EnhancerDB
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  3. vista30856[chr2:28939068-28939564]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30856[chr2:28939068-28939564]
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Tissue distribution of vista30856
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Transcription factor that possibly regulate vista30856[chr2:28939068-28939564]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28939206 28939530 CEBPB UCSC Txn Factor no Conserved 108431649
chr2 28939216 28939496 JUND UCSC Txn Factor no Conserved 108431650
chr2 28939291 28939450 USF2 UCSC Txn Factor no Conserved 108431651
chr2 28939097 28939102 GATA2 JASPAR yes 22026021
chr2 28939097 28939102 GATA2 JASPAR yes 72672949
chr2 28939097 28939118 ZNF263 JASPAR yes 22026022
chr2 28939097 28939118 ZNF263 JASPAR yes 72672950
chr2 28939100 28939107 NKX3-1 JASPAR yes 22026023
chr2 28939100 28939107 NKX3-1 JASPAR yes 72672951
chr2 28939105 28939119 SPI1 JASPAR yes 22026024
chr2 28939105 28939119 SPIC JASPAR yes 22026025
chr2 28939105 28939119 SPI1 JASPAR yes 72672952
chr2 28939105 28939119 SPIC JASPAR yes 72672953
chr2 28939123 28939127 YY1 TRANSFAC yes 22026026
chr2 28939123 28939127 YY1 TRANSFAC yes 72672954
chr2 28939125 28939135 HOXD13 JASPAR yes 22026027
chr2 28939125 28939135 HOXD13 JASPAR yes 72672955
chr2 28939135 28939138 MYB TRANSFAC yes 22026028
chr2 28939135 28939138 MYB TRANSFAC yes 72672956
chr2 28939139 28939144 H4TF1 TRANSFAC yes 22026029
chr2 28939139 28939144 H4TF1 TRANSFAC yes 72672957
chr2 28939150 28939162 PROX1 JASPAR yes 22026030
chr2 28939150 28939162 PROX1 JASPAR yes 72672958
chr2 28939157 28939178 IRF1 JASPAR yes 22026031
chr2 28939157 28939178 IRF1 JASPAR yes 72672959
chr2 28939171 28939182 FOXB1 JASPAR yes 22026032
chr2 28939171 28939182 FOXB1 JASPAR yes 72672960
chr2 28939172 28939176 YY1 TRANSFAC yes 22026033
chr2 28939172 28939176 YY1 TRANSFAC yes 72672961
chr2 28939182 28939203 IRF1 JASPAR yes 22026034
chr2 28939182 28939203 IRF1 JASPAR yes 72672962
chr2 28939186 28939200 SPI1 JASPAR yes 22026035
chr2 28939186 28939200 SPI1 JASPAR yes 72672963
chr2 28939207 28939214 SPIB JASPAR yes 22026036
chr2 28939207 28939214 SPIB JASPAR yes 72672964
chr2 28939221 28939236 HSF1 JASPAR yes 22026037
chr2 28939221 28939236 HSF1 JASPAR yes 72672965
chr2 28939238 28939242 TEAD2 TRANSFAC yes 22026038
chr2 28939238 28939242 TEAD2 TRANSFAC yes 72672966
chr2 28939240 28939243 MYB TRANSFAC yes 22026039
chr2 28939240 28939243 MYB TRANSFAC yes 72672967
chr2 28939245 28939256 USF1 JASPAR yes 22026040
chr2 28939245 28939256 USF2 JASPAR yes 22026041
chr2 28939245 28939256 USF1 JASPAR yes 72672968
chr2 28939245 28939256 USF2 JASPAR yes 72672969
chr2 28939246 28939256 TFEC JASPAR yes 22026042
chr2 28939246 28939256 TFEC JASPAR yes 72672970
chr2 28939281 28939295 STAT1 JASPAR yes 22026043
chr2 28939281 28939295 STAT1 JASPAR yes 72672971
chr2 28939295 28939301 NFIC JASPAR yes 22026044
chr2 28939295 28939301 NFIC JASPAR yes 72672972
chr2 28939316 28939330 NR2F1 JASPAR yes 22026045
chr2 28939316 28939330 NR2F1 JASPAR yes 72672973
chr2 28939342 28939357 JUND JASPAR yes 22026046
chr2 28939342 28939357 JUND JASPAR yes 72672974
chr2 28939343 28939356 JUN JASPAR yes 22026047
chr2 28939343 28939356 JUN JASPAR yes 72672975
chr2 28939344 28939358 ATF7 JASPAR yes 22026048
chr2 28939344 28939358 BATF3 JASPAR yes 22026049
chr2 28939344 28939358 ATF7 JASPAR yes 72672976
chr2 28939344 28939358 BATF3 JASPAR yes 72672977
chr2 28939345 28939357 JDP2 JASPAR yes 22026050
chr2 28939345 28939357 JDP2 JASPAR yes 72672978
chr2 28939345 28939360 JUND JASPAR yes 22026051
chr2 28939345 28939360 JUND JASPAR yes 72672979
chr2 28939353 28939357 YY1 TRANSFAC yes 22026052
chr2 28939353 28939357 YY1 TRANSFAC yes 72672980
chr2 28939359 28939376 PAX9 JASPAR yes 22026053
chr2 28939359 28939376 PAX9 JASPAR yes 72672981
chr2 28939360 28939379 PAX5 JASPAR yes 22026054
chr2 28939360 28939379 PAX5 JASPAR yes 72672982
chr2 28939387 28939397 TFE3 JASPAR yes 22026055
chr2 28939387 28939397 TFEB JASPAR yes 22026056
chr2 28939387 28939397 TFE3 JASPAR yes 72672983
chr2 28939387 28939397 TFEB JASPAR yes 72672984
chr2 28939387 28939398 USF1 JASPAR yes 22026057
chr2 28939387 28939398 USF2 JASPAR yes 22026058
chr2 28939387 28939398 USF1 JASPAR yes 72672985
chr2 28939387 28939398 USF2 JASPAR yes 72672986
chr2 28939388 28939398 MAX JASPAR yes 22026059
chr2 28939388 28939398 MAX JASPAR yes 72672987
chr2 28939390 28939401 JUNB JASPAR yes 22026060
chr2 28939390 28939401 JUNB JASPAR yes 72672988
chr2 28939391 28939402 FOSL1 JASPAR yes 22026061
chr2 28939391 28939402 JUND JASPAR yes 22026062
chr2 28939391 28939402 FOSL1 JASPAR yes 72672989
chr2 28939391 28939402 JUND JASPAR yes 72672990
chr2 28939392 28939399 JUN TRANSFAC yes 22026063
chr2 28939392 28939399 JUN TRANSFAC yes 72672991
chr2 28939406 28939419 SMAD2 JASPAR yes 22026064
chr2 28939406 28939419 SMAD2 JASPAR yes 72672992
chr2 28939409 28939417 MEIS2 JASPAR yes 22026065
chr2 28939409 28939417 MEIS3 JASPAR yes 22026066
chr2 28939409 28939417 MEIS2 JASPAR yes 72672993
chr2 28939409 28939417 MEIS3 JASPAR yes 72672994
chr2 28939410 28939414 NFE TRANSFAC yes 22026067
chr2 28939410 28939414 NFE TRANSFAC yes 72672995
chr2 28939419 28939434 FOXP1 JASPAR yes 22026068
chr2 28939419 28939434 FOXP1 JASPAR yes 72672996
chr2 28939423 28939431 FOXO3 JASPAR yes 22026069
chr2 28939423 28939431 FOXO3 JASPAR yes 72672997
chr2 28939424 28939433 SRY JASPAR yes 22026070
chr2 28939424 28939433 SRY JASPAR yes 72672998
chr2 28939504 28939515 DMRT3 JASPAR yes 22026071
chr2 28939504 28939515 DMRT3 JASPAR yes 72672999
chr2 28939512 28939523 CDX2 JASPAR yes 22026072
chr2 28939512 28939523 CDX2 JASPAR yes 72673000
chr2 28939513 28939524 FOXH1 JASPAR yes 22026073
chr2 28939513 28939524 HOXA10 JASPAR yes 22026074
chr2 28939513 28939524 FOXH1 JASPAR yes 72673001
chr2 28939513 28939524 HOXA10 JASPAR yes 72673002
chr2 28939514 28939523 CDX1 JASPAR yes 22026075
chr2 28939514 28939523 CDX1 JASPAR yes 72673003
chr2 28939514 28939524 HOXA13 JASPAR yes 22026076
chr2 28939514 28939524 HOXA13 JASPAR yes 72673004
chr2 28939515 28939526 FOXP2 JASPAR yes 22026077
chr2 28939515 28939526 FOXP2 JASPAR yes 72673005
chr2 28939524 28939545 ZNF263 JASPAR yes 22026078
chr2 28939524 28939545 ZNF263 JASPAR yes 72673006
chr2 28939525 28939535 TBX21 JASPAR yes 22026079
chr2 28939525 28939535 TBX21 JASPAR yes 72673007
chr2 28939525 28939536 TBX20 JASPAR yes 22026080
chr2 28939525 28939536 TBX2 JASPAR yes 22026081
chr2 28939525 28939536 TBX20 JASPAR yes 72673008
chr2 28939525 28939536 TBX2 JASPAR yes 72673009
chr2 28939525 28939538 EOMES JASPAR yes 22026082
chr2 28939525 28939538 EOMES JASPAR yes 72673010
chr2 28939526 28939536 TBR1 JASPAR yes 22026083
chr2 28939526 28939536 TBR1 JASPAR yes 72673011
chr2 28939526 28939547 ZNF263 JASPAR yes 22026084
chr2 28939526 28939547 ZNF263 JASPAR yes 72673012
chr2 28939532 28939547 PRDM1 JASPAR yes 22026085
chr2 28939532 28939547 PRDM1 JASPAR yes 72673013
chr2 28939534 28939555 IRF1 JASPAR yes 22026086
chr2 28939534 28939555 IRF1 JASPAR yes 72673014
chr2 28939539 28939554 FOXP1 JASPAR yes 22026087
chr2 28939539 28939554 FOXP1 JASPAR yes 72673015
chr2 28939560 28939577 ZNF410 JASPAR yes 22026088
chr2 28939560 28939577 ZNF410 JASPAR yes 72673016
SNP sites on vista30856[chr2:28939068-28939564]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28939110 rs115584152 T C
SPI1 SPIC ZNF263
5611182
chr2 28939255 rs7596947 A G
CEBPB JUND TFEC USF1 USF2
5611183
chr2 28939328 rs141009485 T A
CEBPB JUND NR2F1 USF2
5611184
chr2 28939351 rs182047309 T C
ATF7 BATF3 CEBPB JDP2 JUN JUND USF2
5611185
Genes possibly regulated by vista30856[chr2:28939068-28939564]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28974506 29025806 + PPP1CB ENSG00000213639.5 28974506 0.77 0.98 2242 65058
chr2 29005383 29073477 + SPDYA ENSG00000163806.11 29005383 0.76 1.0 2243 34181
Expression level of Genes
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miRNAs possibly regulated by vista30856[chr2:28939068-28939564]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results