EnhancerDB
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  3. vista30841[chr2:28686781-28687104]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30841[chr2:28686781-28687104]
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Tissue distribution of vista30841
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Transcription factor that possibly regulate vista30841[chr2:28686781-28687104]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28686775 28686790 HNF1A JASPAR yes 22025277
chr2 28686775 28686790 HNF1A JASPAR yes 72652072
chr2 28686776 28686789 HNF1B JASPAR yes 22025278
chr2 28686776 28686789 HNF1B JASPAR yes 72652073
chr2 28686780 28686790 BARHL2 JASPAR yes 22025279
chr2 28686780 28686790 BARHL2 JASPAR yes 72652074
chr2 28686782 28686786 YY1 TRANSFAC yes 22025280
chr2 28686782 28686786 YY1 TRANSFAC yes 72652075
chr2 28686785 28686797 HNF1B JASPAR yes 22025281
chr2 28686785 28686797 HNF1B JASPAR yes 72652076
chr2 28686786 28686789 MYB TRANSFAC yes 22025282
chr2 28686786 28686789 MYB TRANSFAC yes 72652077
chr2 28686789 28686793 YY1 TRANSFAC yes 22025283
chr2 28686789 28686793 YY1 TRANSFAC yes 72652078
chr2 28686792 28686799 MEIS1 JASPAR yes 22025284
chr2 28686792 28686799 MEIS1 JASPAR yes 72652079
chr2 28686792 28686800 MEIS2 JASPAR yes 22025285
chr2 28686792 28686800 MEIS3 JASPAR yes 22025286
chr2 28686792 28686800 MEIS2 JASPAR yes 72652080
chr2 28686792 28686800 MEIS3 JASPAR yes 72652081
chr2 28686813 28686824 NFE2 JASPAR yes 22025287
chr2 28686813 28686824 NFE2 JASPAR yes 72652082
chr2 28686814 28686823 JDP2 JASPAR yes 22025288
chr2 28686814 28686823 JDP2 JASPAR yes 72652083
chr2 28686874 28686878 H4TF2 TRANSFAC yes 22025289
chr2 28686874 28686878 H4TF2 TRANSFAC yes 72652084
chr2 28686876 28686897 REST JASPAR yes 22025290
chr2 28686876 28686897 REST JASPAR yes 72652085
chr2 28686877 28686896 REST JASPAR yes 22025291
chr2 28686877 28686896 REST JASPAR yes 72652086
chr2 28686899 28686914 FOXA1 JASPAR yes 22025292
chr2 28686899 28686914 FOXA1 JASPAR yes 72652087
chr2 28686900 28686915 FOXP1 JASPAR yes 22025293
chr2 28686900 28686915 FOXP1 JASPAR yes 72652088
chr2 28686901 28686912 FOXP2 JASPAR yes 22025294
chr2 28686901 28686912 FOXP2 JASPAR yes 72652089
chr2 28686901 28686913 FOXC2 JASPAR yes 22025295
chr2 28686901 28686913 FOXC2 JASPAR yes 72652090
chr2 28686902 28686910 FOXD1 JASPAR yes 22025296
chr2 28686902 28686910 FOXG1 JASPAR yes 22025297
chr2 28686902 28686910 FOXO3 JASPAR yes 22025298
chr2 28686902 28686910 FOXD1 JASPAR yes 72652091
chr2 28686902 28686910 FOXG1 JASPAR yes 72652092
chr2 28686902 28686910 FOXO3 JASPAR yes 72652093
chr2 28686902 28686913 FOXB1 JASPAR yes 22025299
chr2 28686902 28686913 FOXC1 JASPAR yes 22025300
chr2 28686902 28686913 FOXB1 JASPAR yes 72652094
chr2 28686902 28686913 FOXC1 JASPAR yes 72652095
chr2 28686903 28686910 FOXD2 JASPAR yes 22025301
chr2 28686903 28686910 FOXI1 JASPAR yes 22025302
chr2 28686903 28686910 FOXL1 JASPAR yes 22025303
chr2 28686903 28686910 FOXO4 JASPAR yes 22025304
chr2 28686903 28686910 FOXO6 JASPAR yes 22025305
chr2 28686903 28686910 FOXP3 JASPAR yes 22025306
chr2 28686903 28686910 FOXD2 JASPAR yes 72652096
chr2 28686903 28686910 FOXI1 JASPAR yes 72652097
chr2 28686903 28686910 FOXL1 JASPAR yes 72652098
chr2 28686903 28686910 FOXO4 JASPAR yes 72652099
chr2 28686903 28686910 FOXO6 JASPAR yes 72652100
chr2 28686903 28686910 FOXP3 JASPAR yes 72652101
chr2 28686903 28686911 FOXO3 JASPAR yes 22025307
chr2 28686903 28686911 FOXO3 JASPAR yes 72652102
chr2 28686903 28686914 FOXA1 JASPAR yes 22025308
chr2 28686903 28686914 FOXA1 JASPAR yes 72652103
chr2 28686910 28686921 GCM1 JASPAR yes 22025309
chr2 28686910 28686921 GCM1 JASPAR yes 72652104
chr2 28686918 28686932 SPIC JASPAR yes 22025310
chr2 28686918 28686932 SPIC JASPAR yes 72652105
chr2 28686931 28686943 TEAD1 JASPAR yes 22025311
chr2 28686931 28686943 TEAD1 JASPAR yes 72652106
chr2 28686935 28686949 POU1F1 JASPAR yes 22025312
chr2 28686935 28686949 POU1F1 JASPAR yes 72652107
chr2 28686956 28686960 LFA1 TRANSFAC yes 22025313
chr2 28686956 28686960 LFA1 TRANSFAC yes 72652108
chr2 28686965 28686979 SPIC JASPAR yes 22025314
chr2 28686965 28686979 SPIC JASPAR yes 72652109
chr2 28686969 28686976 SPIB JASPAR yes 22025315
chr2 28686969 28686976 SPIB JASPAR yes 72652110
chr2 28686972 28686982 RELA JASPAR yes 22025316
chr2 28686972 28686982 RELA JASPAR yes 72652111
chr2 28686974 28686989 RUNX2 JASPAR yes 22025317
chr2 28686974 28686989 RUNX2 JASPAR yes 72652112
chr2 28686975 28686984 RUNX2 JASPAR yes 22025318
chr2 28686975 28686984 RUNX2 JASPAR yes 72652113
chr2 28686975 28686985 RUNX3 JASPAR yes 22025319
chr2 28686975 28686985 RUNX3 JASPAR yes 72652114
chr2 28686975 28686986 RUNX1 JASPAR yes 22025320
chr2 28686975 28686986 RUNX1 JASPAR yes 72652115
chr2 28687015 28687019 YY1 TRANSFAC yes 22025321
chr2 28687015 28687019 YY1 TRANSFAC yes 72652116
chr2 28687016 28687031 MEF2C JASPAR yes 22025322
chr2 28687016 28687031 MEF2C JASPAR yes 72652117
chr2 28687026 28687041 ESR2 JASPAR yes 22025323
chr2 28687026 28687041 ESR2 JASPAR yes 72652118
chr2 28687026 28687046 ESR1 JASPAR yes 22025324
chr2 28687026 28687046 ESR1 JASPAR yes 72652119
chr2 28687066 28687073 NKX3-1 JASPAR yes 22025325
chr2 28687066 28687073 NKX3-1 JASPAR yes 72652120
chr2 28687070 28687084 GATA2 JASPAR yes 22025326
chr2 28687070 28687084 GATA2 JASPAR yes 72652121
chr2 28687072 28687080 GATA3 JASPAR yes 22025327
chr2 28687072 28687080 GATA3 JASPAR yes 72652122
chr2 28687076 28687090 TCF7L2 JASPAR yes 22025328
chr2 28687076 28687090 TCF7L2 JASPAR yes 72652123
chr2 28687076 28687091 LEF1 JASPAR yes 22025329
chr2 28687076 28687091 LEF1 JASPAR yes 72652124
chr2 28687077 28687095 RARA JASPAR yes 22025330
chr2 28687077 28687095 RARA JASPAR yes 72652125
SNP sites on vista30841[chr2:28686781-28687104]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28686848 rs113897397 C T no 5609074
chr2 28686848 rs536246565 CGTGAGT C no 5609075
chr2 28686941 rs373507202 G A
POU1F1 TEAD1
5609076
chr2 28687029 rs376480730 GAC G
ESR1 ESR2 MEF2C
5609077
chr2 28687029 rs552964841 GAC G
ESR1 ESR2 MEF2C
5609078
chr2 28687043 rs2940790 A C,T
ESR1
5609079
chr2 28687059 rs141121876 T C no 5609080
Genes possibly regulated by vista30841[chr2:28686781-28687104]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28615315 28640179 + FOSL2 ENSG00000075426.7 28615315 0.77 1.0 2240 28534
chr2 28680012 28866654 + PLB1 ENSG00000163803.8 28680012 0.79 0.99 2241 93231
Expression level of Genes
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miRNAs possibly regulated by vista30841[chr2:28686781-28687104]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results