EnhancerDB
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  3. vista30864[chr2:29060448-29060640]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30864[chr2:29060448-29060640]
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Tissue distribution of vista30864
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Transcription factor that possibly regulate vista30864[chr2:29060448-29060640]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 29060449 29060465 POU4F2 JASPAR yes 22026473
chr2 29060449 29060465 POU4F3 JASPAR yes 22026474
chr2 29060451 29060465 POU4F1 JASPAR yes 22026475
chr2 29060452 29060466 POU4F1 JASPAR yes 22026476
chr2 29060452 29060468 POU4F3 JASPAR yes 22026477
chr2 29060461 29060464 MYB TRANSFAC yes 22026478
chr2 29060471 29060486 LEF1 JASPAR yes 22026479
chr2 29060489 29060499 REL JASPAR yes 22026480
chr2 29060496 29060510 GATA2 JASPAR yes 22026481
chr2 29060498 29060506 GATA3 JASPAR yes 22026482
chr2 29060498 29060506 GATA5 JASPAR yes 22026483
chr2 29060510 29060515 ETS2 TRANSFAC yes 22026484
chr2 29060511 29060526 AR JASPAR yes 22026485
chr2 29060532 29060546 TCF7L2 JASPAR yes 22026486
chr2 29060536 29060542 TCF1 TRANSFAC yes 22026487
chr2 29060551 29060558 NKX3-1 JASPAR yes 22026488
chr2 29060576 29060596 ESR1 JASPAR yes 22026489
chr2 29060585 29060598 SMAD2 JASPAR yes 22026490
chr2 29060602 29060623 IRF1 JASPAR yes 22026491
chr2 29060604 29060625 IRF1 JASPAR yes 22026492
chr2 29060605 29060626 IRF1 JASPAR yes 22026493
chr2 29060606 29060627 IRF1 JASPAR yes 22026494
chr2 29060607 29060622 FOXP1 JASPAR yes 22026495
chr2 29060607 29060628 IRF1 JASPAR yes 22026496
chr2 29060608 29060623 FOXP1 JASPAR yes 22026497
chr2 29060608 29060629 IRF1 JASPAR yes 22026498
chr2 29060609 29060624 FOXP1 JASPAR yes 22026499
chr2 29060609 29060630 IRF1 JASPAR yes 22026500
chr2 29060610 29060625 FOXP1 JASPAR yes 22026501
chr2 29060610 29060631 IRF1 JASPAR yes 22026502
chr2 29060611 29060626 FOXP1 JASPAR yes 22026503
chr2 29060612 29060627 FOXP1 JASPAR yes 22026504
chr2 29060613 29060628 FOXP1 JASPAR yes 22026505
chr2 29060613 29060634 IRF1 JASPAR yes 22026506
chr2 29060614 29060629 FOXP1 JASPAR yes 22026507
chr2 29060614 29060635 IRF1 JASPAR yes 22026508
chr2 29060615 29060630 FOXP1 JASPAR yes 22026509
chr2 29060615 29060636 IRF1 JASPAR yes 22026510
chr2 29060616 29060631 FOXP1 JASPAR yes 22026511
chr2 29060617 29060632 FOXP1 JASPAR yes 22026512
chr2 29060618 29060633 FOXP1 JASPAR yes 22026513
SNP sites on vista30864[chr2:29060448-29060640]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 29060484 rs148689501 T G
LEF1
5611759
chr2 29060608 rs201687264 CTTTTTTTTTTTTT C
FOXP1 IRF1
5611760
chr2 29060608 rs539732628 CTTTTTTTTTTTTT C
FOXP1 IRF1
5611761
chr2 29060608 rs757020090 CTTTTTTTTTTTTT C
FOXP1 IRF1
5611762
chr2 29060630 rs61226201 T A
FOXP1 IRF1
5611763
Genes possibly regulated by vista30864[chr2:29060448-29060640]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 28974506 29025806 + PPP1CB ENSG00000213639.5 28974506 0.77 0.98 2242 14058
chr2 29005383 29073477 + SPDYA ENSG00000163806.11 29005383 0.76 1.0 2243 44935
chr2 29072687 29093167 - TRMT61B ENSG00000171103.6 29093167 0.57 0.99 2244 67473
chr2 29117509 29171088 + WDR43 ENSG00000163811.7 29117509 0.78 0.99 2245 43131
Expression level of Genes
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miRNAs possibly regulated by vista30864[chr2:29060448-29060640]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results