EnhancerDB
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  3. vista30873[chr2:29349196-29349466]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30873[chr2:29349196-29349466]
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Tissue distribution of vista30873
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Transcription factor that possibly regulate vista30873[chr2:29349196-29349466]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 29349223 29349227 YY1 TRANSFAC yes 22026966
chr2 29349223 29349227 YY1 TRANSFAC yes 72691021
chr2 29349224 29349233 PITX3 JASPAR yes 22026967
chr2 29349224 29349233 PITX3 JASPAR yes 72691022
chr2 29349225 29349233 OTX1 JASPAR yes 22026968
chr2 29349225 29349233 OTX2 JASPAR yes 22026969
chr2 29349225 29349233 OTX1 JASPAR yes 72691023
chr2 29349225 29349233 OTX2 JASPAR yes 72691024
chr2 29349230 29349241 FOSL1 JASPAR yes 22026970
chr2 29349230 29349241 FOSL1 JASPAR yes 72691025
chr2 29349231 29349244 DUXA JASPAR yes 22026971
chr2 29349231 29349244 DUXA JASPAR yes 72691026
chr2 29349232 29349243 BATF JASPAR yes 22026972
chr2 29349232 29349243 DUX4 JASPAR yes 22026973
chr2 29349232 29349243 BATF JASPAR yes 72691027
chr2 29349232 29349243 DUX4 JASPAR yes 72691028
chr2 29349244 29349257 ZBTB18 JASPAR yes 22026974
chr2 29349244 29349257 ZBTB18 JASPAR yes 72691029
chr2 29349248 29349253 MYC TRANSFAC yes 22026975
chr2 29349248 29349253 MYC TRANSFAC yes 72691030
chr2 29349263 29349267 LFA1 TRANSFAC yes 22026976
chr2 29349263 29349267 LFA1 TRANSFAC yes 72691031
chr2 29349267 29349282 FOXA1 JASPAR yes 22026977
chr2 29349267 29349282 FOXA1 JASPAR yes 72691032
chr2 29349268 29349280 FOXI1 JASPAR yes 22026978
chr2 29349268 29349280 FOXI1 JASPAR yes 72691033
chr2 29349268 29349283 FOXP1 JASPAR yes 22026979
chr2 29349268 29349283 FOXP1 JASPAR yes 72691034
chr2 29349269 29349278 SRY JASPAR yes 22026980
chr2 29349269 29349278 SRY JASPAR yes 72691035
chr2 29349269 29349280 FOXP2 JASPAR yes 22026981
chr2 29349269 29349280 FOXP2 JASPAR yes 72691036
chr2 29349269 29349281 FOXC2 JASPAR yes 22026982
chr2 29349269 29349281 FOXC2 JASPAR yes 72691037
chr2 29349270 29349278 FOXG1 JASPAR yes 22026983
chr2 29349270 29349278 FOXO3 JASPAR yes 22026984
chr2 29349270 29349278 FOXG1 JASPAR yes 72691038
chr2 29349270 29349278 FOXO3 JASPAR yes 72691039
chr2 29349270 29349281 FOXB1 JASPAR yes 22026985
chr2 29349270 29349281 FOXC1 JASPAR yes 22026986
chr2 29349270 29349281 FOXB1 JASPAR yes 72691040
chr2 29349270 29349281 FOXC1 JASPAR yes 72691041
chr2 29349283 29349287 NFE TRANSFAC yes 22026987
chr2 29349283 29349287 NFE TRANSFAC yes 72691042
chr2 29349283 29349304 ZNF263 JASPAR yes 22026988
chr2 29349283 29349304 ZNF263 JASPAR yes 72691043
chr2 29349284 29349289 GATA2 JASPAR yes 22026989
chr2 29349284 29349289 GATA2 JASPAR yes 72691044
chr2 29349289 29349295 LEF1 TRANSFAC yes 22026990
chr2 29349289 29349295 SOX10 JASPAR yes 22026991
chr2 29349289 29349295 LEF1 TRANSFAC yes 72691045
chr2 29349289 29349295 SOX10 JASPAR yes 72691046
chr2 29349290 29349305 STAT2 JASPAR yes 22026992
chr2 29349290 29349305 STAT2 JASPAR yes 72691047
chr2 29349304 29349308 TEAD2 TRANSFAC yes 22026993
chr2 29349304 29349308 TEAD2 TRANSFAC yes 72691048
chr2 29349304 29349309 TBP TRANSFAC yes 22026994
chr2 29349304 29349309 TBP TRANSFAC yes 72691049
chr2 29349304 29349310 TFIID TRANSFAC yes 22026995
chr2 29349304 29349310 TFIID TRANSFAC yes 72691050
chr2 29349315 29349324 SRY JASPAR yes 22026996
chr2 29349315 29349324 SRY JASPAR yes 72691051
chr2 29349317 29349320 MYB TRANSFAC yes 22026997
chr2 29349317 29349320 MYB TRANSFAC yes 72691052
chr2 29349317 29349326 SOX9 JASPAR yes 22026998
chr2 29349317 29349326 SOX9 JASPAR yes 72691053
chr2 29349329 29349347 SRF JASPAR yes 22026999
chr2 29349329 29349347 SRF JASPAR yes 72691054
chr2 29349330 29349342 SRF JASPAR yes 22027000
chr2 29349330 29349342 SRF JASPAR yes 72691055
chr2 29349349 29349359 GSC2 JASPAR yes 22027001
chr2 29349349 29349359 GSC2 JASPAR yes 72691056
chr2 29349350 29349358 OTX1 JASPAR yes 22027002
chr2 29349350 29349358 OTX2 JASPAR yes 22027003
chr2 29349350 29349358 OTX1 JASPAR yes 72691057
chr2 29349350 29349358 OTX2 JASPAR yes 72691058
chr2 29349355 29349366 PHOX2A JASPAR yes 22027004
chr2 29349355 29349366 PROP1 JASPAR yes 22027005
chr2 29349355 29349366 PHOX2A JASPAR yes 72691059
chr2 29349355 29349366 PROP1 JASPAR yes 72691060
chr2 29349368 29349383 HNF4A JASPAR yes 22027006
chr2 29349368 29349383 HNF4A JASPAR yes 72691061
chr2 29349372 29349378 SOX10 JASPAR yes 22027007
chr2 29349372 29349378 SOX10 JASPAR yes 72691062
chr2 29349382 29349402 TP53 JASPAR yes 22027008
chr2 29349382 29349402 TP53 JASPAR yes 72691063
chr2 29349406 29349415 NKX3-2 JASPAR yes 22027009
chr2 29349406 29349415 NKX3-2 JASPAR yes 72691064
chr2 29349407 29349415 ISL2 JASPAR yes 22027010
chr2 29349407 29349415 ISL2 JASPAR yes 72691065
chr2 29349421 29349424 MYB TRANSFAC yes 22027011
chr2 29349421 29349424 MYB TRANSFAC yes 72691066
chr2 29349427 29349436 SRY JASPAR yes 22027012
chr2 29349427 29349436 SRY JASPAR yes 72691067
chr2 29349430 29349442 POU2F1 JASPAR yes 22027013
chr2 29349430 29349442 POU2F1 JASPAR yes 72691068
chr2 29349430 29349443 POU3F3 JASPAR yes 22027014
chr2 29349430 29349443 POU3F3 JASPAR yes 72691069
chr2 29349430 29349444 POU1F1 JASPAR yes 22027015
chr2 29349430 29349444 POU1F1 JASPAR yes 72691070
chr2 29349431 29349443 POU3F1 JASPAR yes 22027016
chr2 29349431 29349443 POU3F2 JASPAR yes 22027017
chr2 29349431 29349443 POU3F1 JASPAR yes 72691071
chr2 29349431 29349443 POU3F2 JASPAR yes 72691072
chr2 29349432 29349436 YY1 TRANSFAC yes 22027018
chr2 29349432 29349436 YY1 TRANSFAC yes 72691073
chr2 29349432 29349441 POU5F1B JASPAR yes 22027019
chr2 29349432 29349441 POU5F1B JASPAR yes 72691074
chr2 29349458 29349462 LFA1 TRANSFAC yes 22027020
chr2 29349458 29349462 LFA1 TRANSFAC yes 72691075
chr2 29349461 29349465 YY1 TRANSFAC yes 22027021
chr2 29349461 29349465 YY1 TRANSFAC yes 72691076
SNP sites on vista30873[chr2:29349196-29349466]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 29349226 rs2339420 T G
OTX1 OTX2 PITX3 YY1
5613155
chr2 29349419 rs144840218 G A no 5613156
Genes possibly regulated by vista30873[chr2:29349196-29349466]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 29283842 29297127 - C2orf71 ENSG00000179270.6 29297127 0.9 0.0 2247 47931
chr2 29320571 29412509 + CLIP4 ENSG00000115295.15 29320571 0.71 1.0 2248 71375
Expression level of Genes
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miRNAs possibly regulated by vista30873[chr2:29349196-29349466]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results