EnhancerDB
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  3. vista30862[chr2:29050679-29050871]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30862[chr2:29050679-29050871]
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Tissue distribution of vista30862
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Transcription factor that possibly regulate vista30862[chr2:29050679-29050871]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 29050694 29050698 NFE TRANSFAC yes 22026415
chr2 29050704 29050708 YY1 TRANSFAC yes 22026416
chr2 29050710 29050714 NFE TRANSFAC yes 22026417
chr2 29050737 29050742 MYB TRANSFAC yes 22026418
chr2 29050753 29050762 SRY JASPAR yes 22026419
chr2 29050782 29050786 H1TF2 TRANSFAC yes 22026420
chr2 29050782 29050786 NFE TRANSFAC yes 22026421
chr2 29050782 29050786 SRF TRANSFAC yes 22026422
chr2 29050822 29050837 FOXA1 JASPAR yes 22026423
chr2 29050823 29050835 FOXI1 JASPAR yes 22026424
chr2 29050823 29050838 FOXP1 JASPAR yes 22026425
chr2 29050824 29050835 FOXP2 JASPAR yes 22026426
chr2 29050824 29050836 FOXC2 JASPAR yes 22026427
chr2 29050824 29050838 FOXF2 JASPAR yes 22026428
chr2 29050825 29050833 FOXG1 JASPAR yes 22026429
chr2 29050826 29050837 FOXA1 JASPAR yes 22026430
chr2 29050827 29050848 IRF1 JASPAR yes 22026431
chr2 29050830 29050834 YY1 TRANSFAC yes 22026432
chr2 29050838 29050859 IRF1 JASPAR yes 22026433
chr2 29050839 29050860 IRF1 JASPAR yes 22026434
chr2 29050840 29050844 YY1 TRANSFAC yes 22026435
chr2 29050840 29050855 FOXP1 JASPAR yes 22026436
chr2 29050840 29050861 IRF1 JASPAR yes 22026437
chr2 29050841 29050862 IRF1 JASPAR yes 22026438
chr2 29050845 29050860 FOXP1 JASPAR yes 22026439
chr2 29050845 29050860 LEF1 JASPAR yes 22026440
chr2 29050845 29050866 IRF1 JASPAR yes 22026441
chr2 29050846 29050867 IRF1 JASPAR yes 22026442
chr2 29050847 29050862 FOXP1 JASPAR yes 22026443
chr2 29050847 29050868 IRF1 JASPAR yes 22026444
chr2 29050848 29050869 IRF1 JASPAR yes 22026445
chr2 29050852 29050867 FOXP1 JASPAR yes 22026446
chr2 29050852 29050867 LEF1 JASPAR yes 22026447
chr2 29050854 29050869 FOXP1 JASPAR yes 22026448
SNP sites on vista30862[chr2:29050679-29050871]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 29050696 rs182449015 T C
NFE
5611758
Genes possibly regulated by vista30862[chr2:29050679-29050871]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28974506 29025806 + PPP1CB ENSG00000213639.5 28974506 0.77 0.98 2242 23827
chr2 29005383 29073477 + SPDYA ENSG00000163806.11 29005383 0.76 1.0 2243 54704
chr2 29072687 29093167 - TRMT61B ENSG00000171103.6 29093167 0.57 0.99 2244 57704
chr2 29117509 29171088 + WDR43 ENSG00000163811.7 29117509 0.78 0.99 2245 33362
Expression level of Genes
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miRNAs possibly regulated by vista30862[chr2:29050679-29050871]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results