EnhancerDB
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  3. vista30858[chr2:28976141-28976573]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30858[chr2:28976141-28976573]
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Tissue distribution of vista30858
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Transcription factor that possibly regulate vista30858[chr2:28976141-28976573]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28976075 28976500 FOXA1 UCSC Txn Factor no Conserved 108431652
chr2 28976204 28976628 CTCF UCSC Txn Factor no Conserved 108431653
chr2 28976243 28976556 RAD21 UCSC Txn Factor no Conserved 108431654
chr2 28976269 28976546 SMC3 UCSC Txn Factor no Conserved 108431655
chr2 28976139 28976149 GBX2 JASPAR yes 22026198
chr2 28976139 28976149 GBX2 JASPAR yes 72676089
chr2 28976155 28976170 AR JASPAR yes 22026199
chr2 28976155 28976170 AR JASPAR yes 72676090
chr2 28976164 28976171 NKX3-1 JASPAR yes 22026200
chr2 28976164 28976171 NKX3-1 JASPAR yes 72676091
chr2 28976165 28976180 MEF2A JASPAR yes 22026201
chr2 28976165 28976180 MEF2A JASPAR yes 72676092
chr2 28976171 28976175 YY1 TRANSFAC yes 22026202
chr2 28976171 28976175 YY1 TRANSFAC yes 72676093
chr2 28976173 28976183 NFATC3 JASPAR yes 22026203
chr2 28976173 28976183 NFATC3 JASPAR yes 72676094
chr2 28976175 28976182 NFATC2 JASPAR yes 22026204
chr2 28976175 28976182 NFATC2 JASPAR yes 72676095
chr2 28976180 28976194 TCF7L2 JASPAR yes 22026205
chr2 28976180 28976194 TCF7L2 JASPAR yes 72676096
chr2 28976180 28976195 LEF1 JASPAR yes 22026206
chr2 28976180 28976195 LEF1 JASPAR yes 72676097
chr2 28976184 28976200 SOX8 JASPAR yes 22026207
chr2 28976184 28976200 SOX8 JASPAR yes 72676098
chr2 28976191 28976205 POU1F1 JASPAR yes 22026208
chr2 28976191 28976205 POU1F1 JASPAR yes 72676099
chr2 28976198 28976209 YY2 JASPAR yes 22026209
chr2 28976198 28976209 YY2 JASPAR yes 72676100
chr2 28976202 28976211 SP1 TRANSFAC yes 22026210
chr2 28976202 28976211 SP1 TRANSFAC yes 72676101
chr2 28976202 28976212 SP1 JASPAR yes 22026211
chr2 28976202 28976212 SP1 JASPAR yes 72676102
chr2 28976204 28976210 MAZ TRANSFAC yes 22026212
chr2 28976204 28976210 MAZ TRANSFAC yes 72676103
chr2 28976205 28976215 MZF1 JASPAR yes 22026213
chr2 28976205 28976215 MZF1 JASPAR yes 72676104
chr2 28976209 28976219 REL JASPAR yes 22026214
chr2 28976209 28976219 REL JASPAR yes 72676105
chr2 28976212 28976226 SPI1 JASPAR yes 22026215
chr2 28976212 28976226 SPI1 JASPAR yes 72676106
chr2 28976215 28976220 ETS2 TRANSFAC yes 22026216
chr2 28976215 28976220 ETS2 TRANSFAC yes 72676107
chr2 28976240 28976245 GATA1 TRANSFAC yes 22026217
chr2 28976240 28976245 GATA1 TRANSFAC yes 72676108
chr2 28976266 28976272 PTF TRANSFAC yes 22026218
chr2 28976266 28976272 PTF TRANSFAC yes 72676109
chr2 28976269 28976281 TEF JASPAR yes 22026219
chr2 28976269 28976281 TEF JASPAR yes 72676110
chr2 28976276 28976279 MYB TRANSFAC yes 22026220
chr2 28976276 28976279 MYB TRANSFAC yes 72676111
chr2 28976287 28976298 FOXH1 JASPAR yes 22026221
chr2 28976287 28976298 FOXH1 JASPAR yes 72676112
chr2 28976291 28976295 YY1 TRANSFAC yes 22026222
chr2 28976291 28976295 YY1 TRANSFAC yes 72676113
chr2 28976296 28976309 ZBTB18 JASPAR yes 22026223
chr2 28976296 28976309 ZBTB18 JASPAR yes 72676114
chr2 28976311 28976317 YY1 JASPAR yes 22026224
chr2 28976311 28976317 YY1 JASPAR yes 72676115
chr2 28976333 28976354 IRF1 JASPAR yes 22026225
chr2 28976333 28976354 IRF1 JASPAR yes 72676116
chr2 28976337 28976352 STAT2 JASPAR yes 22026226
chr2 28976337 28976352 STAT2 JASPAR yes 72676117
chr2 28976338 28976350 IRF1 JASPAR yes 22026227
chr2 28976338 28976350 IRF1 JASPAR yes 72676118
chr2 28976348 28976359 HOXC13 JASPAR yes 22026228
chr2 28976348 28976359 HOXC13 JASPAR yes 72676119
chr2 28976361 28976376 FOXA1 JASPAR yes 22026229
chr2 28976361 28976376 FOXA1 JASPAR yes 72676120
chr2 28976362 28976377 FOXP1 JASPAR yes 22026230
chr2 28976362 28976377 FOXP1 JASPAR yes 72676121
chr2 28976363 28976375 FOXC2 JASPAR yes 22026231
chr2 28976363 28976375 FOXC2 JASPAR yes 72676122
chr2 28976363 28976377 FOXF2 JASPAR yes 22026232
chr2 28976363 28976377 FOXF2 JASPAR yes 72676123
chr2 28976364 28976375 FOXB1 JASPAR yes 22026233
chr2 28976364 28976375 FOXC1 JASPAR yes 22026234
chr2 28976364 28976375 FOXB1 JASPAR yes 72676124
chr2 28976364 28976375 FOXC1 JASPAR yes 72676125
chr2 28976365 28976369 YY1 TRANSFAC yes 22026235
chr2 28976365 28976369 YY1 TRANSFAC yes 72676126
chr2 28976365 28976376 FOXA1 JASPAR yes 22026236
chr2 28976365 28976376 FOXA1 JASPAR yes 72676127
chr2 28976375 28976380 ETS2 TRANSFAC yes 22026237
chr2 28976375 28976380 ETS2 TRANSFAC yes 72676128
chr2 28976383 28976387 NFE TRANSFAC yes 22026238
chr2 28976383 28976387 NFE TRANSFAC yes 72676129
chr2 28976393 28976407 GLIS3 JASPAR yes 22026239
chr2 28976393 28976407 GLIS3 JASPAR yes 72676130
chr2 28976399 28976410 NFKB1 JASPAR yes 22026240
chr2 28976399 28976410 NFKB1 JASPAR yes 72676131
chr2 28976400 28976419 CTCF JASPAR yes 22026241
chr2 28976400 28976419 CTCF JASPAR yes 72676132
chr2 28976401 28976415 PLAG1 JASPAR yes 22026242
chr2 28976401 28976415 PLAG1 JASPAR yes 72676133
chr2 28976403 28976417 ZIC1 JASPAR yes 22026243
chr2 28976403 28976417 ZIC1 JASPAR yes 72676134
chr2 28976403 28976418 ZIC3 JASPAR yes 22026244
chr2 28976403 28976418 ZIC4 JASPAR yes 22026245
chr2 28976403 28976418 ZIC3 JASPAR yes 72676135
chr2 28976403 28976418 ZIC4 JASPAR yes 72676136
chr2 28976442 28976448 LEF1 TRANSFAC yes 22026246
chr2 28976442 28976448 SOX10 JASPAR yes 22026247
chr2 28976442 28976448 LEF1 TRANSFAC yes 72676137
chr2 28976442 28976448 SOX10 JASPAR yes 72676138
chr2 28976494 28976509 SOX21 JASPAR yes 22026248
chr2 28976494 28976509 SOX21 JASPAR yes 72676139
chr2 28976496 28976507 PHOX2A JASPAR yes 22026249
chr2 28976496 28976507 PROP1 JASPAR yes 22026250
chr2 28976496 28976507 PHOX2A JASPAR yes 72676140
chr2 28976496 28976507 PROP1 JASPAR yes 72676141
chr2 28976502 28976506 YY1 TRANSFAC yes 22026251
chr2 28976502 28976506 YY1 TRANSFAC yes 72676142
chr2 28976509 28976512 MYB TRANSFAC yes 22026252
chr2 28976509 28976512 MYB TRANSFAC yes 72676143
chr2 28976514 28976524 HOXA13 JASPAR yes 22026253
chr2 28976514 28976524 HOXB13 JASPAR yes 22026254
chr2 28976514 28976524 HOXC10 JASPAR yes 22026255
chr2 28976514 28976524 HOXD11 JASPAR yes 22026256
chr2 28976514 28976524 HOXD13 JASPAR yes 22026257
chr2 28976514 28976524 HOXA13 JASPAR yes 72676144
chr2 28976514 28976524 HOXB13 JASPAR yes 72676145
chr2 28976514 28976524 HOXC10 JASPAR yes 72676146
chr2 28976514 28976524 HOXD11 JASPAR yes 72676147
chr2 28976514 28976524 HOXD13 JASPAR yes 72676148
chr2 28976514 28976525 HOXC13 JASPAR yes 22026258
chr2 28976514 28976525 HOXD12 JASPAR yes 22026259
chr2 28976514 28976525 HOXC13 JASPAR yes 72676149
chr2 28976514 28976525 HOXD12 JASPAR yes 72676150
chr2 28976515 28976524 CDX1 JASPAR yes 22026260
chr2 28976515 28976524 CDX1 JASPAR yes 72676151
chr2 28976553 28976568 FOXA1 JASPAR yes 22026261
chr2 28976553 28976568 FOXA1 JASPAR yes 72676152
chr2 28976554 28976569 FOXP1 JASPAR yes 22026262
chr2 28976554 28976569 FOXP1 JASPAR yes 72676153
chr2 28976555 28976566 FOXP2 JASPAR yes 22026263
chr2 28976555 28976566 FOXP2 JASPAR yes 72676154
chr2 28976555 28976567 FOXC2 JASPAR yes 22026264
chr2 28976555 28976567 FOXC2 JASPAR yes 72676155
chr2 28976556 28976564 FOXD1 JASPAR yes 22026265
chr2 28976556 28976564 FOXG1 JASPAR yes 22026266
chr2 28976556 28976564 FOXO3 JASPAR yes 22026267
chr2 28976556 28976564 FOXD1 JASPAR yes 72676156
chr2 28976556 28976564 FOXG1 JASPAR yes 72676157
chr2 28976556 28976564 FOXO3 JASPAR yes 72676158
chr2 28976556 28976567 FOXB1 JASPAR yes 22026268
chr2 28976556 28976567 FOXC1 JASPAR yes 22026269
chr2 28976556 28976567 FOXB1 JASPAR yes 72676159
chr2 28976556 28976567 FOXC1 JASPAR yes 72676160
chr2 28976557 28976564 FOXD2 JASPAR yes 22026270
chr2 28976557 28976564 FOXI1 JASPAR yes 22026271
chr2 28976557 28976564 FOXL1 JASPAR yes 22026272
chr2 28976557 28976564 FOXO4 JASPAR yes 22026273
chr2 28976557 28976564 FOXO6 JASPAR yes 22026274
chr2 28976557 28976564 FOXP3 JASPAR yes 22026275
chr2 28976557 28976564 FOXD2 JASPAR yes 72676161
chr2 28976557 28976564 FOXI1 JASPAR yes 72676162
chr2 28976557 28976564 FOXL1 JASPAR yes 72676163
chr2 28976557 28976564 FOXO4 JASPAR yes 72676164
chr2 28976557 28976564 FOXO6 JASPAR yes 72676165
chr2 28976557 28976564 FOXP3 JASPAR yes 72676166
chr2 28976557 28976565 FOXO3 JASPAR yes 22026276
chr2 28976557 28976565 FOXO3 JASPAR yes 72676167
chr2 28976557 28976568 FOXA1 JASPAR yes 22026277
chr2 28976557 28976568 FOXA1 JASPAR yes 72676168
chr2 28976563 28976567 YY1 TRANSFAC yes 22026278
chr2 28976563 28976567 YY1 TRANSFAC yes 72676169
chr2 28976568 28976573 ETS2 TRANSFAC yes 22026279
chr2 28976568 28976573 ETS2 TRANSFAC yes 72676170
SNP sites on vista30858[chr2:28976141-28976573]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28976215 rs551400264 A G
CTCF ETS2 FOXA1 MZF1 REL SPI1
5611474
chr2 28976403 rs4665434 A G
CTCF FOXA1 GLIS3 NFKB1 PLAG1 RAD21 SMC3 ZIC1 ZIC3 ZIC4
5611475
chr2 28976438 rs201444870 TAAGA T
CTCF FOXA1 RAD21 SMC3
5611476
chr2 28976513 rs538981217 CTG C
CTCF RAD21 SMC3
5611477
Genes possibly regulated by vista30858[chr2:28976141-28976573]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28974506 29025806 + PPP1CB ENSG00000213639.5 28974506 0.77 0.98 2242 98365
chr2 29005383 29073477 + SPDYA ENSG00000163806.11 29005383 0.76 1.0 2243 71190
Expression level of Genes
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miRNAs possibly regulated by vista30858[chr2:28976141-28976573]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results