EnhancerDB
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  3. vista30868[chr2:29223437-29223646]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30868[chr2:29223437-29223646]
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Tissue distribution of vista30868
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Transcription factor that possibly regulate vista30868[chr2:29223437-29223646]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 29223294 29223730 MAX UCSC Txn Factor no Conserved 108431659
chr2 29223361 29223639 SPI1 UCSC Txn Factor no Conserved 108431660
chr2 29223382 29223646 USF1 UCSC Txn Factor no Conserved 108431661
chr2 29223453 29223456 MYB TRANSFAC yes 22026696
chr2 29223465 29223477 PROX1 JASPAR yes 22026697
chr2 29223484 29223505 IRF1 JASPAR yes 22026698
chr2 29223488 29223502 SPI1 JASPAR yes 22026699
chr2 29223488 29223502 SPIC JASPAR yes 22026700
chr2 29223488 29223503 STAT2 JASPAR yes 22026701
chr2 29223492 29223502 ETV6 JASPAR yes 22026702
chr2 29223494 29223499 ETS2 TRANSFAC yes 22026703
chr2 29223510 29223520 MAX JASPAR yes 22026704
chr2 29223510 29223521 USF2 JASPAR yes 22026705
chr2 29223510 29223522 HES5 JASPAR yes 22026706
chr2 29223510 29223522 HES7 JASPAR yes 22026707
chr2 29223511 29223521 BHLHE40 JASPAR yes 22026708
chr2 29223511 29223521 CLOCK JASPAR yes 22026709
chr2 29223511 29223521 HEY1 JASPAR yes 22026710
chr2 29223511 29223521 HEY2 JASPAR yes 22026711
chr2 29223511 29223521 MAX JASPAR yes 22026712
chr2 29223511 29223521 MLXIPL JASPAR yes 22026713
chr2 29223511 29223521 MLX JASPAR yes 22026714
chr2 29223511 29223521 MNT JASPAR yes 22026715
chr2 29223511 29223521 TFE3 JASPAR yes 22026716
chr2 29223511 29223521 TFEB JASPAR yes 22026717
chr2 29223512 29223522 MAX JASPAR yes 22026718
chr2 29223513 29223518 MYC TRANSFAC yes 22026719
chr2 29223513 29223518 USF1 TRANSFAC yes 22026720
chr2 29223513 29223518 USF2 TRANSFAC yes 22026721
chr2 29223513 29223520 USF1 JASPAR yes 22026722
chr2 29223532 29223544 INSM1 JASPAR yes 22026723
chr2 29223534 29223554 RREB1 JASPAR yes 22026724
chr2 29223536 29223551 RUNX2 JASPAR yes 22026725
chr2 29223540 29223550 RUNX3 JASPAR yes 22026726
chr2 29223541 29223550 RUNX2 JASPAR yes 22026727
chr2 29223556 29223566 MZF1 JASPAR yes 22026728
chr2 29223559 29223565 SP1 TRANSFAC yes 22026729
chr2 29223559 29223569 SP1 JASPAR yes 22026730
chr2 29223564 29223583 REST JASPAR yes 22026731
chr2 29223568 29223582 MTF1 JASPAR yes 22026732
chr2 29223576 29223595 CTCF JASPAR yes 22026733
chr2 29223580 29223590 FIGLA JASPAR yes 22026734
chr2 29223580 29223590 TCF3 JASPAR yes 22026735
chr2 29223581 29223590 SNAI2 JASPAR yes 22026736
chr2 29223582 29223587 USF2 TRANSFAC yes 22026737
chr2 29223591 29223610 REST JASPAR yes 22026738
chr2 29223596 29223611 TFAP2C JASPAR yes 22026739
chr2 29223597 29223608 EBF1 JASPAR yes 22026740
chr2 29223603 29223618 ZIC3 JASPAR yes 22026741
chr2 29223603 29223618 ZIC4 JASPAR yes 22026742
chr2 29223603 29223619 GLIS1 JASPAR yes 22026743
chr2 29223604 29223618 ZIC1 JASPAR yes 22026744
SNP sites on vista30868[chr2:29223437-29223646]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 29223533 rs151004768 A G
INSM1 MAX SPI1 USF1
5612256
Genes possibly regulated by vista30868[chr2:29223437-29223646]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 29179477 29284239 + FAM179A ENSG00000189350.8 29179477 0.82 0.97 2246 56040
chr2 29283842 29297127 - C2orf71 ENSG00000179270.6 29297127 0.9 0.0 2247 26519
chr2 29320571 29412509 + CLIP4 ENSG00000115295.15 29320571 0.71 1.0 2248 3075
Expression level of Genes
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miRNAs possibly regulated by vista30868[chr2:29223437-29223646]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results