EnhancerDB
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  3. vista309[chr1:9760502-9760837]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista309[chr1:9760502-9760837]
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Tissue distribution of vista309
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Transcription factor that possibly regulate vista309[chr1:9760502-9760837]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 9760493 9760512 CTCF JASPAR yes 26670932
chr1 9760493 9760512 CTCF JASPAR yes 118227744
chr1 9760499 9760520 ZNF263 JASPAR yes 26670933
chr1 9760499 9760520 ZNF263 JASPAR yes 118227745
chr1 9760500 9760511 TBX20 JASPAR yes 26670934
chr1 9760500 9760511 TBX20 JASPAR yes 118227746
chr1 9760500 9760518 RARA JASPAR yes 26670935
chr1 9760500 9760518 RARA JASPAR yes 118227747
chr1 9760501 9760509 TBX15 JASPAR yes 26670936
chr1 9760501 9760509 TBX15 JASPAR yes 118227748
chr1 9760501 9760512 E2F6 JASPAR yes 26670937
chr1 9760501 9760512 E2F6 JASPAR yes 118227749
chr1 9760502 9760507 SP1 TRANSFAC yes 26670938
chr1 9760502 9760507 SP1 TRANSFAC yes 118227750
chr1 9760505 9760510 ETS2 TRANSFAC yes 26670939
chr1 9760505 9760510 ETS2 TRANSFAC yes 118227751
chr1 9760506 9760521 PRDM1 JASPAR yes 26670940
chr1 9760506 9760521 PRDM1 JASPAR yes 118227752
chr1 9760506 9760524 IRF2 JASPAR yes 26670941
chr1 9760506 9760524 IRF2 JASPAR yes 118227753
chr1 9760507 9760522 LEF1 JASPAR yes 26670942
chr1 9760507 9760522 LEF1 JASPAR yes 118227754
chr1 9760515 9760520 ETS2 TRANSFAC yes 26670943
chr1 9760515 9760520 ETS2 TRANSFAC yes 118227755
chr1 9760530 9760535 GATA2 JASPAR yes 26670944
chr1 9760530 9760535 GATA2 JASPAR yes 118227756
chr1 9760531 9760550 RFX2 JASPAR yes 26670945
chr1 9760531 9760550 RFX2 JASPAR yes 118227757
chr1 9760535 9760551 RFX3 JASPAR yes 26670946
chr1 9760535 9760551 RFX4 JASPAR yes 26670947
chr1 9760535 9760551 RFX3 JASPAR yes 118227758
chr1 9760535 9760551 RFX4 JASPAR yes 118227759
chr1 9760538 9760543 ETS2 TRANSFAC yes 26670948
chr1 9760538 9760543 ETS2 TRANSFAC yes 118227760
chr1 9760542 9760556 POU4F1 JASPAR yes 26670949
chr1 9760542 9760556 POU4F1 JASPAR yes 118227761
chr1 9760542 9760558 POU4F2 JASPAR yes 26670950
chr1 9760542 9760558 POU4F3 JASPAR yes 26670951
chr1 9760542 9760558 POU4F2 JASPAR yes 118227762
chr1 9760542 9760558 POU4F3 JASPAR yes 118227763
chr1 9760544 9760549 GATA2 JASPAR yes 26670952
chr1 9760544 9760549 GATA2 JASPAR yes 118227764
chr1 9760547 9760551 YY1 TRANSFAC yes 26670953
chr1 9760547 9760551 YY1 TRANSFAC yes 118227765
chr1 9760548 9760558 HOXA13 JASPAR yes 26670954
chr1 9760548 9760558 HOXB13 JASPAR yes 26670955
chr1 9760548 9760558 HOXC10 JASPAR yes 26670956
chr1 9760548 9760558 HOXD11 JASPAR yes 26670957
chr1 9760548 9760558 HOXD13 JASPAR yes 26670958
chr1 9760548 9760558 HOXA13 JASPAR yes 118227766
chr1 9760548 9760558 HOXB13 JASPAR yes 118227767
chr1 9760548 9760558 HOXC10 JASPAR yes 118227768
chr1 9760548 9760558 HOXD11 JASPAR yes 118227769
chr1 9760548 9760558 HOXD13 JASPAR yes 118227770
chr1 9760548 9760559 HOXA10 JASPAR yes 26670959
chr1 9760548 9760559 HOXC11 JASPAR yes 26670960
chr1 9760548 9760559 HOXC12 JASPAR yes 26670961
chr1 9760548 9760559 HOXC13 JASPAR yes 26670962
chr1 9760548 9760559 HOXD12 JASPAR yes 26670963
chr1 9760548 9760559 HOXA10 JASPAR yes 118227771
chr1 9760548 9760559 HOXC11 JASPAR yes 118227772
chr1 9760548 9760559 HOXC12 JASPAR yes 118227773
chr1 9760548 9760559 HOXC13 JASPAR yes 118227774
chr1 9760548 9760559 HOXD12 JASPAR yes 118227775
chr1 9760549 9760558 CDX1 JASPAR yes 26670964
chr1 9760549 9760558 CDX1 JASPAR yes 118227776
chr1 9760549 9760560 CDX2 JASPAR yes 26670965
chr1 9760549 9760560 CDX2 JASPAR yes 118227777
chr1 9760595 9760606 BATF JASPAR yes 26670966
chr1 9760595 9760606 BATF JASPAR yes 118227778
chr1 9760596 9760607 FOSL2 JASPAR yes 26670967
chr1 9760596 9760607 JUNB JASPAR yes 26670968
chr1 9760596 9760607 FOSL2 JASPAR yes 118227779
chr1 9760596 9760607 JUNB JASPAR yes 118227780
chr1 9760596 9760617 ZNF263 JASPAR yes 26670969
chr1 9760596 9760617 ZNF263 JASPAR yes 118227781
chr1 9760597 9760608 FOS JASPAR yes 26670970
chr1 9760597 9760608 FOS JASPAR yes 118227782
chr1 9760599 9760605 JUN TRANSFAC yes 26670971
chr1 9760599 9760605 JUN TRANSFAC yes 118227783
chr1 9760608 9760615 CEBPA TRANSFAC yes 26670972
chr1 9760608 9760615 CEBPA TRANSFAC yes 118227784
chr1 9760615 9760620 NFY TRANSFAC yes 26670973
chr1 9760615 9760620 NFY TRANSFAC yes 118227785
chr1 9760619 9760623 ESR1 TRANSFAC yes 26670974
chr1 9760619 9760623 ESR1 TRANSFAC yes 118227786
chr1 9760622 9760627 MYC TRANSFAC yes 26670975
chr1 9760622 9760627 MYC TRANSFAC yes 118227787
chr1 9760631 9760643 HNF1B JASPAR yes 26670976
chr1 9760631 9760643 HNF1B JASPAR yes 118227788
chr1 9760634 9760646 CREB1 JASPAR yes 26670977
chr1 9760634 9760646 CREB1 JASPAR yes 118227789
chr1 9760634 9760652 ESR1 JASPAR yes 26670978
chr1 9760634 9760652 ESR1 JASPAR yes 118227790
chr1 9760676 9760685 ZEB1 JASPAR yes 26670979
chr1 9760676 9760685 ZEB1 JASPAR yes 118227791
chr1 9760679 9760684 USF2 TRANSFAC yes 26670980
chr1 9760679 9760684 USF2 TRANSFAC yes 118227792
chr1 9760682 9760688 NFE2 TRANSFAC yes 26670981
chr1 9760682 9760688 NFE2 TRANSFAC yes 118227793
chr1 9760685 9760691 SP1 TRANSFAC yes 26670982
chr1 9760685 9760691 SP1 TRANSFAC yes 118227794
chr1 9760685 9760695 SP1 JASPAR yes 26670983
chr1 9760685 9760695 SP1 JASPAR yes 118227795
chr1 9760698 9760711 ZBTB18 JASPAR yes 26670984
chr1 9760698 9760711 ZBTB18 JASPAR yes 118227796
chr1 9760704 9760708 NFE TRANSFAC yes 26670985
chr1 9760704 9760708 NFE TRANSFAC yes 118227797
chr1 9760712 9760723 NRL JASPAR yes 26670986
chr1 9760712 9760723 NRL JASPAR yes 118227798
chr1 9760712 9760733 MAFG JASPAR yes 26670987
chr1 9760712 9760733 MAFG JASPAR yes 118227799
chr1 9760732 9760736 NFE TRANSFAC yes 26670988
chr1 9760732 9760736 NFE TRANSFAC yes 118227800
chr1 9760737 9760743 SP1 TRANSFAC yes 26670989
chr1 9760737 9760743 SP1 TRANSFAC yes 118227801
chr1 9760737 9760747 SP1 JASPAR yes 26670990
chr1 9760737 9760747 SP1 JASPAR yes 118227802
chr1 9760739 9760744 SP1 TRANSFAC yes 26670991
chr1 9760739 9760744 SP1 TRANSFAC yes 118227803
chr1 9760740 9760755 NR2C2 JASPAR yes 26670992
chr1 9760740 9760755 NR2C2 JASPAR yes 118227804
chr1 9760742 9760753 E2F6 JASPAR yes 26670993
chr1 9760742 9760753 E2F6 JASPAR yes 118227805
chr1 9760745 9760753 TBX15 JASPAR yes 26670994
chr1 9760745 9760753 TBX15 JASPAR yes 118227806
chr1 9760745 9760754 ZEB1 JASPAR yes 26670995
chr1 9760745 9760754 ZEB1 JASPAR yes 118227807
chr1 9760746 9760756 TCF4 JASPAR yes 26670996
chr1 9760746 9760756 TCF4 JASPAR yes 118227808
chr1 9760748 9760753 USF2 TRANSFAC yes 26670997
chr1 9760748 9760753 USF2 TRANSFAC yes 118227809
chr1 9760752 9760757 TFAP2A TRANSFAC yes 26670998
chr1 9760752 9760757 TFAP2A TRANSFAC yes 118227810
chr1 9760752 9760758 MZF1 JASPAR yes 26670999
chr1 9760752 9760758 MZF1 JASPAR yes 118227811
chr1 9760773 9760787 CREB3L1 JASPAR yes 26671000
chr1 9760773 9760787 CREB3L1 JASPAR yes 118227812
chr1 9760782 9760797 HNF1A JASPAR yes 26671001
chr1 9760782 9760797 HNF1A JASPAR yes 118227813
chr1 9760789 9760793 YY1 TRANSFAC yes 26671002
chr1 9760789 9760793 YY1 TRANSFAC yes 118227814
chr1 9760793 9760805 NHLH1 JASPAR yes 26671003
chr1 9760793 9760805 NHLH1 JASPAR yes 118227815
chr1 9760794 9760804 NHLH1 JASPAR yes 26671004
chr1 9760794 9760804 NHLH1 JASPAR yes 118227816
chr1 9760807 9760811 YY1 TRANSFAC yes 26671005
chr1 9760807 9760811 YY1 TRANSFAC yes 118227817
chr1 9760832 9760836 NFE TRANSFAC yes 26671006
chr1 9760832 9760836 NFE TRANSFAC yes 118227818
SNP sites on vista309[chr1:9760502-9760837]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 9760643 rs149109035 C T
CREB1 ESR1 HNF1B
67630
chr1 9760651 rs12566637 C T
ESR1
67631
chr1 9760673 rs538130058 G C no 67632
chr1 9760737 rs577784690 C A
SP1
67633
chr1 9760765 rs74444368 C T no 67634
Genes possibly regulated by vista309[chr1:9760502-9760837]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 9711790 9789172 + PIK3CD ENSG00000171608.11 9711790 0.85 1.0 126 51288
chr1 9712668 9714644 - C1orf200 ENSG00000179840.5 9714644 0.96 1.0 127 54142
Expression level of Genes
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miRNAs possibly regulated by vista309[chr1:9760502-9760837]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results