EnhancerDB
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  3. vista30852[chr2:28856660-28856889]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30852[chr2:28856660-28856889]
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Tissue distribution of vista30852
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Transcription factor that possibly regulate vista30852[chr2:28856660-28856889]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28856695 28857101 NR3C1 UCSC Txn Factor no Conserved 108431645
chr2 28856735 28857054 FOXA1 UCSC Txn Factor no Conserved 108431646
chr2 28856672 28856676 H1TF2 TRANSFAC yes 22025858
chr2 28856672 28856676 NFE TRANSFAC yes 22025859
chr2 28856672 28856676 SRF TRANSFAC yes 22025860
chr2 28856672 28856676 H1TF2 TRANSFAC yes 72661793
chr2 28856672 28856676 NFE TRANSFAC yes 72661794
chr2 28856672 28856676 SRF TRANSFAC yes 72661795
chr2 28856685 28856693 RHOXF1 JASPAR yes 22025861
chr2 28856685 28856693 RHOXF1 JASPAR yes 72661796
chr2 28856696 28856708 HNF1B JASPAR yes 22025862
chr2 28856696 28856708 HNF1B JASPAR yes 72661797
chr2 28856704 28856707 MYB TRANSFAC yes 22025863
chr2 28856704 28856707 MYB TRANSFAC yes 72661798
chr2 28856706 28856726 RREB1 JASPAR yes 22025864
chr2 28856706 28856726 RREB1 JASPAR yes 72661799
chr2 28856712 28856718 MZF1 JASPAR yes 22025865
chr2 28856712 28856718 MZF1 JASPAR yes 72661800
chr2 28856722 28856737 AR JASPAR yes 22025866
chr2 28856722 28856737 AR JASPAR yes 72661801
chr2 28856730 28856741 E2F6 JASPAR yes 22025867
chr2 28856730 28856741 E2F6 JASPAR yes 72661802
chr2 28856739 28856745 SOX10 JASPAR yes 22025868
chr2 28856739 28856745 SOX10 JASPAR yes 72661803
chr2 28856753 28856765 FOXI1 JASPAR yes 22025869
chr2 28856753 28856765 FOXI1 JASPAR yes 72661804
chr2 28856765 28856775 TEAD1 JASPAR yes 22025870
chr2 28856765 28856775 TEAD4 JASPAR yes 22025871
chr2 28856765 28856775 TEAD1 JASPAR yes 72661805
chr2 28856765 28856775 TEAD4 JASPAR yes 72661806
chr2 28856765 28856777 TEAD1 JASPAR yes 22025872
chr2 28856765 28856777 TEAD1 JASPAR yes 72661807
chr2 28856766 28856774 TEAD3 JASPAR yes 22025873
chr2 28856766 28856774 TEAD3 JASPAR yes 72661808
chr2 28856810 28856816 NFIC JASPAR yes 22025874
chr2 28856810 28856816 NFIC JASPAR yes 72661809
chr2 28856811 28856823 ZBTB7A JASPAR yes 22025875
chr2 28856811 28856823 ZBTB7A JASPAR yes 72661810
chr2 28856812 28856824 ZBTB7B JASPAR yes 22025876
chr2 28856812 28856824 ZBTB7C JASPAR yes 22025877
chr2 28856812 28856824 ZBTB7B JASPAR yes 72661811
chr2 28856812 28856824 ZBTB7C JASPAR yes 72661812
chr2 28856823 28856837 MTF1 JASPAR yes 22025878
chr2 28856823 28856837 MTF1 JASPAR yes 72661813
chr2 28856831 28856842 E2F6 JASPAR yes 22025879
chr2 28856831 28856842 E2F6 JASPAR yes 72661814
chr2 28856842 28856846 NFE TRANSFAC yes 22025880
chr2 28856842 28856846 NFE TRANSFAC yes 72661815
chr2 28856844 28856854 SREBF1 JASPAR yes 22025881
chr2 28856844 28856854 SREBF2 JASPAR yes 22025882
chr2 28856844 28856854 SREBF1 JASPAR yes 72661816
chr2 28856844 28856854 SREBF2 JASPAR yes 72661817
chr2 28856868 28856887 PAX5 JASPAR yes 22025883
chr2 28856868 28856887 PAX5 JASPAR yes 72661818
chr2 28856877 28856888 FOSL2 JASPAR yes 22025884
chr2 28856877 28856888 JUNB JASPAR yes 22025885
chr2 28856877 28856888 NFE2L2 JASPAR yes 22025886
chr2 28856877 28856888 FOSL2 JASPAR yes 72661819
chr2 28856877 28856888 JUNB JASPAR yes 72661820
chr2 28856877 28856888 NFE2L2 JASPAR yes 72661821
chr2 28856878 28856889 FOS JASPAR yes 22025887
chr2 28856878 28856889 FOSL1 JASPAR yes 22025888
chr2 28856878 28856889 JUND JASPAR yes 22025889
chr2 28856878 28856889 FOS JASPAR yes 72661822
chr2 28856878 28856889 FOSL1 JASPAR yes 72661823
chr2 28856878 28856889 JUND JASPAR yes 72661824
chr2 28856879 28856890 FOSL2 JASPAR yes 22025890
chr2 28856879 28856890 JUNB JASPAR yes 22025891
chr2 28856879 28856890 FOSL2 JASPAR yes 72661825
chr2 28856879 28856890 JUNB JASPAR yes 72661826
chr2 28856879 28856893 JUN JASPAR yes 22025892
chr2 28856879 28856893 JUN JASPAR yes 72661827
chr2 28856888 28856900 FOXC2 JASPAR yes 22025893
chr2 28856888 28856900 FOXC2 JASPAR yes 72661828
chr2 28856888 28856902 ONECUT1 JASPAR yes 22025894
chr2 28856888 28856902 ONECUT2 JASPAR yes 22025895
chr2 28856888 28856902 ONECUT3 JASPAR yes 22025896
chr2 28856888 28856902 ONECUT1 JASPAR yes 72661829
chr2 28856888 28856902 ONECUT2 JASPAR yes 72661830
chr2 28856888 28856902 ONECUT3 JASPAR yes 72661831
chr2 28856889 28856900 FOXB1 JASPAR yes 22025897
chr2 28856889 28856900 FOXC1 JASPAR yes 22025898
chr2 28856889 28856900 FOXB1 JASPAR yes 72661832
chr2 28856889 28856900 FOXC1 JASPAR yes 72661833
SNP sites on vista30852[chr2:28856660-28856889]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28856783 rs149017161 T C
FOXA1 NR3C1
5610153
chr2 28856795 rs143808766 A G
FOXA1 NR3C1
5610154
chr2 28856800 rs138498145 C T
FOXA1 NR3C1
5610155
chr2 28856801 rs6719289 A G
FOXA1 NR3C1
5610156
chr2 28856878 rs77038731 G A,T
FOS FOSL1 FOSL2 FOXA1 JUNB JUND NFE2L2 NR3C1 PAX5
5610157
Genes possibly regulated by vista30852[chr2:28856660-28856889]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista30852[chr2:28856660-28856889]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results