EnhancerDB
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  3. vista30859[chr2:28991945-28992473]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30859[chr2:28991945-28992473]
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Tissue distribution of vista30859
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Transcription factor that possibly regulate vista30859[chr2:28991945-28992473]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 28991953 28991963 BARHL2 JASPAR yes 22026280
chr2 28991953 28991963 BARHL2 JASPAR yes 72677896
chr2 28991961 28991965 NFE TRANSFAC yes 22026281
chr2 28991961 28991965 NFE TRANSFAC yes 72677897
chr2 28991974 28991984 PAX7 JASPAR yes 22026282
chr2 28991974 28991984 PAX7 JASPAR yes 72677898
chr2 28991979 28991983 YY1 TRANSFAC yes 22026283
chr2 28991979 28991983 YY1 TRANSFAC yes 72677899
chr2 28991985 28991996 STAT1 JASPAR yes 22026284
chr2 28991985 28991996 STAT1 JASPAR yes 72677900
chr2 28992001 28992013 PBX1 JASPAR yes 22026285
chr2 28992001 28992013 PBX1 JASPAR yes 72677901
chr2 28992008 28992014 YY1 JASPAR yes 22026286
chr2 28992008 28992014 YY1 JASPAR yes 72677902
chr2 28992018 28992022 NFE TRANSFAC yes 22026287
chr2 28992018 28992022 NFE TRANSFAC yes 72677903
chr2 28992022 28992027 USF2 TRANSFAC yes 22026288
chr2 28992022 28992027 USF2 TRANSFAC yes 72677904
chr2 28992072 28992093 IRF1 JASPAR yes 22026289
chr2 28992072 28992093 IRF1 JASPAR yes 72677905
chr2 28992076 28992091 FOXP1 JASPAR yes 22026290
chr2 28992076 28992091 FOXP1 JASPAR yes 72677906
chr2 28992085 28992097 IRF1 JASPAR yes 22026291
chr2 28992085 28992097 IRF1 JASPAR yes 72677907
chr2 28992101 28992115 POU4F1 JASPAR yes 22026292
chr2 28992101 28992115 POU4F1 JASPAR yes 72677908
chr2 28992102 28992116 POU4F1 JASPAR yes 22026293
chr2 28992102 28992116 POU4F1 JASPAR yes 72677909
chr2 28992104 28992119 FOXA1 JASPAR yes 22026294
chr2 28992104 28992119 FOXA1 JASPAR yes 72677910
chr2 28992105 28992117 FOXI1 JASPAR yes 22026295
chr2 28992105 28992117 FOXI1 JASPAR yes 72677911
chr2 28992105 28992120 FOXP1 JASPAR yes 22026296
chr2 28992105 28992120 FOXP1 JASPAR yes 72677912
chr2 28992106 28992118 FOXC2 JASPAR yes 22026297
chr2 28992106 28992118 FOXC2 JASPAR yes 72677913
chr2 28992106 28992120 FOXF2 JASPAR yes 22026298
chr2 28992106 28992120 ONECUT3 JASPAR yes 22026299
chr2 28992106 28992120 FOXF2 JASPAR yes 72677914
chr2 28992106 28992120 ONECUT3 JASPAR yes 72677915
chr2 28992107 28992118 FOXB1 JASPAR yes 22026300
chr2 28992107 28992118 FOXC1 JASPAR yes 22026301
chr2 28992107 28992118 FOXB1 JASPAR yes 72677916
chr2 28992107 28992118 FOXC1 JASPAR yes 72677917
chr2 28992108 28992112 YY1 TRANSFAC yes 22026302
chr2 28992108 28992112 YY1 TRANSFAC yes 72677918
chr2 28992108 28992119 FOXA1 JASPAR yes 22026303
chr2 28992108 28992119 FOXA1 JASPAR yes 72677919
chr2 28992108 28992123 MEF2A JASPAR yes 22026304
chr2 28992108 28992123 MEF2A JASPAR yes 72677920
chr2 28992109 28992124 MEF2C JASPAR yes 22026305
chr2 28992109 28992124 MEF2C JASPAR yes 72677921
chr2 28992110 28992122 MEF2A JASPAR yes 22026306
chr2 28992110 28992122 MEF2D JASPAR yes 22026307
chr2 28992110 28992122 MEF2A JASPAR yes 72677922
chr2 28992110 28992122 MEF2D JASPAR yes 72677923
chr2 28992112 28992116 YY1 TRANSFAC yes 22026308
chr2 28992112 28992116 YY1 TRANSFAC yes 72677924
chr2 28992158 28992168 SREBF1 JASPAR yes 22026309
chr2 28992158 28992168 SREBF2 JASPAR yes 22026310
chr2 28992158 28992168 SREBF1 JASPAR yes 72677925
chr2 28992158 28992168 SREBF2 JASPAR yes 72677926
chr2 28992163 28992171 NR4A2 JASPAR yes 22026311
chr2 28992163 28992171 NR4A2 JASPAR yes 72677927
chr2 28992169 28992183 TLX1 JASPAR yes 22026312
chr2 28992169 28992183 TLX1 JASPAR yes 72677928
chr2 28992174 28992177 MYB TRANSFAC yes 22026313
chr2 28992174 28992177 MYB TRANSFAC yes 72677929
chr2 28992239 28992255 T JASPAR yes 22026314
chr2 28992239 28992255 T JASPAR yes 72677930
chr2 28992243 28992255 HES5 JASPAR yes 22026315
chr2 28992243 28992255 HES7 JASPAR yes 22026316
chr2 28992243 28992255 PKNOX2 JASPAR yes 22026317
chr2 28992243 28992255 HES5 JASPAR yes 72677931
chr2 28992243 28992255 HES7 JASPAR yes 72677932
chr2 28992243 28992255 PKNOX2 JASPAR yes 72677933
chr2 28992243 28992263 TP63 JASPAR yes 22026318
chr2 28992243 28992263 TP63 JASPAR yes 72677934
chr2 28992244 28992262 TP73 JASPAR yes 22026319
chr2 28992244 28992262 TP73 JASPAR yes 72677935
chr2 28992254 28992273 PAX5 JASPAR yes 22026320
chr2 28992254 28992273 PAX5 JASPAR yes 72677936
chr2 28992262 28992277 MEF2A JASPAR yes 22026321
chr2 28992262 28992277 MEF2A JASPAR yes 72677937
chr2 28992263 28992278 MEF2C JASPAR yes 22026322
chr2 28992263 28992278 MEF2C JASPAR yes 72677938
chr2 28992270 28992285 MEF2A JASPAR yes 22026323
chr2 28992270 28992285 MEF2A JASPAR yes 72677939
chr2 28992271 28992286 MEF2C JASPAR yes 22026324
chr2 28992271 28992286 MEF2C JASPAR yes 72677940
chr2 28992272 28992284 MEF2A JASPAR yes 22026325
chr2 28992272 28992284 MEF2B JASPAR yes 22026326
chr2 28992272 28992284 MEF2D JASPAR yes 22026327
chr2 28992272 28992284 MEF2A JASPAR yes 72677941
chr2 28992272 28992284 MEF2B JASPAR yes 72677942
chr2 28992272 28992284 MEF2D JASPAR yes 72677943
chr2 28992274 28992278 YY1 TRANSFAC yes 22026328
chr2 28992274 28992278 YY1 TRANSFAC yes 72677944
chr2 28992285 28992295 SP1 JASPAR yes 22026329
chr2 28992285 28992295 SP1 JASPAR yes 72677945
chr2 28992295 28992307 YY1 JASPAR yes 22026330
chr2 28992295 28992307 YY1 JASPAR yes 72677946
chr2 28992302 28992322 PPARG JASPAR yes 22026331
chr2 28992302 28992322 PPARG JASPAR yes 72677947
chr2 28992305 28992325 ESR1 JASPAR yes 22026332
chr2 28992305 28992325 ESR1 JASPAR yes 72677948
chr2 28992306 28992310 ESR1 TRANSFAC yes 22026333
chr2 28992306 28992310 ESR1 TRANSFAC yes 72677949
chr2 28992323 28992338 MEF2A JASPAR yes 22026334
chr2 28992323 28992338 MEF2A JASPAR yes 72677950
chr2 28992325 28992337 MEF2A JASPAR yes 22026335
chr2 28992325 28992337 MEF2D JASPAR yes 22026336
chr2 28992325 28992337 MEF2A JASPAR yes 72677951
chr2 28992325 28992337 MEF2D JASPAR yes 72677952
chr2 28992330 28992343 HSF1 JASPAR yes 22026337
chr2 28992330 28992343 HSF2 JASPAR yes 22026338
chr2 28992330 28992343 HSF1 JASPAR yes 72677953
chr2 28992330 28992343 HSF2 JASPAR yes 72677954
chr2 28992338 28992343 GATA2 JASPAR yes 22026339
chr2 28992338 28992343 GATA2 JASPAR yes 72677955
chr2 28992387 28992398 NRL JASPAR yes 22026340
chr2 28992387 28992398 NRL JASPAR yes 72677956
chr2 28992387 28992402 MAFK JASPAR yes 22026341
chr2 28992387 28992402 MAFK JASPAR yes 72677957
chr2 28992393 28992411 MAFF JASPAR yes 22026342
chr2 28992393 28992411 MAFF JASPAR yes 72677958
chr2 28992395 28992406 NRL JASPAR yes 22026343
chr2 28992395 28992406 NRL JASPAR yes 72677959
chr2 28992395 28992410 MAFK JASPAR yes 22026344
chr2 28992395 28992410 MAFK JASPAR yes 72677960
chr2 28992403 28992419 SOX8 JASPAR yes 22026345
chr2 28992403 28992419 SOX8 JASPAR yes 72677961
chr2 28992420 28992436 SOX4 JASPAR yes 22026346
chr2 28992420 28992436 SOX4 JASPAR yes 72677962
chr2 28992429 28992435 SOX10 JASPAR yes 22026347
chr2 28992429 28992435 SOX10 JASPAR yes 72677963
chr2 28992447 28992450 MYB TRANSFAC yes 22026348
chr2 28992447 28992450 MYB TRANSFAC yes 72677964
chr2 28992449 28992463 GATA2 JASPAR yes 22026349
chr2 28992449 28992463 TCF7L2 JASPAR yes 22026350
chr2 28992449 28992463 GATA2 JASPAR yes 72677965
chr2 28992449 28992463 TCF7L2 JASPAR yes 72677966
chr2 28992449 28992464 LEF1 JASPAR yes 22026351
chr2 28992449 28992464 LEF1 JASPAR yes 72677967
chr2 28992451 28992459 GATA3 JASPAR yes 22026352
chr2 28992451 28992459 GATA3 JASPAR yes 72677968
SNP sites on vista30859[chr2:28991945-28992473]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 28992000 rs115500914 A G no 5611655
chr2 28992004 rs12472549 T C
PBX1
5611656
chr2 28992020 rs11127189 T G
NFE
5611657
chr2 28992035 rs145834345 T C no 5611658
chr2 28992060 rs540789818 TG T no 5611659
chr2 28992135 rs186981691 C T no 5611660
chr2 28992195 rs13397993 C T no 5611661
chr2 28992261 rs149607671 C G
PAX5 TP63 TP73
5611662
chr2 28992281 rs112974667 T C
MEF2A MEF2B MEF2C MEF2D
5611663
chr2 28992293 rs12714243 G A
SP1
5611664
chr2 28992405 rs11686412 A G
MAFF MAFK NRL SOX8
5611665
Genes possibly regulated by vista30859[chr2:28991945-28992473]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28974506 29025806 + PPP1CB ENSG00000213639.5 28974506 0.77 0.98 2242 82561
chr2 29005383 29073477 + SPDYA ENSG00000163806.11 29005383 0.76 1.0 2243 87090
Expression level of Genes
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miRNAs possibly regulated by vista30859[chr2:28991945-28992473]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results