EnhancerDB
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  3. vista30854[chr2:28903940-28904347]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30854[chr2:28903940-28904347]
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Tissue distribution of vista30854
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Transcription factor that possibly regulate vista30854[chr2:28903940-28904347]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28904062 28904482 RELA UCSC Txn Factor no Conserved 108431648
chr2 28903941 28903945 H4TF2 TRANSFAC yes 22025926
chr2 28903941 28903945 H4TF2 TRANSFAC yes 72668244
chr2 28903960 28903971 NFKB1 JASPAR yes 22025927
chr2 28903960 28903971 NFKB1 JASPAR yes 72668245
chr2 28903982 28903997 STAT1 JASPAR yes 22025928
chr2 28903982 28903997 STAT1 JASPAR yes 72668246
chr2 28903982 28904000 SRF JASPAR yes 22025929
chr2 28903982 28904000 SRF JASPAR yes 72668247
chr2 28903984 28903995 STAT1 JASPAR yes 22025930
chr2 28903984 28903995 STAT3 JASPAR yes 22025931
chr2 28903984 28903995 STAT1 JASPAR yes 72668248
chr2 28903984 28903995 STAT3 JASPAR yes 72668249
chr2 28903989 28904003 STAT1 JASPAR yes 22025932
chr2 28903989 28904003 STAT1 JASPAR yes 72668250
chr2 28903989 28904004 STAT2 JASPAR yes 22025933
chr2 28903989 28904004 STAT2 JASPAR yes 72668251
chr2 28903992 28904013 ZNF263 JASPAR yes 22025934
chr2 28903992 28904013 ZNF263 JASPAR yes 72668252
chr2 28903993 28903998 ETS2 TRANSFAC yes 22025935
chr2 28903993 28903998 ETS2 TRANSFAC yes 72668253
chr2 28904004 28904018 TCF7L2 JASPAR yes 22025936
chr2 28904004 28904018 TCF7L2 JASPAR yes 72668254
chr2 28904011 28904026 RUNX2 JASPAR yes 22025937
chr2 28904011 28904026 RUNX2 JASPAR yes 72668255
chr2 28904012 28904021 RUNX2 JASPAR yes 22025938
chr2 28904012 28904021 RUNX2 JASPAR yes 72668256
chr2 28904012 28904022 RUNX3 JASPAR yes 22025939
chr2 28904012 28904022 RUNX3 JASPAR yes 72668257
chr2 28904012 28904023 RUNX1 JASPAR yes 22025940
chr2 28904012 28904023 RUNX1 JASPAR yes 72668258
chr2 28904018 28904023 MYC TRANSFAC yes 22025941
chr2 28904018 28904023 MYC TRANSFAC yes 72668259
chr2 28904070 28904083 DUXA JASPAR yes 22025942
chr2 28904070 28904083 DUXA JASPAR yes 72668260
chr2 28904074 28904083 PITX3 JASPAR yes 22025943
chr2 28904074 28904083 PITX3 JASPAR yes 72668261
chr2 28904074 28904084 GSC2 JASPAR yes 22025944
chr2 28904074 28904084 GSC JASPAR yes 22025945
chr2 28904074 28904084 GSC2 JASPAR yes 72668262
chr2 28904074 28904084 GSC JASPAR yes 72668263
chr2 28904075 28904083 OTX1 JASPAR yes 22025946
chr2 28904075 28904083 OTX1 JASPAR yes 72668264
chr2 28904095 28904105 NKX2-3 JASPAR yes 22025947
chr2 28904095 28904105 NKX2-3 JASPAR yes 72668265
chr2 28904102 28904119 ZNF410 JASPAR yes 22025948
chr2 28904102 28904119 ZNF410 JASPAR yes 72668266
chr2 28904114 28904132 SRF JASPAR yes 22025949
chr2 28904114 28904132 SRF JASPAR yes 72668267
chr2 28904116 28904128 MEF2B JASPAR yes 22025950
chr2 28904116 28904128 MEF2D JASPAR yes 22025951
chr2 28904116 28904128 MEF2B JASPAR yes 72668268
chr2 28904116 28904128 MEF2D JASPAR yes 72668269
chr2 28904118 28904122 YY1 TRANSFAC yes 22025952
chr2 28904118 28904122 YY1 TRANSFAC yes 72668270
chr2 28904139 28904151 INSM1 JASPAR yes 22025953
chr2 28904139 28904151 INSM1 JASPAR yes 72668271
chr2 28904146 28904164 RARA JASPAR yes 22025954
chr2 28904146 28904164 RARA JASPAR yes 72668272
chr2 28904148 28904162 RORA JASPAR yes 22025955
chr2 28904148 28904162 RORA JASPAR yes 72668273
chr2 28904149 28904162 DUXA JASPAR yes 22025956
chr2 28904149 28904162 DUXA JASPAR yes 72668274
chr2 28904150 28904161 DUX4 JASPAR yes 22025957
chr2 28904150 28904161 DUX4 JASPAR yes 72668275
chr2 28904151 28904166 JUND JASPAR yes 22025958
chr2 28904151 28904166 JUND JASPAR yes 72668276
chr2 28904154 28904173 PAX5 JASPAR yes 22025959
chr2 28904154 28904173 PAX5 JASPAR yes 72668277
chr2 28904156 28904160 ESR1 TRANSFAC yes 22025960
chr2 28904156 28904160 ESR1 TRANSFAC yes 72668278
chr2 28904168 28904176 NR4A2 JASPAR yes 22025961
chr2 28904168 28904176 NR4A2 JASPAR yes 72668279
chr2 28904168 28904181 EOMES JASPAR yes 22025962
chr2 28904168 28904181 EOMES JASPAR yes 72668280
chr2 28904171 28904181 SREBF1 JASPAR yes 22025963
chr2 28904171 28904181 SREBF2 JASPAR yes 22025964
chr2 28904171 28904181 TBX21 JASPAR yes 22025965
chr2 28904171 28904181 SREBF1 JASPAR yes 72668281
chr2 28904171 28904181 SREBF2 JASPAR yes 72668282
chr2 28904171 28904181 TBX21 JASPAR yes 72668283
chr2 28904172 28904180 MGA JASPAR yes 22025966
chr2 28904172 28904180 MGA JASPAR yes 72668284
chr2 28904178 28904182 YY1 TRANSFAC yes 22025967
chr2 28904178 28904182 YY1 TRANSFAC yes 72668285
chr2 28904195 28904207 HNF1B JASPAR yes 22025968
chr2 28904195 28904207 HNF1B JASPAR yes 72668286
chr2 28904197 28904211 NR2F1 JASPAR yes 22025969
chr2 28904197 28904211 NR2F1 JASPAR yes 72668287
chr2 28904243 28904264 IRF1 JASPAR yes 22025970
chr2 28904243 28904264 IRF1 JASPAR yes 72668288
chr2 28904245 28904256 FLI1 JASPAR yes 22025971
chr2 28904245 28904256 FLI1 JASPAR yes 72668289
chr2 28904246 28904254 FEV JASPAR yes 22025972
chr2 28904246 28904254 FEV JASPAR yes 72668290
chr2 28904247 28904261 STAT1 JASPAR yes 22025973
chr2 28904247 28904261 STAT1 JASPAR yes 72668291
chr2 28904247 28904262 STAT2 JASPAR yes 22025974
chr2 28904247 28904262 STAT2 JASPAR yes 72668292
chr2 28904268 28904279 NFKB1 JASPAR yes 22025975
chr2 28904268 28904279 NFKB1 JASPAR yes 72668293
chr2 28904268 28904281 NFKB1 JASPAR yes 22025976
chr2 28904268 28904281 NFKB2 JASPAR yes 22025977
chr2 28904268 28904281 NFKB1 JASPAR yes 72668294
chr2 28904268 28904281 NFKB2 JASPAR yes 72668295
chr2 28904269 28904279 NFKB1 JASPAR yes 22025978
chr2 28904269 28904279 RELA JASPAR yes 22025979
chr2 28904269 28904279 NFKB1 JASPAR yes 72668296
chr2 28904269 28904279 RELA JASPAR yes 72668297
chr2 28904269 28904280 NFKB1 JASPAR yes 22025980
chr2 28904269 28904280 NFKB1 JASPAR yes 72668298
chr2 28904270 28904280 NFKB1 JASPAR yes 22025981
chr2 28904270 28904280 RELA JASPAR yes 22025982
chr2 28904270 28904280 REL JASPAR yes 22025983
chr2 28904270 28904280 NFKB1 JASPAR yes 72668299
chr2 28904270 28904280 RELA JASPAR yes 72668300
chr2 28904270 28904280 REL JASPAR yes 72668301
chr2 28904275 28904281 MZF1 JASPAR yes 22025984
chr2 28904275 28904281 MZF1 JASPAR yes 72668302
chr2 28904280 28904285 SP1 TRANSFAC yes 22025985
chr2 28904280 28904285 SP1 TRANSFAC yes 72668303
chr2 28904291 28904312 REST JASPAR yes 22025986
chr2 28904291 28904312 REST JASPAR yes 72668304
chr2 28904292 28904311 REST JASPAR yes 22025987
chr2 28904292 28904311 REST JASPAR yes 72668305
chr2 28904297 28904312 RFX5 JASPAR yes 22025988
chr2 28904297 28904312 RFX5 JASPAR yes 72668306
chr2 28904311 28904326 TFAP2A JASPAR yes 22025989
chr2 28904311 28904326 TFAP2A JASPAR yes 72668307
chr2 28904314 28904326 INSM1 JASPAR yes 22025990
chr2 28904314 28904326 INSM1 JASPAR yes 72668308
chr2 28904319 28904337 ESR1 JASPAR yes 22025991
chr2 28904319 28904337 ESR1 JASPAR yes 72668309
chr2 28904320 28904335 ESR2 JASPAR yes 22025992
chr2 28904320 28904335 ESR2 JASPAR yes 72668310
chr2 28904320 28904340 ESR1 JASPAR yes 22025993
chr2 28904320 28904340 ESR1 JASPAR yes 72668311
chr2 28904321 28904325 ESR1 TRANSFAC yes 22025994
chr2 28904321 28904325 ESR1 TRANSFAC yes 72668312
SNP sites on vista30854[chr2:28903940-28904347]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28903957 rs576213292 T C no 5610811
chr2 28903971 rs537093574 T G
NFKB1
5610812
chr2 28904145 rs58217813 G A,T
INSM1 RELA
5610813
chr2 28904212 rs572694637 C T
RELA
5610814
chr2 28904226 rs371722171 G A
RELA
5610815
chr2 28904245 rs56727310 C A
FLI1 IRF1 RELA
5610816
chr2 28904282 rs78702541 C T
RELA SP1
5610817
Genes possibly regulated by vista30854[chr2:28903940-28904347]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28974506 29025806 + PPP1CB ENSG00000213639.5 28974506 0.77 0.98 2242 29841
Expression level of Genes
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miRNAs possibly regulated by vista30854[chr2:28903940-28904347]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results