EnhancerDB
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  3. vista30874[chr2:29352302-29352469]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30874[chr2:29352302-29352469]
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Tissue distribution of vista30874
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Transcription factor that possibly regulate vista30874[chr2:29352302-29352469]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 29352312 29352324 FOXI1 JASPAR yes 22027022
chr2 29352326 29352337 SMAD4 TRANSFAC yes 22027023
chr2 29352345 29352354 LEF1 TRANSFAC yes 22027024
chr2 29352345 29352363 IRF2 JASPAR yes 22027025
chr2 29352346 29352367 IRF1 JASPAR yes 22027026
chr2 29352348 29352363 PRDM1 JASPAR yes 22027027
chr2 29352348 29352363 STAT2 JASPAR yes 22027028
chr2 29352350 29352362 IRF1 JASPAR yes 22027029
chr2 29352355 29352359 YY1 TRANSFAC yes 22027030
chr2 29352369 29352381 PKNOX2 JASPAR yes 22027031
chr2 29352371 29352381 MAX JASPAR yes 22027032
chr2 29352377 29352387 GSX2 JASPAR yes 22027033
chr2 29352377 29352387 HESX1 JASPAR yes 22027034
chr2 29352377 29352387 LBX2 JASPAR yes 22027035
chr2 29352377 29352387 MIXL1 JASPAR yes 22027036
chr2 29352377 29352387 MNX1 JASPAR yes 22027037
chr2 29352377 29352387 RAX JASPAR yes 22027038
chr2 29352378 29352386 ISX JASPAR yes 22027039
chr2 29352378 29352386 LHX9 JASPAR yes 22027040
chr2 29352378 29352386 LMX1B JASPAR yes 22027041
chr2 29352378 29352386 PRRX1 JASPAR yes 22027042
chr2 29352378 29352386 RAX2 JASPAR yes 22027043
chr2 29352378 29352386 SHOX JASPAR yes 22027044
chr2 29352378 29352386 UNCX JASPAR yes 22027045
chr2 29352378 29352392 POU1F1 JASPAR yes 22027046
chr2 29352379 29352391 POU3F1 JASPAR yes 22027047
chr2 29352379 29352391 POU3F2 JASPAR yes 22027048
chr2 29352379 29352392 POU3F3 JASPAR yes 22027049
chr2 29352380 29352392 POU2F1 JASPAR yes 22027050
chr2 29352392 29352398 SOX10 JASPAR yes 22027051
chr2 29352392 29352410 NFYA JASPAR yes 22027052
chr2 29352395 29352411 NFYA JASPAR yes 22027053
chr2 29352398 29352412 ONECUT3 JASPAR yes 22027054
chr2 29352398 29352413 NFYB JASPAR yes 22027055
chr2 29352408 29352412 TEAD2 TRANSFAC yes 22027056
chr2 29352408 29352413 TBP TRANSFAC yes 22027057
chr2 29352408 29352414 TFIID TRANSFAC yes 22027058
chr2 29352455 29352466 ESRRB JASPAR yes 22027059
SNP sites on vista30874[chr2:29352302-29352469]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 29352305 rs539168856 A G no 5613195
chr2 29352313 rs539884603 G C
FOXI1
5613196
chr2 29352325 rs114406203 A G no 5613197
chr2 29352377 rs147131657 T C
GSX2 HESX1 LBX2 MAX MIXL1 MNX1 PKNOX2 RAX
5613198
chr2 29352420 rs141058068 C G no 5613199
Genes possibly regulated by vista30874[chr2:29352302-29352469]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 29283842 29297127 - C2orf71 ENSG00000179270.6 29297127 0.9 0.0 2247 44825
chr2 29320571 29412509 + CLIP4 ENSG00000115295.15 29320571 0.71 1.0 2248 68269
Expression level of Genes
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miRNAs possibly regulated by vista30874[chr2:29352302-29352469]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results