EnhancerDB
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  3. vista30855[chr2:28936560-28936756]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30855[chr2:28936560-28936756]
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Tissue distribution of vista30855
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Transcription factor that possibly regulate vista30855[chr2:28936560-28936756]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28936596 28936604 TBX15 JASPAR yes 22025995
chr2 28936596 28936604 TBX1 JASPAR yes 22025996
chr2 28936596 28936604 TBX4 JASPAR yes 22025997
chr2 28936596 28936604 TBX5 JASPAR yes 22025998
chr2 28936596 28936604 TBX15 JASPAR yes 72672619
chr2 28936596 28936604 TBX1 JASPAR yes 72672620
chr2 28936596 28936604 TBX4 JASPAR yes 72672621
chr2 28936596 28936604 TBX5 JASPAR yes 72672622
chr2 28936635 28936645 POU6F2 JASPAR yes 22025999
chr2 28936635 28936645 POU6F2 JASPAR yes 72672623
chr2 28936639 28936643 YY1 TRANSFAC yes 22026000
chr2 28936639 28936643 YY1 TRANSFAC yes 72672624
chr2 28936649 28936652 MYB TRANSFAC yes 22026001
chr2 28936649 28936652 MYB TRANSFAC yes 72672625
chr2 28936664 28936679 FOXA1 JASPAR yes 22026002
chr2 28936664 28936679 FOXA1 JASPAR yes 72672626
chr2 28936664 28936685 MAFG JASPAR yes 22026003
chr2 28936664 28936685 MAFG JASPAR yes 72672627
chr2 28936667 28936678 BATF JASPAR yes 22026004
chr2 28936667 28936678 FOXB1 JASPAR yes 22026005
chr2 28936667 28936678 FOXC1 JASPAR yes 22026006
chr2 28936667 28936678 BATF JASPAR yes 72672628
chr2 28936667 28936678 FOXB1 JASPAR yes 72672629
chr2 28936667 28936678 FOXC1 JASPAR yes 72672630
chr2 28936668 28936679 FOSL2 JASPAR yes 22026007
chr2 28936668 28936679 FOXA1 JASPAR yes 22026008
chr2 28936668 28936679 FOSL2 JASPAR yes 72672631
chr2 28936668 28936679 FOXA1 JASPAR yes 72672632
chr2 28936669 28936680 FOS JASPAR yes 22026009
chr2 28936669 28936680 FOSL1 JASPAR yes 22026010
chr2 28936669 28936680 NFE2 JASPAR yes 22026011
chr2 28936669 28936680 FOS JASPAR yes 72672633
chr2 28936669 28936680 FOSL1 JASPAR yes 72672634
chr2 28936669 28936680 NFE2 JASPAR yes 72672635
chr2 28936669 28936687 MAFF JASPAR yes 22026012
chr2 28936669 28936687 MAFF JASPAR yes 72672636
chr2 28936670 28936679 JDP2 JASPAR yes 22026013
chr2 28936670 28936679 JDP2 JASPAR yes 72672637
chr2 28936670 28936681 JUNB JASPAR yes 22026014
chr2 28936670 28936681 JUNB JASPAR yes 72672638
chr2 28936670 28936684 JUN JASPAR yes 22026015
chr2 28936670 28936684 JUN JASPAR yes 72672639
chr2 28936670 28936685 MAFK JASPAR yes 22026016
chr2 28936670 28936685 MAFK JASPAR yes 72672640
chr2 28936671 28936682 BATF JASPAR yes 22026017
chr2 28936671 28936682 BATF JASPAR yes 72672641
chr2 28936679 28936683 YY1 TRANSFAC yes 22026018
chr2 28936679 28936683 YY1 TRANSFAC yes 72672642
chr2 28936700 28936715 MYBL2 JASPAR yes 22026019
chr2 28936700 28936715 MYBL2 JASPAR yes 72672643
chr2 28936739 28936757 NR3C1 JASPAR yes 22026020
chr2 28936739 28936757 NR3C1 JASPAR yes 72672644
SNP sites on vista30855[chr2:28936560-28936756]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28936723 rs113888873 C A no 5611156
Genes possibly regulated by vista30855[chr2:28936560-28936756]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28974506 29025806 + PPP1CB ENSG00000213639.5 28974506 0.77 0.98 2242 62250
chr2 29005383 29073477 + SPDYA ENSG00000163806.11 29005383 0.76 1.0 2243 31373
Expression level of Genes
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miRNAs possibly regulated by vista30855[chr2:28936560-28936756]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results