKB2 JASPAR yes 72651133
chr2 28668043 28668053 NFKB1 JASPAR yes 22025231
chr2 28668043 28668053 REL JASPAR yes 22025232
chr2 28668043 28668053 NFKB1 JASPAR yes 72651134
chr2 28668043 28668053 REL JASPAR yes 72651135
chr2 28668073 28668077 YY1 TRANSFAC yes 22025233
chr2 28668073 28668077 YY1 TRANSFAC yes 72651136
chr2 28668078 28668083 ETS2 TRANSFAC yes 22025234
chr2 28668078 28668083 ETS2 TRANSFAC yes 72651137
chr2 28668105 28668109 NFE TRANSFAC yes 22025235
chr2 28668105 28668109 NFE TRANSFAC yes 72651138
SNP sites on vista30838[chr2:28667907-28668105]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28667941 rs116061994 C T no 5608942
chr2 28667976 rs554027774 C A,G
ATF1 LEF1
5608943
chr2 28668004 rs555349162 G A
AR NR3C2
5608944
chr2 28668069 rs143741777 G C no 5608945
Genes possibly regulated by vista30838[chr2:28667907-28668105]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28615315 28640179 + FOSL2 ENSG00000075426.7 28615315 0.77 1.0 2240 47408
chr2 28680012 28866654 + PLB1 ENSG00000163803.8 28680012 0.79 0.99 2241 88093
Expression level of Genes
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miRNAs possibly regulated by vista30838[chr2:28667907-28668105]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results