EnhancerDB
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  3. vista30842[chr2:28731273-28731592]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30842[chr2:28731273-28731592]
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Tissue distribution of vista30842
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Transcription factor that possibly regulate vista30842[chr2:28731273-28731592]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28731133 28731516 BHLHE40 UCSC Txn Factor no Conserved 108431625
chr2 28731163 28731452 USF2 UCSC Txn Factor no Conserved 108431626
chr2 28731190 28731528 JUND UCSC Txn Factor no Conserved 108431627
chr2 28731195 28731507 JUN UCSC Txn Factor no Conserved 108431628
chr2 28731225 28731517 FOS UCSC Txn Factor no Conserved 108431629
chr2 28731289 28731292 MYB TRANSFAC yes 22025331
chr2 28731289 28731292 MYB TRANSFAC yes 72655447
chr2 28731309 28731319 FIGLA JASPAR yes 22025332
chr2 28731309 28731319 ID4 JASPAR yes 22025333
chr2 28731309 28731319 TCF3 JASPAR yes 22025334
chr2 28731309 28731319 TCF4 JASPAR yes 22025335
chr2 28731309 28731319 FIGLA JASPAR yes 72655448
chr2 28731309 28731319 ID4 JASPAR yes 72655449
chr2 28731309 28731319 TCF3 JASPAR yes 72655450
chr2 28731309 28731319 TCF4 JASPAR yes 72655451
chr2 28731311 28731316 USF2 TRANSFAC yes 22025336
chr2 28731311 28731316 USF2 TRANSFAC yes 72655452
chr2 28731319 28731329 HOXA13 JASPAR yes 22025337
chr2 28731319 28731329 HOXB13 JASPAR yes 22025338
chr2 28731319 28731329 HOXA13 JASPAR yes 72655453
chr2 28731319 28731329 HOXB13 JASPAR yes 72655454
chr2 28731329 28731342 SMAD2 JASPAR yes 22025339
chr2 28731329 28731342 SMAD2 JASPAR yes 72655455
chr2 28731330 28731349 PAX5 JASPAR yes 22025340
chr2 28731330 28731349 PAX5 JASPAR yes 72655456
chr2 28731333 28731350 PAX1 JASPAR yes 22025341
chr2 28731333 28731350 PAX9 JASPAR yes 22025342
chr2 28731333 28731350 PAX1 JASPAR yes 72655457
chr2 28731333 28731350 PAX9 JASPAR yes 72655458
chr2 28731339 28731353 JUN JASPAR yes 22025343
chr2 28731339 28731353 JUN JASPAR yes 72655459
chr2 28731341 28731352 BATF JASPAR yes 22025344
chr2 28731341 28731352 BATF JASPAR yes 72655460
chr2 28731342 28731353 FOSL2 JASPAR yes 22025345
chr2 28731342 28731353 JUNB JASPAR yes 22025346
chr2 28731342 28731353 FOSL2 JASPAR yes 72655461
chr2 28731342 28731353 JUNB JASPAR yes 72655462
chr2 28731343 28731354 FOS JASPAR yes 22025347
chr2 28731343 28731354 FOSL1 JASPAR yes 22025348
chr2 28731343 28731354 JUND JASPAR yes 22025349
chr2 28731343 28731354 NFE2 JASPAR yes 22025350
chr2 28731343 28731354 FOS JASPAR yes 72655463
chr2 28731343 28731354 FOSL1 JASPAR yes 72655464
chr2 28731343 28731354 JUND JASPAR yes 72655465
chr2 28731343 28731354 NFE2 JASPAR yes 72655466
chr2 28731344 28731353 JDP2 JASPAR yes 22025351
chr2 28731344 28731353 JDP2 JASPAR yes 72655467
chr2 28731344 28731355 FOSL2 JASPAR yes 22025352
chr2 28731344 28731355 JUNB JASPAR yes 22025353
chr2 28731344 28731355 FOSL2 JASPAR yes 72655468
chr2 28731344 28731355 JUNB JASPAR yes 72655469
chr2 28731344 28731358 JUN JASPAR yes 22025354
chr2 28731344 28731358 JUN JASPAR yes 72655470
chr2 28731353 28731374 MAFG JASPAR yes 22025355
chr2 28731353 28731374 MAFG JASPAR yes 72655471
chr2 28731356 28731367 BATF JASPAR yes 22025356
chr2 28731356 28731367 BATF JASPAR yes 72655472
chr2 28731358 28731369 FOS JASPAR yes 22025357
chr2 28731358 28731369 FOSL1 JASPAR yes 22025358
chr2 28731358 28731369 JUND JASPAR yes 22025359
chr2 28731358 28731369 FOS JASPAR yes 72655473
chr2 28731358 28731369 FOSL1 JASPAR yes 72655474
chr2 28731358 28731369 JUND JASPAR yes 72655475
chr2 28731358 28731376 MAFF JASPAR yes 22025360
chr2 28731358 28731376 MAFF JASPAR yes 72655476
chr2 28731359 28731370 JUNB JASPAR yes 22025361
chr2 28731359 28731370 NFE2L2 JASPAR yes 22025362
chr2 28731359 28731370 JUNB JASPAR yes 72655477
chr2 28731359 28731370 NFE2L2 JASPAR yes 72655478
chr2 28731359 28731373 JUN JASPAR yes 22025363
chr2 28731359 28731373 JUN JASPAR yes 72655479
chr2 28731359 28731374 MAFK JASPAR yes 22025364
chr2 28731359 28731374 MAFK JASPAR yes 72655480
chr2 28731360 28731371 BATF JASPAR yes 22025365
chr2 28731360 28731371 BATF JASPAR yes 72655481
chr2 28731379 28731390 USF1 JASPAR yes 22025366
chr2 28731379 28731390 USF2 JASPAR yes 22025367
chr2 28731379 28731390 USF1 JASPAR yes 72655482
chr2 28731379 28731390 USF2 JASPAR yes 72655483
chr2 28731388 28731400 NHLH1 JASPAR yes 22025368
chr2 28731388 28731400 NHLH1 JASPAR yes 72655484
chr2 28731389 28731399 ID4 JASPAR yes 22025369
chr2 28731389 28731399 NHLH1 JASPAR yes 22025370
chr2 28731389 28731399 TCF3 JASPAR yes 22025371
chr2 28731389 28731399 TCF4 JASPAR yes 22025372
chr2 28731389 28731399 ID4 JASPAR yes 72655485
chr2 28731389 28731399 NHLH1 JASPAR yes 72655486
chr2 28731389 28731399 TCF3 JASPAR yes 72655487
chr2 28731389 28731399 TCF4 JASPAR yes 72655488
chr2 28731390 28731399 SNAI2 JASPAR yes 22025373
chr2 28731390 28731399 SNAI2 JASPAR yes 72655489
chr2 28731391 28731396 USF2 TRANSFAC yes 22025374
chr2 28731391 28731396 USF2 TRANSFAC yes 72655490
chr2 28731403 28731407 H4TF2 TRANSFAC yes 22025375
chr2 28731403 28731407 H4TF2 TRANSFAC yes 72655491
chr2 28731432 28731436 ESR1 TRANSFAC yes 22025376
chr2 28731432 28731436 ESR1 TRANSFAC yes 72655492
chr2 28731443 28731451 MEIS2 JASPAR yes 22025377
chr2 28731443 28731451 MEIS3 JASPAR yes 22025378
chr2 28731443 28731451 MEIS2 JASPAR yes 72655493
chr2 28731443 28731451 MEIS3 JASPAR yes 72655494
chr2 28731444 28731456 PKNOX1 JASPAR yes 22025379
chr2 28731444 28731456 TGIF1 JASPAR yes 22025380
chr2 28731444 28731456 TGIF2 JASPAR yes 22025381
chr2 28731444 28731456 PKNOX1 JASPAR yes 72655495
chr2 28731444 28731456 TGIF1 JASPAR yes 72655496
chr2 28731444 28731456 TGIF2 JASPAR yes 72655497
chr2 28731493 28731507 GATA2 JASPAR yes 22025382
chr2 28731493 28731507 GATA2 JASPAR yes 72655498
chr2 28731499 28731511 PBX1 JASPAR yes 22025383
chr2 28731499 28731511 PBX1 JASPAR yes 72655499
chr2 28731508 28731523 RUNX2 JASPAR yes 22025384
chr2 28731508 28731523 RUNX2 JASPAR yes 72655500
chr2 28731509 28731518 RUNX2 JASPAR yes 22025385
chr2 28731509 28731518 RUNX2 JASPAR yes 72655501
chr2 28731509 28731519 RUNX3 JASPAR yes 22025386
chr2 28731509 28731519 RUNX3 JASPAR yes 72655502
chr2 28731590 28731602 GLI2 JASPAR yes 22025387
chr2 28731590 28731602 GLI2 JASPAR yes 72655503
SNP sites on vista30842[chr2:28731273-28731592]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28731302 rs80062726 C A,T
BHLHE40 FOS JUN JUND USF2
5609364
chr2 28731510 rs563676520 A G
BHLHE40 FOS JUND PBX1 RUNX2 RUNX3
5609365
chr2 28731563 rs72860567 C T no 5609366
Genes possibly regulated by vista30842[chr2:28731273-28731592]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28680012 28866654 + PLB1 ENSG00000163803.8 28680012 0.79 0.99 2241 48739
Expression level of Genes
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miRNAs possibly regulated by vista30842[chr2:28731273-28731592]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results