EnhancerDB
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  3. vista30898[chr2:30141215-30141484]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista30898[chr2:30141215-30141484]
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Tissue distribution of vista30898
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Transcription factor that possibly regulate vista30898[chr2:30141215-30141484]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 30141225 30141234 HIC2 JASPAR yes 22028087
chr2 30141228 30141232 LFA1 TRANSFAC yes 22028088
chr2 30141253 30141257 TEAD2 TRANSFAC yes 22028089
chr2 30141253 30141258 TBP TRANSFAC yes 22028090
chr2 30141255 30141270 RUNX2 JASPAR yes 22028091
chr2 30141256 30141265 RUNX2 JASPAR yes 22028092
chr2 30141256 30141266 RUNX3 JASPAR yes 22028093
chr2 30141256 30141267 RUNX1 JASPAR yes 22028094
chr2 30141256 30141276 RREB1 JASPAR yes 22028095
chr2 30141257 30141277 RREB1 JASPAR yes 22028096
chr2 30141262 30141279 ZNF410 JASPAR yes 22028097
chr2 30141264 30141279 RUNX2 JASPAR yes 22028098
chr2 30141265 30141274 RUNX2 JASPAR yes 22028099
chr2 30141265 30141275 RUNX3 JASPAR yes 22028100
chr2 30141265 30141276 RUNX1 JASPAR yes 22028101
chr2 30141277 30141281 YY1 TRANSFAC yes 22028102
chr2 30141283 30141296 ZBTB18 JASPAR yes 22028103
chr2 30141284 30141296 NHLH1 JASPAR yes 22028104
chr2 30141285 30141295 MSC JASPAR yes 22028105
chr2 30141285 30141295 TFAP4 JASPAR yes 22028106
chr2 30141285 30141297 TAL1 JASPAR yes 22028107
chr2 30141320 30141336 SOX4 JASPAR yes 22028108
chr2 30141321 30141336 SOX21 JASPAR yes 22028109
chr2 30141358 30141362 NFE TRANSFAC yes 22028110
chr2 30141393 30141397 TEAD2 TRANSFAC yes 22028111
chr2 30141393 30141398 TBP TRANSFAC yes 22028112
chr2 30141393 30141399 TMF TRANSFAC yes 22028113
chr2 30141414 30141430 E2F2 JASPAR yes 22028114
chr2 30141444 30141447 MYB TRANSFAC yes 22028115
chr2 30141447 30141455 HOXA5 JASPAR yes 22028116
chr2 30141451 30141462 CEBPA JASPAR yes 22028117
SNP sites on vista30898[chr2:30141215-30141484]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 30141398 rs145889475 A G
TBP TMF
5617219
chr2 30141432 rs142329623 G A no 5617220
chr2 30141438 rs145946489 G A no 5617221
chr2 30141450 rs538181181 C A
HOXA5
5617222
chr2 30141474 rs74545623 C T no 5617223
Genes possibly regulated by vista30898[chr2:30141215-30141484]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 29415640 30144432 - ALK ENSG00000171094.11 30144432 0.87 0.97 2249 97052
Expression level of Genes
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miRNAs possibly regulated by vista30898[chr2:30141215-30141484]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results