EnhancerDB
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  3. vista3084[chr1:117363043-117363386]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3084[chr1:117363043-117363386]
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Tissue distribution of vista3084
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Transcription factor that possibly regulate vista3084[chr1:117363043-117363386]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 117363044 117363048 LFA1 TRANSFAC yes 31840674
chr1 117363044 117363048 LFA1 TRANSFAC yes 118357958
chr1 117363052 117363056 YY1 TRANSFAC yes 31840675
chr1 117363052 117363056 YY1 TRANSFAC yes 118357959
chr1 117363062 117363070 MEIS3 JASPAR yes 31840676
chr1 117363062 117363070 MEIS3 JASPAR yes 118357960
chr1 117363063 117363067 NFE TRANSFAC yes 31840677
chr1 117363063 117363067 NFE TRANSFAC yes 118357961
chr1 117363079 117363092 EOMES JASPAR yes 31840678
chr1 117363079 117363092 EOMES JASPAR yes 118357962
chr1 117363081 117363091 TBR1 JASPAR yes 31840679
chr1 117363081 117363091 TBR1 JASPAR yes 118357963
chr1 117363081 117363092 TBX20 JASPAR yes 31840680
chr1 117363081 117363092 TBX2 JASPAR yes 31840681
chr1 117363081 117363092 TBX20 JASPAR yes 118357964
chr1 117363081 117363092 TBX2 JASPAR yes 118357965
chr1 117363082 117363092 TBX21 JASPAR yes 31840682
chr1 117363082 117363092 TBX21 JASPAR yes 118357966
chr1 117363083 117363091 MGA JASPAR yes 31840683
chr1 117363083 117363091 TBX15 JASPAR yes 31840684
chr1 117363083 117363091 TBX1 JASPAR yes 31840685
chr1 117363083 117363091 TBX4 JASPAR yes 31840686
chr1 117363083 117363091 TBX5 JASPAR yes 31840687
chr1 117363083 117363091 MGA JASPAR yes 118357967
chr1 117363083 117363091 TBX15 JASPAR yes 118357968
chr1 117363083 117363091 TBX1 JASPAR yes 118357969
chr1 117363083 117363091 TBX4 JASPAR yes 118357970
chr1 117363083 117363091 TBX5 JASPAR yes 118357971
chr1 117363089 117363093 NFE TRANSFAC yes 31840688
chr1 117363089 117363093 NFE TRANSFAC yes 118357972
chr1 117363090 117363095 GATA2 JASPAR yes 31840689
chr1 117363090 117363095 GATA2 JASPAR yes 118357973
chr1 117363113 117363118 MYB TRANSFAC yes 31840690
chr1 117363113 117363118 MYB TRANSFAC yes 118357974
chr1 117363147 117363159 PKNOX1 JASPAR yes 31840691
chr1 117363147 117363159 PKNOX2 JASPAR yes 31840692
chr1 117363147 117363159 TGIF1 JASPAR yes 31840693
chr1 117363147 117363159 TGIF2 JASPAR yes 31840694
chr1 117363147 117363159 PKNOX1 JASPAR yes 118357975
chr1 117363147 117363159 PKNOX2 JASPAR yes 118357976
chr1 117363147 117363159 TGIF1 JASPAR yes 118357977
chr1 117363147 117363159 TGIF2 JASPAR yes 118357978
chr1 117363148 117363158 ID4 JASPAR yes 31840695
chr1 117363148 117363158 TCF4 JASPAR yes 31840696
chr1 117363148 117363158 ID4 JASPAR yes 118357979
chr1 117363148 117363158 TCF4 JASPAR yes 118357980
chr1 117363150 117363155 USF2 TRANSFAC yes 31840697
chr1 117363150 117363155 USF2 TRANSFAC yes 118357981
chr1 117363167 117363185 ESR1 JASPAR yes 31840698
chr1 117363167 117363185 ESR1 JASPAR yes 118357982
chr1 117363198 117363211 SMAD2 JASPAR yes 31840699
chr1 117363198 117363211 SMAD2 JASPAR yes 118357983
chr1 117363202 117363216 TLX1 JASPAR yes 31840700
chr1 117363202 117363216 TLX1 JASPAR yes 118357984
chr1 117363203 117363217 TLX1 JASPAR yes 31840701
chr1 117363203 117363217 TLX1 JASPAR yes 118357985
chr1 117363256 117363260 YY1 TRANSFAC yes 31840702
chr1 117363256 117363260 YY1 TRANSFAC yes 118357986
chr1 117363272 117363278 ATF1 TRANSFAC yes 31840703
chr1 117363272 117363278 ATF1 TRANSFAC yes 118357987
chr1 117363272 117363279 XBP1 TRANSFAC yes 31840704
chr1 117363272 117363279 XBP1 TRANSFAC yes 118357988
chr1 117363289 117363293 H4TF2 TRANSFAC yes 31840705
chr1 117363289 117363293 H4TF2 TRANSFAC yes 118357989
chr1 117363299 117363315 SOX4 JASPAR yes 31840706
chr1 117363299 117363315 SOX8 JASPAR yes 31840707
chr1 117363299 117363315 SOX4 JASPAR yes 118357990
chr1 117363299 117363315 SOX8 JASPAR yes 118357991
chr1 117363326 117363335 THAP1 JASPAR yes 31840708
chr1 117363326 117363335 THAP1 JASPAR yes 118357992
chr1 117363358 117363373 ESR2 JASPAR yes 31840709
chr1 117363358 117363373 ESR2 JASPAR yes 118357993
chr1 117363372 117363380 FOXO3 JASPAR yes 31840710
chr1 117363372 117363380 FOXO3 JASPAR yes 118357994
chr1 117363380 117363384 YY1 TRANSFAC yes 31840711
chr1 117363380 117363384 YY1 TRANSFAC yes 118357995
SNP sites on vista3084[chr1:117363043-117363386]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 117363081 rs139703819 T TA
EOMES TBR1 TBX2 TBX20
591721
chr1 117363090 rs79962944 C T
EOMES GATA2 MGA NFE TBR1 TBX1 TBX15 TBX2 TBX20 TBX21 TBX4 TBX5
591722
chr1 117363231 rs569113983 C A,G no 591723
chr1 117363253 rs143377274 C T no 591724
chr1 117363282 rs568063367 T C no 591725
chr1 117363320 rs75356436 C A no 591726
chr1 117363323 rs76265873 A G no 591727
Genes possibly regulated by vista3084[chr1:117363043-117363386]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 117297007 117311850 + CD2 ENSG00000116824.4 117297007 0.94 1.0 1064 33964
chr1 117452679 117532980 + PTGFRN ENSG00000134247.9 117452679 0.83 1.0 1065 10707
Expression level of Genes
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miRNAs possibly regulated by vista3084[chr1:117363043-117363386]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results